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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915797
Clone id YMU001_000077_A07
Library
Length 201
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000077_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCCACTCAACCTTTGGATCCAAAAGATTCTGTTGACTCAAACGCAGCGTTTGCGATACCT
TAGTTTGGATTAAATCAACTTTTACGCTCTTCAAATGTTGATTTAGACCCATAACTTCAT
CTGTGAACTTCACATTTTCTGAAGAAAGAATGCTGAGCTGTTCCTCTAGCCTGTTCAAAT
CTCCATCTTTAACATTTGCTC
■■Homology search results ■■ -
sp_hit_id A8MQR0
Definition sp|A8MQR0|WIT2_ARATH WPP domain-interacting tail-anchored protein 2 OS=Arabidopsis thaliana
Align length 62
Score (bit) 33.5
E-value 0.34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915797|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_A07.
         (201 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8MQR0|WIT2_ARATH WPP domain-interacting tail-anchored protei...    33   0.34 
sp|O95347|SMC2_HUMAN Structural maintenance of chromosomes prote...    33   0.58 
sp|Q66DV0|THII_YERPS Thiamine biosynthesis protein thiI OS=Yersi...    31   1.7  
sp|A4TPF8|THII_YERPP Thiamine biosynthesis protein thiI OS=Yersi...    31   1.7  
sp|Q1CL83|THII_YERPN Thiamine biosynthesis protein thiI OS=Yersi...    31   1.7  
sp|Q8ZC49|THII_YERPE Thiamine biosynthesis protein thiI OS=Yersi...    31   1.7  
sp|Q1C4J3|THII_YERPA Thiamine biosynthesis protein thiI OS=Yersi...    31   1.7  
sp|A7FLE0|THII_YERP3 Thiamine biosynthesis protein thiI OS=Yersi...    31   1.7  
sp|Q5R9K7|KIF5A_PONAB Kinesin heavy chain isoform 5A OS=Pongo ab...    31   1.7  
sp|Q7Z7A1|CP110_HUMAN Centriolin OS=Homo sapiens GN=CEP110 PE=1 ...    31   2.2  
sp|P33175|KIF5A_MOUSE Kinesin heavy chain isoform 5A OS=Mus musc...    30   2.9  
sp|Q12840|KIF5A_HUMAN Kinesin heavy chain isoform 5A OS=Homo sap...    30   2.9  
sp|Q8CG48|SMC2_MOUSE Structural maintenance of chromosomes prote...    30   3.8  
sp|P19401|M12_STRPY M protein, serotype 12 (Fragment) OS=Strepto...    30   4.9  
sp|A1JNR2|THII_YERE8 Thiamine biosynthesis protein thiI OS=Yersi...    29   8.4  
sp|P29616|MYSC_CHICK Myosin heavy chain, cardiac muscle isoform ...    29   8.4  

>sp|A8MQR0|WIT2_ARATH WPP domain-interacting tail-anchored protein 2
           OS=Arabidopsis thaliana GN=WIT2 PE=1 SV=1
          Length = 627

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
 Frame = -3

Query: 199 ANVKDGDLNRLE--EQLSILSSENVKFTDEVMGLNQHLKSVKVDLIQTKVSQTLRLSQQN 26
           A +K+ D   LE  E+L+ L   + K T +V  L + ++ ++V +  +KVS      QQN
Sbjct: 371 AKIKELDAANLELTEELNFLKDADDKKTKKVNSLEKQVRELEVQVQNSKVSSEANQEQQN 430

Query: 25  LL 20
           +L
Sbjct: 431 ML 432


>sp|O95347|SMC2_HUMAN Structural maintenance of chromosomes protein
           2 OS=Homo sapiens GN=SMC2 PE=1 SV=2
          Length = 1197

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 19/59 (32%), Positives = 33/59 (55%)
 Frame = -3

Query: 193 VKDGDLNRLEEQLSILSSENVKFTDEVMGLNQHLKSVKVDLIQTKVSQTLRLSQQNLLD 17
           +K+ +L  LEE+L+ L +   K+    +     +K+ + DL+QTK+ Q+    QQ  LD
Sbjct: 690 IKENELRALEEELAGLKNTAEKYRQ--LKQQWEMKTEEADLLQTKLQQSSYHKQQEELD 746


>sp|Q66DV0|THII_YERPS Thiamine biosynthesis protein thiI OS=Yersinia
           pseudotuberculosis GN=thiI PE=3 SV=1
          Length = 483

