BP915773
Clone id YMU001_000076_F08
Library
Length 531
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000076_F08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CATGGGGAAAATGTGCAACCTCTAAAGAAATGGTACAAAATCCATGATACAGATACAGAT
CATATGCACAACCGGGTTTCCAAAAATTGAGCACCAGAGGTGACTTTGACGTAAGGCCTT
TTCATAGATGTACGACTGGATGGGCACACTATCCCAAATCGGGCGGCTCGACACATACCA
AAAACGTAGCACACCAGAGCTGGAAATTATACAATATGGGGTGTGATCCTAAGCACCGTT
AATCTGCCCATAATACCTCTGCATAGTAACAAAACCAAGATCAGTGATGAGGAGGTGAAG
AATACCTCATTTCGATGATCCACTGAGGACCTCAGTCGGTGGAAGAAGGGGACTGTCAAG
CTGGTAAAGGTTCAGTGCAGGGCCGACAAACCGAAACGCGATCCAACCTCCCACGATCAC
TAAAATTGCAGCATAGGCAATCTTGTTCAGCCAGAAAAGGGCTCCCTTTTCACCAACGTA
AATTTCCCATGCCTTCTCTGCGAGAGTCATGGACTCCCAATCCTTCGGCGG
■■Homology search results ■■ -
sp_hit_id Q3ZBJ8
Definition sp|Q3ZBJ8|MFRN1_BOVIN Mitoferrin-1 OS=Bos taurus
Align length 65
Score (bit) 34.3
E-value 0.35
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915773|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_F08.
(515 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3ZBJ8|MFRN1_BOVIN Mitoferrin-1 OS=Bos taurus GN=SLC25A37 PE=... 34 0.35
sp|Q66H23|MFRN1_RAT Mitoferrin-1 OS=Rattus norvegicus GN=Slc25a3... 33 0.79
sp|Q920G8|MFRN1_MOUSE Mitoferrin-1 OS=Mus musculus GN=Slc25a37 P... 33 0.79
sp|Q9NYZ2|MFRN1_HUMAN Mitoferrin-1 OS=Homo sapiens GN=SLC25A37 P... 33 0.79
sp|P36048|SN114_YEAST 114 kDa U5 small nuclear ribonucleoprotein... 33 1.0
sp|Q5UQE0|YR476_MIMIV Putative AAA family ATPase R476 OS=Acantha... 32 1.3
sp|Q5HQ52|CTAA_STAEQ Heme A synthase OS=Staphylococcus epidermid... 32 1.8
sp|Q8CPM2|CTAA_STAES Heme A synthase OS=Staphylococcus epidermid... 32 2.3
sp|Q8VXB5|HAK8_ORYSJ Putative potassium transporter 8 OS=Oryza s... 30 5.1
sp|P46324|YVRN_BACSU Uncharacterized ABC transporter permease yv... 30 8.7

>sp|Q3ZBJ8|MFRN1_BOVIN Mitoferrin-1 OS=Bos taurus GN=SLC25A37 PE=2
SV=1
Length = 171

Score = 34.3 bits (77), Expect = 0.35
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2

Query: 329 EGDCQAGKGSVQGRQTETRSNLPRSLKLQHRQSCSARKGLPFHQRKFPMPSLR---ESWT 499
+GD + G G + +E NLP S L + A G+ H +P+ S++ +S
Sbjct: 18 DGDSRDGGGGCKDAGSEDYENLPTSASLSTHMTAGAMAGILEHSVMYPVDSVKTRMQSLN 77

Query: 500 PNPSA 514
P+P A
Sbjct: 78 PDPKA 82


>sp|Q66H23|MFRN1_RAT Mitoferrin-1 OS=Rattus norvegicus GN=Slc25a37
PE=2 SV=1
Length = 338

Score = 33.1 bits (74), Expect = 0.79
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2

Query: 329 EGDCQAGKGSVQGRQTETRSNLPRSLKLQHRQSCSARKGLPFHQRKFPMPSLR---ESWT 499
+GDC+ G + +E NLP S + + A G+ H +P+ S++ +S
Sbjct: 18 DGDCRDGGCGSKDAGSEDYENLPTSASVSTHMTAGAMAGILEHSIMYPVDSVKTRMQSLN 77

