BP915801
Clone id YMU001_000077_B02
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000077_B02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACATCAAATGCGGTTCCACGCCTATAAGTGAAACAGGTGCATTTGCCTCTCGTCCTGCAT
CCTCTCCATTCTCGTTCCCTATGCAATCTTCAACTCCTTCCGAAGTATCTCAATCTCCTT
TTAATAGTCAGTCAGGCAGTGCTACAGGGCAGCTGTTTCCCTTTGGAACTTCTGGGTCAG
AGCCTGCTAGTCCTTAGTTCAGTCGAGTTCACAGTCTGCCTTCTTATACGGGTCTTCTTC
TGCAGCCTCATCCACCTCATTCATGTTCTCAGCCACGTCTTCTGCACCCTTAACTTTTCC
AGCAACCTCTCCTGCACCTTCTCCTTTCTTGTTTGGTGCTCAGGCTCGCCCATCTTCTTC
AGCAAATTCAAACTCAGTATTAGGAGGCCAGACGGCACTATCTGCCAGTGGATTCACTGG
GGGAGGAGTTCAAAATAACACTGCCACCTTCTCTTTTCAAGCGCCTCCTACAACACCGTC
ACCACCATCTTTCCCATTTGGTGGAGCAAGTGCTGGCACCTCGTCTATACCATCAATTCC
TTCATTTGGAGGACA
■■Homology search results ■■ -
sp_hit_id P49791
Definition sp|P49791|NU153_RAT Nuclear pore complex protein Nup153 OS=Rattus norvegicus
Align length 42
Score (bit) 33.1
E-value 0.93
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915801|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_B02.
(555 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P49791|NU153_RAT Nuclear pore complex protein Nup153 OS=Rattu... 33 0.93
sp|Q8S2E5|KPRS3_ORYSJ Ribose-phosphate pyrophosphokinase 3 OS=Or... 32 2.7
sp|Q5XGU5|DNJ6B_XENLA DnaJ homolog subfamily B member 6-B OS=Xen... 31 3.5
sp|P38266|YBV8_YEAST Uncharacterized protein YBR108W OS=Saccharo... 30 7.9
sp|Q86XN7|K2032_HUMAN Uncharacterized protein KIAA2032 OS=Homo s... 30 7.9

>sp|P49791|NU153_RAT Nuclear pore complex protein Nup153 OS=Rattus
norvegicus GN=Nup153 PE=1 SV=1
Length = 1468

Score = 33.1 bits (74), Expect = 0.93
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2

Query: 287 PLTFPATSPAPSPFLFGAQARPSSSANSNSVLGGQTALSASG 412
P T +T+ A PF+FG A +S+ +S G T S+SG
Sbjct: 1253 PATTSSTASAAPPFVFGTGASSNSTVSSGFTFGATTTSSSSG 1294


>sp|Q8S2E5|KPRS3_ORYSJ Ribose-phosphate pyrophosphokinase 3 OS=Oryza
sativa subsp. japonica GN=Os01g0723600 PE=2 SV=1
Length = 409

Score = 31.6 bits (70), Expect = 2.7
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2

Query: 299 PATSPAPSPFLFGAQARPSSSANSNSVLGGQTALSASGFTGGGVQNN 439
P SP+PSP A ARPS A++ L L + TG + +N
Sbjct: 24 PGPSPSPSPSPASAFARPSPRASAAGRLHASLHLGGASATGSSIVSN 70


>sp|Q5XGU5|DNJ6B_XENLA DnaJ homolog subfamily B member 6-B
OS=Xenopus laevis GN=dnajb6-B PE=2 SV=1
Length = 245

Score = 31.2 bits (69), Expect = 3.5
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = +2

Query: 296 FPATSPAPSPFLFGAQARPSSSANSNSVLGGQTALSASGFTGGGVQN 436
FPA P+ SPF G SSS S GG T+ S+S F G G+ N
Sbjct: 149 FPAFGPSFSPFDSGF----SSSFGSFGGHGGFTSFSSSSFGGSGMGN 191


>sp|P38266|YBV8_YEAST Uncharacterized protein YBR108W
OS=Saccharomyces cerevisiae GN=YBR108W PE=1 SV=2
Length = 947

Score = 30.0 bits (66), Expect = 7.9
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +3

Query: 84 QSSTPSEVSQSPFNSQSGSATGQLFPFGTSGSEPA-SP*FS---RVHSLPSY 227
Q++ PS+VS + + QS Q +GT S PA SP F + H P Y
Sbjct: 195 QNAIPSQVSLNSASQQSTGFVSQNLQYGTQSSNPAPSPSFQNGLQCHQQPQY 246


>sp|Q86XN7|K2032_HUMAN Uncharacterized protein KIAA2032 OS=Homo
sapiens GN=KIAA2032 PE=2 SV=2
Length = 944

Score = 30.0 bits (66), Expect = 7.9
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2