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3

Query: 109 GLNQHLKSVKVDLIQTKVSQTLRLSQQNLL 20
           GLNQH++S KV+L + +V+  L + Q  L+
Sbjct: 132 GLNQHIESAKVNLTRPQVTVNLEVDQDKLI 161


>sp|A4TPF8|THII_YERPP Thiamine biosynthesis protein thiI OS=Yersinia
           pestis (strain Pestoides F) GN=thiI PE=3 SV=1
          Length = 483

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3

Query: 109 GLNQHLKSVKVDLIQTKVSQTLRLSQQNLL 20
           GLNQH++S KV+L + +V+  L + Q  L+
Sbjct: 132 GLNQHIESAKVNLTRPQVTVNLEVDQDKLI 161


>sp|Q1CL83|THII_YERPN Thiamine biosynthesis protein thiI OS=Yersinia
           pestis bv. Antiqua (strain Nepal516) GN=thiI PE=3 SV=1
          Length = 483

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3

Query: 109 GLNQHLKSVKVDLIQTKVSQTLRLSQQNLL 20
           GLNQH++S KV+L + +V+  L + Q  L+
Sbjct: 132 GLNQHIESAKVNLTRPQVTVNLEVDQDKLI 161


>sp|Q8ZC49|THII_YERPE Thiamine biosynthesis protein thiI OS=Yersinia
           pestis GN=thiI PE=3 SV=1
          Length = 483

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3

Query: 109 GLNQHLKSVKVDLIQTKVSQTLRLSQQNLL 20
           GLNQH++S KV+L + +V+  L + Q  L+
Sbjct: 132 GLNQHIESAKVNLTRPQVTVNLEVDQDKLI 161


>sp|Q1C4J3|THII_YERPA Thiamine biosynthesis protein thiI OS=Yersinia
           pestis bv. Antiqua (strain Antiqua) GN=thiI PE=3 SV=1
          Length = 483

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3

Query: 109 GLNQHLKSVKVDLIQTKVSQTLRLSQQNLL 20
           GLNQH++S KV+L + +V+  L + Q  L+
Sbjct: 132 GLNQHIESAKVNLTRPQVTVNLEVDQDKLI 161


>sp|A7FLE0|THII_YERP3 Thiamine biosynthesis protein thiI OS=Yersinia
           pseudotuberculosis serotype O:1b (strain IP 31758)
           GN=thiI PE=3 SV=1
          Length = 483

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3

Query: 109 GLNQHLKSVKVDLIQTKVSQTLRLSQQNLL 20
           GLNQH++S KV+L + +V+  L + Q  L+
Sbjct: 132 GLNQHIESAKVNLTRPQVTVNLEVDQDKLI 161


>sp|Q5R9K7|KIF5A_PONAB Kinesin heavy chain isoform 5A OS=Pongo
           abelii GN=KIF5A PE=2 SV=1
          Length = 1032

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 21/55 (38%), Positives = 31/55 (56%)
 Frame = -3

Query: 184 GDLNRLEEQLSILSSENVKFTDEVMGLNQHLKSVKVDLIQTKVSQTLRLSQQNLL 20
           GD  +++++LS L SEN    DEV  + Q L+ + V+  Q K  +    SQQN L
Sbjct: 461 GDNEKVQQELSHLQSENDAAKDEVKEVLQALEELAVNYDQ-KSQEVEEKSQQNQL 514


>sp|Q7Z7A1|CP110_HUMAN Centriolin OS=Homo sapiens GN=CEP110 PE=1 SV=2
          Length = 2325

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -3

Query: 181  DLNRLEEQLSILSSENVKFTDEVMGLNQHLKSVKVDLIQTKVSQTLRLSQQNLLDPKV-E 5
            D++ +++QL           +E+  +  HL   K DL+ T   Q + LS+Q  L   + E
Sbjct: 1851 DISAMQQQLQEKREAVNSLQEELANVQDHLNLAKQDLLHTTKHQDVLLSEQTRLQKDISE 1910

