BP915800
Clone id YMU001_000077_A12
Library
Length 572
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000077_A12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGAATTCGCGGCCGCAGGAATTTTTATTTGTGTTATTTTCTTTTCTAGCAATTCGGCCCC
ATGCTAATTCAGCCTCCTCCAAATGATAATTGACAAAAATTGGCTTGTAATTAAGCATCT
TCGAACAAATTAAAAGTGAAATACTAAGAGCTGCCATGAGAAAAGTTTCAGCTCAATAAA
GTAGAGGTTAAAAAGCACTCGAAACCATTTATTTGAGCTAACACCCTCACTGTCAAGAAC
CTTACCACAGATGGTCAGAACTTCTAACAACAGATATTTGCAGACTAACTCCTGCACCTT
AAGCATCTCAACATCTGTGCCTCAAAACCCAATGACATGACAAAACCAGCCGGTTGAGAT
TATGCTGAGACTGCATTTGCCAAAAAAACAATCCATGCTAGCCCAGATTGCGCTGTATGT
ACAAACTCTATACCAATTCCATATACATTTGCCAAGCCAATCCTTTACCACCTTGTTTCA
TGTCTCAGGACCTTAAGACAACAGCTGCAGATTGATCCTTCAAGGTCGAAAAAAGAATCC
CCCACTACCTTGTCACTTGCTGCAGTCTCTGC
■■Homology search results ■■ -
sp_hit_id Q6F793
Definition sp|Q6F793|KUP_ACIAD Probable potassium transport system protein kup OS=Acinetobacter sp. (strain ADP1)
Align length 39
Score (bit) 31.2
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915800|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_A12.
(547 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6F793|KUP_ACIAD Probable potassium transport system protein ... 31 3.4
sp|P38454|CCMB_MARPO Putative cytochrome c biogenesis ccmB-like ... 30 9.9

>sp|Q6F793|KUP_ACIAD Probable potassium transport system protein kup
OS=Acinetobacter sp. (strain ADP1) GN=kup PE=3 SV=1
Length = 626

Score = 31.2 bits (69), Expect = 3.4
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3

Query: 416 WNWYRVCTYSAIWASMD-CFFGKCSLSIISTGWFCHVIG 303
W W++V ++ + ++D F SL I+S GW VIG
Sbjct: 394 WPWWKVTLFAVPFLALDGIFVASTSLKILSGGWVPFVIG 432


>sp|P38454|CCMB_MARPO Putative cytochrome c biogenesis ccmB-like
mitochondrial protein OS=Marchantia polymorpha GN=CCMB
PE=3 SV=1
Length = 277

Score = 29.6 bits (65), Expect = 9.9
Identities = 23/99 (23%), Positives = 38/99 (38%)
Frame = -3

Query: 413 NWYRVCTYSAIWASMDCFFGKCSLSIISTGWFCHVIGF*GTDVEMLKVQELVCKYLLLEV 234
NW+ + S I+ M +L I S GW +Q L LL +
Sbjct: 190 NWFTIIIGSQIFTLMCGIHSCLALGITSNGW--------------NSLQNLTTLPTLLPL 235

Query: 233 LTICGKVLDSEGVSSNKWFRVLFNLYFIELKLFSWQLLV 117
+ C + +WF V+ + ++ L LF + +LV
Sbjct: 236 IVFCTSI-------ETEWFHVILLMGYLLLFLFFYPILV 267


tr_hit_id B6QSR0
Definition tr|B6QSR0|B6QSR0_PENMA C6 transcription factor (Leu3), putative OS=Penicillium marneffei ATCC 18224
Align length 72
Score (bit) 34.7
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915800|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_A12.
(547 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6QSR0|B6QSR0_PENMA C6 transcription factor (Leu3), putative ... 35 3.4
tr|Q1IDN0|Q1IDN0_PSEE4 Putative uncharacterized protein OS=Pseud... 34 5.8
tr|Q88MD0|Q88MD0_PSEPK Putative uncharacterized protein OS=Pseud... 33 9.9
tr|A5W7T8|A5W7T8_PSEP1 Membrane protein-like protein OS=Pseudomo... 33 9.9

>tr|B6QSR0|B6QSR0_PENMA C6 transcription factor (Leu3), putative
OS=Penicillium marneffei ATCC 18224 GN=PMAA_001790 PE=4
SV=1
Length = 660

Score = 34.7 bits (78), Expect = 3.4
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1

Query: 262 NSCTLSISTSVPQNPMT*QNQPVEIMLRLHLPKKQSMLAQIALYVQTLYQFHIHLPSQSF 441
+ C +SI T+ +N + +P+ ++R H + ++AQ+ TLY L Q F
Sbjct: 369 SKCCVSIFTTGVRNTSSEHERPMSALIRAHETQLHDIVAQLPSNHNTLYPTIARLLIQVF 428

Query: 442 TTLFHVSGP*DN 477
+SGP DN
Sbjct: 429 YLYKDLSGPYDN 440


>tr|Q1IDN0|Q1IDN0_PSEE4 Putative uncharacterized protein
OS=Pseudomonas entomophila (strain L48) GN=PSEEN1352
PE=4 SV=1
Length = 137

Score = 33.9 bits (76), Expect = 5.8
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = -3

Query: 374 SMDCFFGKCSLSIISTGWFCHVIGF*GTDVEMLKVQELVCKYLLLEVLTICGKVLDSEGV 195
S+ CFFG +L +++ WF + G VE++ EL+ LLL G ++ S
Sbjct: 25 SLACFFGLIALLVVNNLWFADLH---GARVEVIMAIELIPLLLLLP-----GMLMGS--A 74

Query: 194 SSNKWFRVLFNLYFIE 147
++ W + N+YFI+
Sbjct: 75 RAHAWTCFVVNIYFIK 90


>tr|Q88MD0|Q88MD0_PSEPK Putative uncharacterized protein
OS=Pseudomonas putida (strain KT2440) GN=PP1643 PE=4
SV=1
Length = 137

Score = 33.1 bits (74), Expect = 9.9
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = -3

Query: 374 SMDCFFGKCSLSIISTGWFCHVIGF*GTDVEMLKVQELVCKYLLLEVLTICGKVLDSEGV 195
S+ CFFG +L +++ WF ++ G VE++ ELV LLL +
Sbjct: 25 SLACFFGLIALLVVNNLWFANLH---GARVEVILAIELVPLLLLLPGML-------KGSA 74

Query: 194 SSNKWFRVLFNLYFIE 147
++ W + N+YFI+
Sbjct: 75 RAHAWTCFVVNIYFIK 90


>tr|A5W7T8|A5W7T8_PSEP1 Membrane protein-like protein OS=Pseudomonas
putida (strain F1 / ATCC 700007) GN=Pput_4074 PE=4 SV=1
Length = 137

Score = 33.1 bits (74), Expect = 9.9
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = -3

Query: 374 SMDCFFGKCSLSIISTGWFCHVIGF*GTDVEMLKVQELVCKYLLLEVLTICGKVLDSEGV 195
S+ CFFG +L +++ WF ++ G VE++ ELV LLL +
Sbjct: 25 SLACFFGLIALLVVNNLWFANLH---GARVEVILAIELVPLLLLLPGML-------KGSA 74

Query: 194 SSNKWFRVLFNLYFIE 147
++ W + N+YFI+
Sbjct: 75 RAHAWTCFVVNIYFIK 90