Query: 500 PNPSA 514
P+P A
Sbjct: 78 PDPKA 82


>sp|Q920G8|MFRN1_MOUSE Mitoferrin-1 OS=Mus musculus GN=Slc25a37 PE=2
SV=1
Length = 338

Score = 33.1 bits (74), Expect = 0.79
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2

Query: 329 EGDCQAGKGSVQGRQTETRSNLPRSLKLQHRQSCSARKGLPFHQRKFPMPSLR---ESWT 499
+GDC+ G + +E NLP S + + A G+ H +P+ S++ +S
Sbjct: 18 DGDCRDGGCGSKDAGSEDYENLPTSASVSTHMTAGAMAGILEHSIMYPVDSVKTRMQSLN 77

Query: 500 PNPSA 514
P+P A
Sbjct: 78 PDPKA 82


>sp|Q9NYZ2|MFRN1_HUMAN Mitoferrin-1 OS=Homo sapiens GN=SLC25A37 PE=1
SV=2
Length = 338

Score = 33.1 bits (74), Expect = 0.79
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2

Query: 329 EGDCQAGKGSVQGRQTETRSNLPRSLKLQHRQSCSARKGLPFHQRKFPMPSLR---ESWT 499
+GD + G G +E NLP S + + A G+ H +P+ S++ +S +
Sbjct: 18 DGDSRDGGGGKDATGSEDYENLPTSASVSTHMTAGAMAGILEHSVMYPVDSVKTRMQSLS 77

Query: 500 PNPSA 514
P+P A
Sbjct: 78 PDPKA 82


>sp|P36048|SN114_YEAST 114 kDa U5 small nuclear ribonucleoprotein
component OS=Saccharomyces cerevisiae GN=SNU114 PE=1
SV=1
Length = 1008

Score = 32.7 bits (73), Expect = 1.0
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3

Query: 75 APEVTLT*GLFIDVRLDGHTIPNRAARHIPKT*HTRAGNYTIWGVILSTVNLPII-PLHS 251
+P+ L + +L HTI + ++IPKT + R ++ + +N+ +I PLHS
Sbjct: 85 SPQTPLVEPVTERTKLQEHTIFTQLKKNIPKTRYNRDYMLSMANIPERIINVGVIGPLHS 144

Query: 252 NKTKISD 272
KT + D
Sbjct: 145 GKTSLMD 151


>sp|Q5UQE0|YR476_MIMIV Putative AAA family ATPase R476
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R476 PE=3
SV=1
Length = 855

Score = 32.3 bits (72), Expect = 1.3
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3

Query: 141 NRAARHIPKT*HTRAGNYTIWGVILSTVNLPIIPLHSNKTKISDEEVKNTSF-R*STEDL 317
N++ H+ K YT +G+I S N+ +P +NK+ + + V+ T + ++L
Sbjct: 511 NKSKNHLDKI----KKKYTTYGIITSNTNIKFVPAKANKSYVINNSVEQTEISKNPVQEL 566

Query: 318 SRWKKGTVKLVKVQCR 365
++ G K ++ R
Sbjct: 567 EKYVGGISKELETVVR 582


>sp|Q5HQ52|CTAA_STAEQ Heme A synthase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=ctaA PE=3 SV=1
Length = 302

Score = 32.0 bits (71), Expect = 1.8
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = -2

Query: 397 WEVGSRFGLSALH*TFTSLTVPFFHRLRSSVDHRNEVFFTSSSLILVLLLCRGIMGRLTV 218
W S G++ + TF + + F H +++ D+R + ++S ILV+L + I G L+V
Sbjct: 209 WVQFSHRGMALI--TFIWIMITFIHAIKNYSDNRTVRYGYTASFILVIL--QVITGALSV 264

Query: 217 L-RITPHIV*FPAL-VCYVFGM 158
+ + I F AL + Y+FGM
Sbjct: 265 ITNVNLIIALFHALFITYLFGM 286


>sp|Q8CPM2|CTAA_STAES Heme A synthase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=ctaA PE=3 SV=1
Length = 302

Score = 31.6 bits (70), Expect = 2.3
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = -2

Query: 397 WEVGSRFGLSALH*TFTSLTVPFFHRLRSSVDHRNEVFFTSSSLILVLLLCRGIMGRLTV 218
W S G++ + TF + + F H +++ D+R + ++S ILV+L + I G L+V
Sbjct: 209 WVQFSHRGMAFI--TFIWIMITFIHAIKNYSDNRTVRYGYTASFILVIL--QVITGALSV 264

