BP915777
Clone id YMU001_000076_F12
Library
Length 467
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000076_F12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCCGTCAGGTCCACTGTTTTGGCCCCTGCCTCAGCTTTCCTGGGCTGTCTGATAAGTTGG
CCACCTCAGGCAAGGTTTTTCTTATATCCTCCAGCTCTACAGTCAGCTTCTGGATTCTAT
CACAAATTTTCACATGAATTTATTCTCTCTCTTGGTCAGACTTATTGTCAGAGCTTGAAG
AACTGGTATCTTCACACTGCCATGCTTCTTTTGCAGTGCTTCCACTCTTTCCATCCACTC
CCATTTCATCAGCTAGTCCATGCACCACAGCCAGCATGGTCTCGGTCATGGCCGGTACTG
ACTGATCTTTATCAGTCGGTTGGGCTAGTATCCTCTGAATGACTCTAGCTTCGGAACTTT
TTGGCTGCTCTGGCAGCTTCTTAGCAAAATCCTCCGTGATTTTAGATGCCAGTTCCCTCT
ACTCTTGCCACTCATCTACCACCTTTTCTTTACCTTTTTCCTTCCAA
■■Homology search results ■■ -
sp_hit_id P80077
Definition sp|P80077|GLME_CLOCO Methylaspartate mutase E chain OS=Clostridium cochlearium
Align length 75
Score (bit) 31.6
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915777|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_F12.
(467 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P80077|GLME_CLOCO Methylaspartate mutase E chain OS=Clostridi... 32 1.8
sp|A2BKX7|VATE_HYPBU V-type ATP synthase subunit E OS=Hypertherm... 31 2.3
sp|P40010|NUG1_YEAST Nuclear GTP-binding protein NUG1 OS=Sacchar... 30 5.2
sp|Q13206|DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10 ... 30 5.2
sp|O26684|CCA_METTH CCA-adding enzyme OS=Methanobacterium thermo... 30 5.2
sp|O02667|AA3R_RABIT Adenosine A3 receptor OS=Oryctolagus cunicu... 30 5.2
sp|Q8EV76|TIG_MYCPE Trigger factor OS=Mycoplasma penetrans GN=ti... 30 6.8
sp|Q17Z48|RRF_HELAH Ribosome-recycling factor OS=Helicobacter ac... 30 6.8
sp|O67124|RAD50_AQUAE Probable DNA double-strand break repair ra... 30 6.8
sp|Q6Z690|LDL1_ORYSJ Lysine-specific histone demethylase 1 homol... 30 6.8
sp|P30120|TIMP1_RAT Metalloproteinase inhibitor 1 OS=Rattus norv... 29 8.9
sp|P56398|RRF_HELPY Ribosome-recycling factor OS=Helicobacter py... 29 8.9
sp|Q9ZJX1|RRF_HELPJ Ribosome-recycling factor OS=Helicobacter py... 29 8.9
sp|Q1CS05|RRF_HELPH Ribosome-recycling factor OS=Helicobacter py... 29 8.9
sp|Q95V77|LEA1_APHAV Late embryogenesis abundant protein 1 OS=Ap... 29 8.9

>sp|P80077|GLME_CLOCO Methylaspartate mutase E chain OS=Clostridium
cochlearium GN=glmE PE=1 SV=2
Length = 483

Score = 31.6 bits (70), Expect = 1.8
Identities = 17/75 (22%), Positives = 38/75 (50%)
Frame = -2

Query: 457 KGKEKVVDEWQE*RELASKITEDFAKKLPEQPKSSEARVIQRILAQPTDKDQSVPAMTET 278
K +E+V+ +W +E+ + D+ KK+P + +E V+ + + ++ A+ +
Sbjct: 15 KQREEVLQQWPTGKEVDLQEAVDYLKKIPAEKNFAEKLVLAKKKGITMAQPRAGVALLDE 74

Query: 277 MLAVVHGLADEMGVD 233
+ ++ L DE G D
Sbjct: 75 HIELLRYLQDEGGAD 89


>sp|A2BKX7|VATE_HYPBU V-type ATP synthase subunit E OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=atpE PE=3 SV=1
Length = 207

Score = 31.2 bits (69), Expect = 2.3
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -2

Query: 394 EDFAKKLPEQPKSSEARVIQRILAQPTDKDQSVPAMTETMLAVVHGLADEMG--VDGKSG 221
++F K+L + + +R +R++ P DQ++ A +A G+ E+G V+G G
Sbjct: 111 KEFIKRLLDSALETASRRSRRVIVHPARPDQAIVAELAPRVAAEKGIEVEVGEAVEGAGG 170

