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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915794
Clone id YMU001_000076_H05
Library
Length 476
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000076_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAAGCAAAGAAAGATATACAACTCCTCACTCTTGCGAGAGTGGATACAAAAACACAAAAC
TGTGTCCAAACTGACAAAACCTGTCAAAGTGAGAGTAAACACTCGATCACAAACTATGGC
GAGAATCTGGGAAAAATCCGACAGAATTTCCCCTGAAAACTGAGCAAAAAACTCAAGTAC
AATCTCTACCATAAACCATAACACTACTCAATGCCAATGAGTAGAAATGCTAAAATGGCT
CCACATTTCCACATACAATGGCAATCCGCACTCAACGTACATCAACGGAGTGACTGCGCA
TAAGCAAACGCCCAAAGATTTGCAATCCGGAAACTTGATCAATGCGAAAACAATGCTCTC
AAGAGAGCTTACCGGCAGTTGAAAGTGCTCGCCAAAATGCATATATAATGGGCATCAACC
ATGTGCCATAACCACATGCAAACCGTCCGNAAAGACCATGAATCCAAGCACAAAAC
■■Homology search results ■■ -
sp_hit_id Q9JZ25
Definition sp|Q9JZ25|Y1327_NEIMB Uncharacterized protein NMB1327 OS=Neisseria meningitidis serogroup B
Align length 43
Score (bit) 32.7
E-value 0.85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915794|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_H05.
         (476 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9JZ25|Y1327_NEIMB Uncharacterized protein NMB1327 OS=Neisser...    33   0.85 
sp|O70513|LG3BP_RAT Galectin-3-binding protein OS=Rattus norvegi...    32   1.9  
sp|Q07797|LG3BP_MOUSE Galectin-3-binding protein OS=Mus musculus...    31   3.2  
sp|Q86Y26|NUT_HUMAN Protein NUT OS=Homo sapiens GN=NUT PE=1 SV=1       30   5.5  
sp|Q7VB41|COBQ_PROMA Cobyric acid synthase OS=Prochlorococcus ma...    30   5.5  

>sp|Q9JZ25|Y1327_NEIMB Uncharacterized protein NMB1327 OS=Neisseria
           meningitidis serogroup B GN=NMB1327 PE=1 SV=1
          Length = 467

 Score = 32.7 bits (73), Expect = 0.85
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 224 EMLKWLHISTYNGNPHSTYINGVTAHKQTPKDLQSGNLINAKT 352
           E L+W   S  N NPH  Y+        TP D ++ +L+  K+
Sbjct: 125 EALEWAKTSAKNNNPHGQYLLAQYCRYGTPPDFETAHLLYRKS 167


>sp|O70513|LG3BP_RAT Galectin-3-binding protein OS=Rattus norvegicus
           GN=Lgals3bp PE=1 SV=2
          Length = 574

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 446 TVCMWLWHMVDAHYICILASTFNCR*ALLRALF 348
           TVC  LW+++DAH +C      N   AL RA F
Sbjct: 47  TVCDNLWNLLDAHVVCRALGYENATQALSRAAF 79


>sp|Q07797|LG3BP_MOUSE Galectin-3-binding protein OS=Mus musculus
           GN=Lgals3bp PE=1 SV=1
          Length = 577

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 446 TVCMWLWHMVDAHYICILASTFNCR*ALLRALF 348
           TVC  LW+++DAH +C      N   AL RA F
Sbjct: 47  TVCDNLWNLLDAHVVCRALGYENATQALGRAAF 79


>sp|Q86Y26|NUT_HUMAN Protein NUT OS=Homo sapiens GN=NUT PE=1 SV=1
          Length = 1132

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = -3

Query: 303 LCAVTPLMYVECGLPLYVEMWSHFSISTHWH*VVLWFMVEIVLEFFAQ 160
           L  + P M +E GLPL V+ W H   ++++  ++ + M E  +EF A+
Sbjct: 248 LARLKPTMTLEEGLPLAVQEWEH---TSNFDRMIFYEMAERFMEFEAE 292


>sp|Q7VB41|COBQ_PROMA Cobyric acid synthase OS=Prochlorococcus
           marinus GN=cobQ PE=3 SV=1
          Length = 507