Query: 4    W 2
            W
Sbjct: 1911 W 1911
tr_hit_id B6AJE5
Definition tr|B6AJE5|B6AJE5_9CRYT Myosin head family protein OS=Cryptosporidium muris RN66
Align length 51
Score (bit) 36.6
E-value 0.64
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915797|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_A07.
         (201 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6AJE5|B6AJE5_9CRYT Myosin head family protein OS=Cryptospori...    37   0.64 
tr|Q5ZWU8|Q5ZWU8_LEGPH Membrane protein, Tfp pilus assembly, pil...    35   2.4  
tr|A5IFR5|A5IFR5_LEGPC Membrane protein OS=Legionella pneumophil...    35   2.4  
tr|A0CTR2|A0CTR2_PARTE Chromosome undetermined scaffold_27, whol...    34   3.2  
tr|A3DD29|A3DD29_CLOTH Transcriptional regulators, TraR/DksA fam...    33   5.4  
tr|B4BEU9|B4BEU9_CLOTM Transcriptional regulator, TraR/DksA fami...    33   5.4  
tr|A8BKY9|A8BKY9_GIALA Coiled-coil protein OS=Giardia lamblia AT...    33   5.4  
tr|Q4YA93|Q4YA93_PLABE Putative uncharacterized protein OS=Plasm...    33   7.1  
tr|Q4P670|Q4P670_USTMA Putative uncharacterized protein OS=Ustil...    33   7.1  
tr|Q5X6A9|Q5X6A9_LEGPA Putative uncharacterized protein OS=Legio...    33   9.2  
tr|Q5WXS1|Q5WXS1_LEGPL Putative uncharacterized protein OS=Legio...    33   9.2  
tr|Q4R7D7|Q4R7D7_MACFA Testis cDNA, clone: QtsA-15550, similar t...    33   9.2  
tr|Q2KQ72|Q2KQ72_HUMAN Chromosome-associated protein E OS=Homo s...    33   9.2  
tr|Q05BV1|Q05BV1_HUMAN SMC2 protein (Fragment) OS=Homo sapiens G...    33   9.2  
tr|B7ZLZ7|B7ZLZ7_HUMAN SMC2 protein OS=Homo sapiens GN=SMC2 PE=2...    33   9.2  
tr|B3KMB1|B3KMB1_HUMAN cDNA FLJ10623 fis, clone NT2RP2005520, hi...    33   9.2  
tr|B3KM27|B3KM27_HUMAN cDNA FLJ10093 fis, clone HEMBA1002363, hi...    33   9.2  
tr|A8K984|A8K984_HUMAN cDNA FLJ78259 OS=Homo sapiens PE=2 SV=1         33   9.2  

>tr|B6AJE5|B6AJE5_9CRYT Myosin head family protein OS=Cryptosporidium
            muris RN66 GN=CMU_020990 PE=4 SV=1
          Length = 1788

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = -3

Query: 184  GDLNRLEEQLSILSSENVKFTDEVMGLNQHLKSVKVDLIQTKVSQTLRLSQ 32
            G L+RLE+QLSIL++E  K  DEV+ L + L   K D  ++K  + + + Q
Sbjct: 1026 GSLSRLEDQLSILTAERNKLRDEVLLLQKELNIWK-DTAESKNQKYIEMQQ 1075


>tr|Q5ZWU8|Q5ZWU8_LEGPH Membrane protein, Tfp pilus assembly, pilus
           retraction ATPase PilT OS=Legionella pneumophila subsp.
           pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
           7513) GN=lpg0987 PE=4 SV=1
          Length = 455

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 21/60 (35%), Positives = 35/60 (58%)
 Frame = -3

Query: 196 NVKDGDLNRLEEQLSILSSENVKFTDEVMGLNQHLKSVKVDLIQTKVSQTLRLSQQNLLD 17
           N+ +G     EE LS +S+ N+  TDEV+   QHL   +  L  +K+++   ++ QN+LD
Sbjct: 303 NLVNGTWTLTEENLSKVSASNLLITDEVITTIQHLPREEQMLTVSKLAE--EIAVQNMLD 360


>tr|A5IFR5|A5IFR5_LEGPC Membrane protein OS=Legionella pneumophila
           (strain Corby) GN=LPC_2292 PE=4 SV=1
          Length = 455

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 21/60 (35%), Positives = 35/60 (58%)
 Frame = -3

Query: 196 NVKDGDLNRLEEQLSILSSENVKFTDEVMGLNQHLKSVKVDLIQTKVSQTLRLSQQNLLD 17
           N+ +G     EE LS +S+ N+  TDEV+   QHL   +  L  +K+++   ++ QN+LD
Sbjct: 303 NLVNGTWTLTEENLSKVSASNLLITDEVITTIQHLPREEQMLTVSKLAE--EIAVQNMLD 360


>tr|A0CTR2|A0CTR2_PARTE Chromosome undetermined scaffold_27, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00010413001 PE=4 SV=1
          Length = 1033