Query: 220 STAK 209
T +
Sbjct: 171 FTVR 174


>sp|P40010|NUG1_YEAST Nuclear GTP-binding protein NUG1
OS=Saccharomyces cerevisiae GN=NUG1 PE=1 SV=1
Length = 520

Score = 30.0 bits (66), Expect = 5.2
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = -2

Query: 406 SKITEDFAKKLPEQPKSSEARVIQRILAQPTDKDQSVPAMTETMLAVVHGLADEMGVDGK 227
+KI E+ K + + E QR+ A+ K+Q V AM E M+ DE G+
Sbjct: 58 AKILEEIEAKKMKDLEERELAKQQRLEARKAAKEQGVDAMDEDMIE-----DDENGLAAL 112

Query: 226 SGSTAKEAWQCEDTXXXXSDNKSDQ 152
S + A + E T +D + D+
Sbjct: 113 VESAQQAAAEYEGTPSNDADVRDDE 137


>sp|Q13206|DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10
OS=Homo sapiens GN=DDX10 PE=1 SV=2
Length = 875

Score = 30.0 bits (66), Expect = 5.2
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -2

Query: 460 EKGKEKVVDEWQE*RELASKITEDFAKKLPEQPKSSEARVIQRILAQPTDKDQ 302
+ G E+ +E + E+ K+ + + P P +SEA+ I+ + Q D+D+
Sbjct: 576 DTGNEEQEEEEDDEEEMEEKLAKAKGSQAPSLPNTSEAQKIKEVPTQFLDRDE 628


>sp|O26684|CCA_METTH CCA-adding enzyme OS=Methanobacterium
thermoautotrophicum GN=cca PE=3 SV=1
Length = 454

Score = 30.0 bits (66), Expect = 5.2
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Frame = -2

Query: 313 DKDQSVPAMTETMLAVVHGLADEMGVDGKS---GSTAKEAW 200
D+ + V ++++++ ++GLA+E G+D ++ GS AK W
Sbjct: 17 DEYRRVMELSDSLVECLNGLAEEQGIDAEAVLVGSVAKGTW 57


>sp|O02667|AA3R_RABIT Adenosine A3 receptor OS=Oryctolagus cuniculus
GN=ADORA3 PE=2 SV=1
Length = 319

Score = 30.0 bits (66), Expect = 5.2
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2

Query: 398 DFRCQFPLLLPLIYHLFFTFF 460
DF+C+F ++P+ Y +FF+FF
Sbjct: 164 DFQCKFDSVIPMEYMVFFSFF 184


>sp|Q8EV76|TIG_MYCPE Trigger factor OS=Mycoplasma penetrans GN=tig
PE=3 SV=1
Length = 445

Score = 29.6 bits (65), Expect = 6.8
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = -2

Query: 238 VDGKSGSTAKEAWQCEDTXXXXSDNKSDQERE*IHVKIC----DRIQKLTVELEDIRKTL 71
+DG G+ KE + + +Q RE + VK +++K++V EDI K +
Sbjct: 349 IDGGRGALTKEK---------LIEEEKNQAREYLKVKFALKQYSKVEKISVSNEDIEKEI 399

Query: 70 PEVANLSDSPGK 35
E+A S++ K
Sbjct: 400 KEIAANSNTKEK 411


>sp|Q17Z48|RRF_HELAH Ribosome-recycling factor OS=Helicobacter
acinonychis (strain Sheeba) GN=frr PE=3 SV=1
Length = 185

Score = 29.6 bits (65), Expect = 6.8
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -2

Query: 460 EKGKEKVVDEWQE*RELASKITEDFAKKLPEQPKSSEARVIQ 335
EK KE DE ++ +E KIT++ KK+ E K+ E +++
Sbjct: 143 EKDKEISEDESKKAQEQVQKITDEAIKKIDESVKNKEDAILK 184


>sp|O67124|RAD50_AQUAE Probable DNA double-strand break repair rad50
ATPase OS=Aquifex aeolicus GN=rad50 PE=3 SV=1
Length = 978

Score = 29.6 bits (65), Expect = 6.8
Identities = 33/146 (22%), Positives = 64/146 (43%)
Frame = -2