Query: 217 L-RITPHIV*FPAL-VCYVFGM 158
+ + I F AL + Y+FGM
Sbjct: 265 ITNVNLIIALFHALFITYLFGM 286


>sp|Q8VXB5|HAK8_ORYSJ Putative potassium transporter 8 OS=Oryza
sativa subsp. japonica GN=HAK8 PE=3 SV=2
Length = 793

Score = 30.4 bits (67), Expect = 5.1
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = -2

Query: 388 GSRFGLSALH*TF-----TSLTVPFFHRLRSSVDHRNEVFFTSSSLILVLLLCRGIMGRL 224
G F LS H + T + + F L+ HR V F + ++L L+C +G
Sbjct: 180 GLEFSLSKDHREYAVIPITCVILAFLFALQHYGTHR--VGFLFAPIVLAWLICMSALGLY 237

Query: 223 TVLRITPHIV*FPAL-VCYVFGMCRAAR 143
++ PH+ + AL CY+F + R
Sbjct: 238 NIIHWNPHV--YQALNPCYMFKFLKKTR 263


>sp|P46324|YVRN_BACSU Uncharacterized ABC transporter permease yvrN
OS=Bacillus subtilis GN=yvrN PE=3 SV=2
Length = 416

Score = 29.6 bits (65), Expect = 8.7
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -2

Query: 289 VFFTSSSLILVLLLCRGIMGRLTVLRITPHIV*FPALV-CYVFGMCRAARFGIVCPSSRT 113
V TS IL +L GI LTV+ P IV PA+V +F M FG++ PS +
Sbjct: 346 VVLTSIGGILGVLAGFGIAKLLTVIFPMPFIVSIPAVVGALIFSMAVGIIFGLL-PSIKA 404

Query: 112 SMKRP 98
S +P
Sbjct: 405 SKLQP 409


tr_hit_id A9SQL7
Definition tr|A9SQL7|A9SQL7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 73
Score (bit) 116.0
E-value 6.0e-25
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915773|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_F08.
(515 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SQL7|A9SQL7_PHYPA Predicted protein OS=Physcomitrella paten... 116 6e-25
tr|B7FLL9|B7FLL9_MEDTR Putative uncharacterized protein OS=Medic... 115 1e-24
tr|A7QDZ1|A7QDZ1_VITVI Chromosome chr4 scaffold_83, whole genome... 112 8e-24
tr|Q8LDU3|Q8LDU3_ARATH Putative uncharacterized protein OS=Arabi... 109 9e-23
tr|Q8S8K0|Q8S8K0_ARATH Expressed protein (Putative uncharacteriz... 108 1e-22
tr|Q5Z9P9|Q5Z9P9_ORYSJ Os06g0715200 protein OS=Oryza sativa subs... 108 2e-22
tr|B6TLH7|B6TLH7_MAIZE Putative uncharacterized protein OS=Zea m... 108 2e-22
tr|A2YGZ6|A2YGZ6_ORYSI Putative uncharacterized protein OS=Oryza... 108 2e-22
tr|A9NKY5|A9NKY5_PICSI Putative uncharacterized protein OS=Picea... 104 2e-21
tr|B6T6P1|B6T6P1_MAIZE Putative uncharacterized protein OS=Zea m... 103 4e-21
tr|A8I5G0|A8I5G0_CHLRE Predicted protein OS=Chlamydomonas reinha... 87 4e-16
tr|Q00SS6|Q00SS6_OSTTA Chromosome 18 contig 1, DNA sequence OS=O... 61 4e-08
tr|A4S9R5|A4S9R5_OSTLU Predicted protein OS=Ostreococcus lucimar... 59 2e-07
tr|A5B5L4|A5B5L4_VITVI Putative uncharacterized protein OS=Vitis... 53 1e-05
tr|Q1ZMM7|Q1ZMM7_9VIBR Thymidylate synthase OS=Vibrio angustum S... 35 1.7
tr|A9HFH1|A9HFH1_GLUDA 2-oxoglutarate dehydrogenase E3 component... 35 2.9
tr|B2MVX8|B2MVX8_SHEEP SLC25A37 OS=Ovis aries PE=2 SV=1 34 3.7
tr|Q8J3E7|Q8J3E7_9HIV1 Gp120 protein (Fragment) OS=Human immunod... 34 4.9
tr|Q2JM89|Q2JM89_SYNJB Putative uncharacterized protein OS=Synec... 34 4.9
tr|A0YWE9|A0YWE9_9CYAN Putative uncharacterized protein OS=Lyngb... 33 8.3