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
 Frame = -3

Query: 190 KDGDLNRLEEQLSI-------LSSENVKFTDEVMGLNQHLK-SVKVDLIQTKVSQTLRLS 35
           K  ++N L ++LS        +S +N++  DE+  LN+ LK S+KV     + SQ +++ 
Sbjct: 334 KQQEINNLNQELSYKTQEIQEISLQNLRLNDEIEKLNEQLKNSLKVSQHSKEFSQQIQII 393

Query: 34  QQNLLDPK 11
           Q  L+  K
Sbjct: 394 QDKLIQNK 401


>tr|A3DD29|A3DD29_CLOTH Transcriptional regulators, TraR/DksA family
           OS=Clostridium thermocellum (strain ATCC 27405 / DSM
           1237) GN=Cthe_0623 PE=4 SV=1
          Length = 212

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 16/54 (29%), Positives = 32/54 (59%)
 Frame = -3

Query: 178 LNRLEEQLSILSSENVKFTDEVMGLNQHLKSVKVDLIQTKVSQTLRLSQQNLLD 17
           +N +EE    +S +NV+  DE+ G + H   +   L QT+++  L++ ++ LL+
Sbjct: 24  INLMEEHG--ISKQNVESADELSGYDNHPAELGTQLFQTELNNALKVHEERLLE 75


>tr|B4BEU9|B4BEU9_CLOTM Transcriptional regulator, TraR/DksA family
           OS=Clostridium thermocellum DSM 4150 GN=CtherDRAFT_1914
           PE=4 SV=1
          Length = 212

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 16/54 (29%), Positives = 32/54 (59%)
 Frame = -3

Query: 178 LNRLEEQLSILSSENVKFTDEVMGLNQHLKSVKVDLIQTKVSQTLRLSQQNLLD 17
           +N +EE    +S +NV+  DE+ G + H   +   L QT+++  L++ ++ LL+
Sbjct: 24  INLMEEHG--ISKQNVESADELSGYDNHPAELGTQLFQTELNNALKVHEERLLE 75


>tr|A8BKY9|A8BKY9_GIALA Coiled-coil protein OS=Giardia lamblia ATCC
            50803 GN=GL50803_40831 PE=4 SV=1
          Length = 2343

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 19/61 (31%), Positives = 35/61 (57%)
 Frame = -3

Query: 190  KDGDLNRLEEQLSILSSENVKFTDEVMGLNQHLKSVKVDLIQTKVSQTLRLSQQNLLDPK 11
            KD +LN L +QLS+ S+E+ +     + L + L+           +++LRL QQN+++ +
Sbjct: 1699 KDMELNSLRDQLSVKSNEHNELALSFVALKESLQK----------AESLRLEQQNMINAE 1748

Query: 10   V 8
            V
Sbjct: 1749 V 1749


>tr|Q4YA93|Q4YA93_PLABE Putative uncharacterized protein
           OS=Plasmodium berghei GN=PB000643.00.0 PE=4 SV=1
          Length = 276

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = -3

Query: 193 VKDGDLNRLEEQLSILSSENVKFTDEVMGLNQHLKSVKVDLIQTKV 56
           +KD D  + EE L I   E +KF D++  +++H+K  K D  +T V
Sbjct: 89  IKDMDRKKREEALHIREKEKIKFLDDLENVHEHVK--KTDERKTSV 132


>tr|Q4P670|Q4P670_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM04393.1 PE=4 SV=1
          Length = 1202

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 15/51 (29%), Positives = 33/51 (64%)
 Frame = -3

Query: 196 NVKDGDLNRLEEQLSILSSENVKFTDEVMGLNQHLKSVKVDLIQTKVSQTL 44
           N  D  ++ L+EQ+S + +  ++  +++  L + L++V+ DL +T+ +QTL
Sbjct: 490 NQNDELVSTLQEQISEMEARILRRNEQIGSLQRQLRNVENDLARTRTNQTL 540


>tr|Q5X6A9|Q5X6A9_LEGPA Putative uncharacterized protein
           OS=Legionella pneumophila (strain Paris) GN=lpp1058 PE=4
           SV=1
          Length = 455

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 20/60 (33%), Positives = 34/60 (56%)
 Frame = -3

Query: 196 NVKDGDLNRLEEQLSILSSENVKFTDEVMGLNQHLKSVKVDLIQTKVSQTLRLSQQNLLD 17
           N+ +G     EE L  +S+ N+  TDEV+   QHL   +  L  +K+++   ++ QN+LD
Sbjct: 303 NLVNGTWTLTEENLRKVSASNLLITDEVITTIQHLPREEQMLTVSKLAE--EIAVQNMLD 360