Query: 463 KEKGKEKVVDEWQE*RELASKITEDFAKKLPEQPKSSEARVIQRILAQPTDKDQSVPAMT 284
KE E + +++E +++ K+ + K+L + K E ++A + P
Sbjct: 432 KEGQLENLTQKYKEKKKVHEKVLNEL-KELERELKERELHYHAHMVASYLSPGDTCPVCG 490

Query: 283 ETMLAVVHGLADEMGVDGKSGSTAKEAWQCEDTXXXXSDNKSDQERE*IHVKICDRIQKL 104
+ G A E VD + S K A + ++ D + I+ + + ++KL
Sbjct: 491 ----GIYRGKALE-NVDAEGISELKHAKELKEKEEREIDTTLKLYAQKIN-SLKEEMEKL 544

Query: 103 TVELEDIRKTLPEVANLSDSPGKLRQ 26
E+E++RK +PE NL + KL +
Sbjct: 545 RNEVEELRKEIPE--NLKERIKKLEE 568


>sp|Q6Z690|LDL1_ORYSJ Lysine-specific histone demethylase 1 homolog
1 OS=Oryza sativa subsp. japonica GN=Os02g0755200 PE=2
SV=1
Length = 849

Score = 29.6 bits (65), Expect = 6.8
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2

Query: 373 PEQPKSSEARVIQRILAQPTDKDQSVPAMTETMLAVVHGLADEMG-VDGKSGSTAKEAWQ 197
P QP++ A + P D+D+ A E M G A G ++G++G A +A
Sbjct: 10 PLQPEAVSAEASEPPPPVPMDQDEGQAAAAEAMEGEAEGAAAAAGTIEGEAGYAAADADP 69

Query: 196 CED 188
ED
Sbjct: 70 MED 72


tr_hit_id Q1E893
Definition tr|Q1E893|Q1E893_COCIM Putative uncharacterized protein OS=Coccidioides immitis
Align length 77
Score (bit) 37.4
E-value 0.38
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915777|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_F12.
(467 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1E893|Q1E893_COCIM Putative uncharacterized protein OS=Cocci... 37 0.38
tr|Q21000|Q21000_CAEEL Putative uncharacterized protein OS=Caeno... 34 3.2
tr|Q9SN49|Q9SN49_ARATH Putative uncharacterized protein F28A21.5... 33 5.5
tr|Q9M0L9|Q9M0L9_ARATH Putative uncharacterized protein AT4g1864... 33 5.5
tr|Q4D070|Q4D070_TRYCR Trans-sialidase, putative OS=Trypanosoma ... 33 5.5
tr|B6KH14|B6KH14_TOXGO Putative uncharacterized protein OS=Toxop... 33 5.5
tr|B4Q242|B4Q242_DROYA GE17063 OS=Drosophila yakuba GN=GE17063 P... 33 5.5
tr|B4LBY4|B4LBY4_DROVI GJ13446 OS=Drosophila virilis GN=GJ13446 ... 33 5.5
tr|A1CA45|A1CA45_ASPCL Zinc finger protein gcs1 OS=Aspergillus c... 33 5.5
tr|Q17Q32|Q17Q32_AEDAE Enolase-phosphatase e-1 OS=Aedes aegypti ... 33 7.2
tr|O96062|O96062_DUGJA Myosin heavy chain OS=Dugesia japonica GN... 33 7.2
tr|A9VKJ9|A9VKJ9_BACWK Cell divisionFtsK/SpoIIIE OS=Bacillus wei... 33 9.4
tr|O96063|O96063_DUGJA Myosin heavy chain (Fragment) OS=Dugesia ... 33 9.4
tr|A8XD73|A8XD73_CAEBR CBR-MYO-5 protein OS=Caenorhabditis brigg... 33 9.4
tr|A8X7B8|A8X7B8_CAEBR CBR-FRM-1 protein OS=Caenorhabditis brigg... 33 9.4

>tr|Q1E893|Q1E893_COCIM Putative uncharacterized protein
OS=Coccidioides immitis GN=CIMG_01220 PE=4 SV=1
Length = 713

Score = 37.4 bits (85), Expect = 0.38
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = -2

Query: 466 WKEKGKEKVVDEWQE*RE--------LASKITEDFAKKLPEQPKSSEARVIQRILAQPTD 311
W+E+ +++ ++ + RE +A+K+ + A+KL E+ + E R Q+ILAQ D
Sbjct: 466 WEEERAKRIKEKIDKERESRIRGKKKVAAKVNKKLAEKLLEKEERHERRQAQKILAQGGD 525