>tr|A9SQL7|A9SQL7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_166191 PE=4 SV=1
Length = 237

Score = 116 bits (291), Expect = 6e-25
Identities = 48/73 (65%), Positives = 63/73 (86%)
Frame = -1

Query: 515 PPKDWESMTLAEKAWEIYVGEKGALFWLNKIAYAAILVIVGGWIAFRFVGPALNLYQLDS 336
P K W+ M+LAEKAW++Y+GE+GALFWLNK AYA+I +I+GGWI FRFVGPAL Y+L S
Sbjct: 111 PAKAWDDMSLAEKAWQLYIGEEGALFWLNKAAYASIFIIIGGWIVFRFVGPALGWYELSS 170

Query: 335 PLLPPTEVLSGSS 297
PLLPP +V++G++
Sbjct: 171 PLLPPEQVIAGTA 183


>tr|B7FLL9|B7FLL9_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 183

Score = 115 bits (289), Expect = 1e-24
Identities = 52/72 (72%), Positives = 60/72 (83%)
Frame = -1

Query: 512 PKDWESMTLAEKAWEIYVGEKGALFWLNKIAYAAILVIVGGWIAFRFVGPALNLYQLDSP 333
PK WE M+ EKA E+YVGEKGALFWLNK AYA+I +++G WIAFRFVGPALN+YQLD P
Sbjct: 112 PKKWEDMSFTEKALELYVGEKGALFWLNKFAYASIFIMIGLWIAFRFVGPALNIYQLDQP 171

Query: 332 LLPPTEVLSGSS 297
LL P +VL GSS
Sbjct: 172 LLSPEDVLKGSS 183


>tr|A7QDZ1|A7QDZ1_VITVI Chromosome chr4 scaffold_83, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00036793001
PE=4 SV=1
Length = 178

Score = 112 bits (281), Expect = 8e-24
Identities = 49/72 (68%), Positives = 59/72 (81%)
Frame = -1

Query: 515 PPKDWESMTLAEKAWEIYVGEKGALFWLNKIAYAAILVIVGGWIAFRFVGPALNLYQLDS 336
PPKDW+ M++ EKA E+YVGEKGALFWLNK AYA+I +++G WI FRFVGPALNLYQLDS
Sbjct: 107 PPKDWKDMSITEKAIELYVGEKGALFWLNKFAYASIFIVIGAWILFRFVGPALNLYQLDS 166

Query: 335 PLLPPTEVLSGS 300
L P+ + GS
Sbjct: 167 APLSPSSLFKGS 178


>tr|Q8LDU3|Q8LDU3_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 158

Score = 109 bits (272), Expect = 9e-23
Identities = 48/69 (69%), Positives = 56/69 (81%)
Frame = -1

Query: 509 KDWESMTLAEKAWEIYVGEKGALFWLNKIAYAAILVIVGGWIAFRFVGPALNLYQLDSPL 330
K WE MTL EKA E+YVGEKG LFWLNK+AYA+I +++GGWI FRFVGPA NLYQLD+P
Sbjct: 90 KPWEEMTLNEKALELYVGEKGLLFWLNKLAYASIYIVIGGWILFRFVGPAFNLYQLDTPP 149

Query: 329 LPPTEVLSG 303
L P +L G
Sbjct: 150 LDPKNILKG 158


>tr|Q8S8K0|Q8S8K0_ARATH Expressed protein (Putative uncharacterized
protein At2g17972) (Putative uncharacterized protein
At2g17972/T27K22.22) OS=Arabidopsis thaliana
GN=At2g17972/T27K22.22 PE=2 SV=1
Length = 158

Score = 108 bits (271), Expect = 1e-22
Identities = 48/69 (69%), Positives = 56/69 (81%)
Frame = -1

Query: 509 KDWESMTLAEKAWEIYVGEKGALFWLNKIAYAAILVIVGGWIAFRFVGPALNLYQLDSPL 330
K WE MTL EKA E+YVGEKG LFWLNK+AYA+I +++GGWI FRFVGPA NLYQLD+P
Sbjct: 90 KPWEEMTLNEKALELYVGEKGLLFWLNKLAYASIYIVIGGWIFFRFVGPAFNLYQLDTPP 149