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +2

Query: 230 LKWLHISTYNGNPHSTYINGVTAHKQTPKDLQS 328
           L W+    Y GNP++  I G    KQT KDLQS
Sbjct: 287 LNWIQPGDYLGNPNAVIIPG---SKQTLKDLQS 316
tr_hit_id A0RDN4
Definition tr|A0RDN4|A0RDN4_BACAH Phosphatase, PAP2 family OS=Bacillus thuringiensis (strain Al Hakam)
Align length 70
Score (bit) 34.7
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915794|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_H05.
         (476 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A0RDN4|A0RDN4_BACAH Phosphatase, PAP2 family OS=Bacillus thur...    35   2.4  
tr|A1ISD1|A1ISD1_NEIMA Putative uncharacterized protein OS=Neiss...    34   4.2  
tr|B1HU43|B1HU43_LYSSC Spore germination protein GerHB OS=Lysini...    33   7.1  
tr|A9LZQ7|A9LZQ7_NEIM0 Putative uncharacterized protein OS=Neiss...    33   7.1  
tr|A3I8R6|A3I8R6_9BACI Spore germination protein OS=Bacillus sp....    33   7.1  

>tr|A0RDN4|A0RDN4_BACAH Phosphatase, PAP2 family OS=Bacillus
           thuringiensis (strain Al Hakam) GN=BALH_2015 PE=4 SV=1
          Length = 297

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
 Frame = -3

Query: 204 VLWFMVEI---VLEFFAQFSGEILSDFSQILAIVCDRVFTLTLTGFVSLDTVLCFCIHSR 34
           V +FMV I   +LE+   F G +L+ F ++++ + +    L +  F      L +C+  R
Sbjct: 12  VSFFMVNIDMLLLEWMTSFEGSVLTTFFKLVSSLANETLYLVIISF------LYWCVSKR 65

Query: 33  KSEELYIFLC 4
           K+  + + LC
Sbjct: 66  KAFHMIVMLC 75


>tr|A1ISD1|A1ISD1_NEIMA Putative uncharacterized protein
           OS=Neisseria meningitidis serogroup A GN=NMA1541 PE=4
           SV=1
          Length = 477

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 224 EMLKWLHISTYNGNPHSTYINGVTAHKQTPKDLQSGNLINAK 349
           E LKW   S  N NPH  Y+        TP D ++ +L+  K
Sbjct: 135 EALKWAKTSAKNNNPHGQYLLAQYCRYGTPPDFETAHLLYRK 176


>tr|B1HU43|B1HU43_LYSSC Spore germination protein GerHB
           OS=Lysinibacillus sphaericus (strain C3-41) GN=gerHB
           PE=4 SV=1
          Length = 352

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
 Frame = -2

Query: 439 ACGYGTWLMPIIY------AFWRALSTAGKLS*EHCFRIDQVSGLQIFGRLLMRS 293
           A GY  W MP+++        W  +    K   EH FRI+++    +FG++L +S
Sbjct: 29  AMGYTEWFMPVLFGIIATLTLWPMIWLCSKYPNEHLFRINEI----LFGKVLGKS 79


>tr|A9LZQ7|A9LZQ7_NEIM0 Putative uncharacterized protein
           OS=Neisseria meningitidis serogroup C (strain 053442)
           GN=NMCC_1242 PE=4 SV=1
          Length = 477

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +2

Query: 224 EMLKWLHISTYNGNPHSTYINGVTAHKQTPKDLQSGNLI 340
           E LKW   S  N NPH  Y+        TP D ++ +L+
Sbjct: 135 EALKWAKTSAKNNNPHGQYLLAQYCRYGTPPDFETAHLL 173


>tr|A3I8R6|A3I8R6_9BACI Spore germination protein OS=Bacillus sp.
           B14905 GN=BB14905_01235 PE=4 SV=1
          Length = 352

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
 Frame = -2

Query: 439 ACGYGTWLMPIIY------AFWRALSTAGKLS*EHCFRIDQVSGLQIFGRLLMRS 293
           A GY  W MP+++        W  +    K   EH FRI+++    +FG++L +S
Sbjct: 29  AMGYTEWFMPVLFGIIATLTLWPMIWLCSKYPNEHLFRINEI----LFGKVLGKS 79