Query: 310 KDQSVPAMTETMLAVVH 260
+ + P T ++H
Sbjct: 526 ESSAKPEAASTGKGILH 542


>tr|Q21000|Q21000_CAEEL Putative uncharacterized protein
OS=Caenorhabditis elegans GN=myo-5 PE=2 SV=1
Length = 1974

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/80 (23%), Positives = 43/80 (53%)
Frame = -2

Query: 463 KEKGKEKVVDEWQE*RELASKITEDFAKKLPEQPKSSEARVIQRILAQPTDKDQSVPAMT 284
K+KG +KV+DEW+ R+ + + E + + ++E ++ L + ++ ++V
Sbjct: 1455 KQKGFDKVLDEWR--RKCEALVAEVEQSQRETRAAATETFRLRNQLEESGEQTEAVKREN 1512

Query: 283 ETMLAVVHGLADEMGVDGKS 224
+ + + +AD++G GKS
Sbjct: 1513 KALAQELKDIADQLGEGGKS 1532


>tr|Q9SN49|Q9SN49_ARATH Putative uncharacterized protein F28A21.50
(Fragment) OS=Arabidopsis thaliana GN=F28A21.50 PE=4
SV=1
Length = 662

Score = 33.5 bits (75), Expect = 5.5
Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 17/147 (11%)
Frame = -2

Query: 400 ITEDFAKKLPEQPKSSEAR----------VIQRILAQPTDKDQSVPAMTETMLAVVHGLA 251
+T+D+A K+ E P + EAR + Q L P + + +V + ML ++ G
Sbjct: 506 LTDDYAAKVSEIPFNLEARLNPKKHVSGDLEQTSLLLPPEPEANVHSFGVLMLEIISGKL 565

Query: 250 DEMGVDGKSGSTAKEAWQCEDTXXXXSDNKSDQERE*IHVKICDRI-------QKLTVEL 92
G A + + +D + + E + V ICD I Q+ +
Sbjct: 566 SFSDEYGSIEQWASKYLEKDDLGEMIDPSLKTFKEEELEV-ICDVIRECLKTEQRQRPSM 624

Query: 91 EDIRKTLPEVANLSDSPGKLRQGPKQW 11
+D+ + L +V N++ R P W
Sbjct: 625 KDVAEQLKQVINITPEKATPRSSPLWW 651


>tr|Q9M0L9|Q9M0L9_ARATH Putative uncharacterized protein AT4g18640
OS=Arabidopsis thaliana GN=At4g18640 PE=2 SV=1
Length = 685

Score = 33.5 bits (75), Expect = 5.5
Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 17/147 (11%)
Frame = -2

Query: 400 ITEDFAKKLPEQPKSSEAR----------VIQRILAQPTDKDQSVPAMTETMLAVVHGLA 251
+T+D+A K+ E P + EAR + Q L P + + +V + ML ++ G
Sbjct: 529 LTDDYAAKVSEIPFNLEARLNPKKHVSGDLEQTSLLLPPEPEANVHSFGVLMLEIISGKL 588

Query: 250 DEMGVDGKSGSTAKEAWQCEDTXXXXSDNKSDQERE*IHVKICDRI-------QKLTVEL 92
G A + + +D + + E + V ICD I Q+ +
Sbjct: 589 SFSDEYGSIEQWASKYLEKDDLGEMIDPSLKTFKEEELEV-ICDVIRECLKTEQRQRPSM 647

Query: 91 EDIRKTLPEVANLSDSPGKLRQGPKQW 11
+D+ + L +V N++ R P W
Sbjct: 648 KDVAEQLKQVINITPEKATPRSSPLWW 674


>tr|Q4D070|Q4D070_TRYCR Trans-sialidase, putative OS=Trypanosoma
cruzi GN=Tc00.1047053511873.10 PE=4 SV=1
Length = 852

Score = 33.5 bits (75), Expect = 5.5
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = -2

Query: 415 ELASKITEDFAKKLPEQPKSSEARVIQRILAQPTDKDQSVPAMTETMLAVVHGLA--DEM 242
E S+ E+ KK P K SEA V+Q L +P + ++ T A H L
Sbjct: 746 ETVSQSVEEDEKKAPPATKPSEAPVVQATLQRPRQESEAKQVTTVGKSATTHQLPANTSQ 805

Query: 241 GVDGKSGSTAKEA 203
G GK+ +++ A
Sbjct: 806 GSVGKAAASSSHA 818


>tr|B6KH14|B6KH14_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_047700 PE=4 SV=1
Length = 3837