Query: 329 LPPTEVLSG 303
L P +L G
Sbjct: 150 LDPKNILKG 158


>tr|Q5Z9P9|Q5Z9P9_ORYSJ Os06g0715200 protein OS=Oryza sativa subsp.
japonica GN=P0481E08.12 PE=2 SV=1
Length = 193

Score = 108 bits (270), Expect = 2e-22
Identities = 47/70 (67%), Positives = 59/70 (84%)
Frame = -1

Query: 509 KDWESMTLAEKAWEIYVGEKGALFWLNKIAYAAILVIVGGWIAFRFVGPALNLYQLDSPL 330
K+WE M++AEKA E+YVGEKG LFWLNK AYA+I ++VG WI FRFVGP++ LYQLD+P
Sbjct: 123 KEWEEMSMAEKAGELYVGEKGLLFWLNKFAYASIFIMVGAWILFRFVGPSIGLYQLDAPP 182

Query: 329 LPPTEVLSGS 300
L PT+V +GS
Sbjct: 183 LAPTDVFAGS 192


>tr|B6TLH7|B6TLH7_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 183

Score = 108 bits (270), Expect = 2e-22
Identities = 48/71 (67%), Positives = 57/71 (80%)
Frame = -1

Query: 509 KDWESMTLAEKAWEIYVGEKGALFWLNKIAYAAILVIVGGWIAFRFVGPALNLYQLDSPL 330
K WE M+L EKA ++YVGEKG LFWLNK AYA+I ++VG W+ FRFVGP+L LYQLD+P
Sbjct: 112 KGWEEMSLGEKAVDLYVGEKGLLFWLNKFAYASIFIMVGAWVLFRFVGPSLGLYQLDAPP 171

Query: 329 LPPTEVLSGSS 297
LPPT V SG S
Sbjct: 172 LPPTAVFSGGS 182


>tr|A2YGZ6|A2YGZ6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_24461 PE=4 SV=1
Length = 193

Score = 108 bits (270), Expect = 2e-22
Identities = 47/70 (67%), Positives = 59/70 (84%)
Frame = -1

Query: 509 KDWESMTLAEKAWEIYVGEKGALFWLNKIAYAAILVIVGGWIAFRFVGPALNLYQLDSPL 330
K+WE M++AEKA E+YVGEKG LFWLNK AYA+I ++VG WI FRFVGP++ LYQLD+P
Sbjct: 123 KEWEEMSMAEKAGELYVGEKGLLFWLNKFAYASIFIMVGAWILFRFVGPSIGLYQLDAPP 182

Query: 329 LPPTEVLSGS 300
L PT+V +GS
Sbjct: 183 LAPTDVFAGS 192


>tr|A9NKY5|A9NKY5_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 175

Score = 104 bits (260), Expect = 2e-21
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = -1

Query: 509 KDWESMTLAEKAWEIYVGEKGALFWLNKIAYAAILVIVGGWIAFRFVGPALNLYQLDSPL 330
KDWESMTL EKA E+Y+GEKG LFWLNK AYA+I +++G W+ FRFVGP L LYQL+S L
Sbjct: 106 KDWESMTLQEKAVEVYMGEKGILFWLNKSAYASIFILIGAWVLFRFVGPLLGLYQLESNL 165

Query: 329 LPPTEVLSG 303
L PT+ G
Sbjct: 166 LEPTKAFGG 174


>tr|B6T6P1|B6T6P1_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 183

Score = 103 bits (258), Expect = 4e-21
Identities = 47/71 (66%), Positives = 56/71 (78%)
Frame = -1

Query: 509 KDWESMTLAEKAWEIYVGEKGALFWLNKIAYAAILVIVGGWIAFRFVGPALNLYQLDSPL 330
K WE M+L EKA ++YVGEKG LF LNK AYA+I ++VG W+ FRFVGP+L LYQLD+P
Sbjct: 112 KGWEEMSLGEKAVDLYVGEKGLLFXLNKFAYASIFIMVGAWVLFRFVGPSLGLYQLDAPP 171

Query: 329 LPPTEVLSGSS 297
LPPT V SG S
Sbjct: 172 LPPTAVFSGGS 182