Score = 33.5 bits (75), Expect = 5.5
Identities = 27/78 (34%), Positives = 38/78 (48%)
Frame = +3

Query: 231 PSTPISSASPCTTASMVSVMAGTD*SLSVGWASIL*MTLASELFGCSGSFLAKSSVILDA 410
P++ +SS S C+ +S +D LSV ++ +S CS S + SS L +
Sbjct: 324 PNSTLSSVSVCSLSSRPPSTLASDQLLSVPNGDASTVSTSSPSLSCSCSSFSSSSSSLSS 383

Query: 411 SSLYSCHSSTTFSLPFSF 464
SSL S SS S P SF
Sbjct: 384 SSLLS--SSPLSSTPSSF 399


>tr|B4Q242|B4Q242_DROYA GE17063 OS=Drosophila yakuba GN=GE17063 PE=4
SV=1
Length = 393

Score = 33.5 bits (75), Expect = 5.5
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = -2

Query: 463 KEKGKEKVVDEWQE*RELASKITEDFAKKLPEQPKSSEARVIQRILAQPTDKDQSVPAMT 284
+EKGKEK+ + +E ++ A + +E K PE + S ++ + +KD VP +T
Sbjct: 299 EEKGKEKLSQDKKEDKDKAPESSEPAKAKEPEASQQSPSKKAENSNGDVDEKDLPVPTVT 358

Query: 283 E 281
+
Sbjct: 359 K 359


>tr|B4LBY4|B4LBY4_DROVI GJ13446 OS=Drosophila virilis GN=GJ13446 PE=4
SV=1
Length = 9860

Score = 33.5 bits (75), Expect = 5.5
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Frame = -2

Query: 442 VVDEWQE*RELASKITEDFAKKLPEQ--------PKSSEARVIQRILAQPTDKDQSVPAM 287
V+D++ + EL + ED K++PE+ PK + R + ILA+ +K + VP M
Sbjct: 5306 VIDDFVQ--ELPLEAIEDIVKEIPEKKRVKTKKPPKDYKFRETEEILAEEFEKPKDVPEM 5363

Query: 286 -TETMLAV-------VHGLADEMGVDGKSGSTAKE 206
ET L V G+++ + D K AK+
Sbjct: 5364 PDETKLEVPVEPTDFTIGVSENVTTDDKKPKKAKK 5398


>tr|A1CA45|A1CA45_ASPCL Zinc finger protein gcs1 OS=Aspergillus
clavatus GN=ACLA_010390 PE=4 SV=1
Length = 413

Score = 33.5 bits (75), Expect = 5.5
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = -2

Query: 463 KEKGKEKVVDEWQE*RELASKIT-EDFAKKLPEQPKSSEARVIQRILAQPTDKDQSVPAM 287
KE+ + +V +EW+E LA+K D+ +P QPK A AQP +S +
Sbjct: 111 KERYEGEVGEEWKE--RLAAKAEGRDY---VPGQPKPKPA-------AQPAAASRSNTPL 158

Query: 286 TETMLAVVHGL---ADEMGVDGKSGSTAKE 206
T T L HG A G++G + +T KE
Sbjct: 159 TNTGLRPGHGAGSPASHDGIEGTAAATKKE 188


>tr|Q17Q32|Q17Q32_AEDAE Enolase-phosphatase e-1 OS=Aedes aegypti
GN=AAEL000109 PE=4 SV=1
Length = 1107

Score = 33.1 bits (74), Expect = 7.2
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = -2

Query: 415 ELASKITEDFAKKLPEQPKSSEARVIQRILAQPTD--KDQSVPAMTETMLAVVHGLADEM 242
E +K TE+ AKK E K +E V + PT+ K + P + E +V +A E
Sbjct: 724 EEEAKKTEEDAKKTEEDAKKTEKEVKKTDEEMPTEEIKMKDEPTVPEKSKSVDEPMATEE 783

Query: 241 GVDGKSGSTAKEAWQCEDTXXXXSDNKSDQERE*IHVKICDRIQKLTVELEDIRKTLPEV 62
V K + A+E + D K + + K ++ + +D + T EV
Sbjct: 784 SVATKEETLAEETSATTEAQATKEDEKPVDTKTNENDKTTPEVKATEEKTDDAKST--EV 841

Query: 61 ANLSDSPGKLRQ 26
A ++ ++++
Sbjct: 842 ATATEEDKEMKE 853