Query: 287 PLTFPATSPAPSPFLFGAQARPSSSANSNSVLGGQTALSASGFTGGG 427
PL AT+P+P+P L G + + S+N NS L Q LS SG G
Sbjct: 820 PLPVAATAPSPAPVLPGFAS--AFSSNFNSALVAQAGLS-SGLQAAG 863


tr_hit_id A1CTD8
Definition tr|A1CTD8|A1CTD8_ASPCL Calpain, putative OS=Aspergillus clavatus
Align length 69
Score (bit) 36.2
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915801|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_B02.
(555 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A1CTD8|A1CTD8_ASPCL Calpain, putative OS=Aspergillus clavatus... 36 1.2
tr|Q4SWF7|Q4SWF7_TETNG Chromosome undetermined SCAF13625, whole ... 36 1.6
tr|Q01G91|Q01G91_OSTTA SAC3/GANP family protein (ISS) OS=Ostreoc... 31 1.9
tr|Q8R2M9|Q8R2M9_MOUSE Nup153 protein (Fragment) OS=Mus musculus... 35 2.7
tr|Q8BRF6|Q8BRF6_MOUSE Putative uncharacterized protein (Fragmen... 35 2.7
tr|Q80WR0|Q80WR0_MOUSE Nucleoporin 153 OS=Mus musculus GN=Nup153... 35 2.7
tr|Q80UN3|Q80UN3_MOUSE Nup153 protein (Fragment) OS=Mus musculus... 35 2.7
tr|Q3V3W1|Q3V3W1_MOUSE Putative uncharacterized protein (Fragmen... 35 2.7
tr|Q640Z6|Q640Z6_XENLA NUP153 protein OS=Xenopus laevis GN=NUP15... 34 6.0
tr|B8P8V5|B8P8V5_9APHY Predicted protein OS=Postia placenta Mad-... 34 6.0
tr|A6RPF8|A6RPF8_BOTFB Putative uncharacterized protein OS=Botry... 34 6.0
tr|A9V5A9|A9V5A9_MONBE Predicted protein OS=Monosiga brevicollis... 28 6.7
tr|B4QXP1|B4QXP1_DROSI GD19838 OS=Drosophila simulans GN=GD19838... 33 7.8

>tr|A1CTD8|A1CTD8_ASPCL Calpain, putative OS=Aspergillus clavatus
GN=ACLA_082660 PE=4 SV=1
Length = 827

Score = 36.2 bits (82), Expect = 1.2
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = -2

Query: 359 KKMGEPEHQTRKEKVQERLLE---KLRVQKTWLRT*MRWMRLQKKTRIRRQTVNSTELRT 189
+K E + R+ K++ R L KLR+QK W+R R M L+KK R++ +S+ +
Sbjct: 590 EKQAREEREQRRRKLERRKLREQTKLRLQKAWIRE--RKMELRKKRATERRSTSSSGSLS 647

Query: 188 SRL*PRSSK 162
+L R ++
Sbjct: 648 DKLNQRPTE 656


>tr|Q4SWF7|Q4SWF7_TETNG Chromosome undetermined SCAF13625, whole
genome shotgun sequence. (Fragment) OS=Tetraodon
nigroviridis GN=GSTENG00011518001 PE=4 SV=1
Length = 550

Score = 35.8 bits (81), Expect = 1.6
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3

Query: 90 STPSEVSQSPFNSQSGSATGQLFPFGTSGSEPASP*FSRVHSLPS-YTGLLLQPHPPHSC 266
ST S S S +S S S+ P GTSGS+P +P +R S + +L P P H
Sbjct: 473 STSSSSSSSSSSSSSSSSQPPSIPVGTSGSQPTTPILTRPIPFTSLHPSMLSSPSPFHQA 532

Query: 267 S 269
+
Sbjct: 533 A 533


>tr|Q01G91|Q01G91_OSTTA SAC3/GANP family protein (ISS)
OS=Ostreococcus tauri GN=Ot01g03420 PE=4 SV=1
Length = 1514

Score = 31.2 bits (69), Expect(2) = 1.9
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Frame = +2

Query: 296 FPATSPAPSPFLFGAQARPSS----SANSNSVLGGQTALSAS--GFTGG 424
F A++ APSP FG A P S A ++S GG T++ AS F GG
Sbjct: 193 FGASTSAPSPTAFGGTASPMSPFGAQAVASSPFGGTTSVIASTPAFGGG 241



Score = 22.7 bits (47), Expect(2) = 1.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3

Query: 84 QSSTPSEVSQSPFNSQSGSATGQLFPFGTSGSEPASP 194
QS+ PS SPF + + PFG G+ ++P
Sbjct: 168 QSTQPS----SPFGASTSQLAQSSSPFGGFGASTSAP 200


>tr|Q8R2M9|Q8R2M9_MOUSE Nup153 protein (Fragment) OS=Mus musculus
GN=Nup153 PE=1 SV=1
Length = 464

Score = 35.0 bits (79), Expect = 2.7
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2

Query: 287 PLTFPATSPAPSPFLFGAQARPSSSANSNSVLGGQTALSASG 412
P T +T+PA SPF+FG A S+S +S G T S+SG
Sbjct: 250 PATTSSTAPAASPFVFGTGA-SSNSVSSGFTFGATTTSSSSG 290


>tr|Q8BRF6|Q8BRF6_MOUSE Putative uncharacterized protein (Fragment)
OS=Mus musculus GN=Nup153 PE=2 SV=1
Length = 666

Score = 35.0 bits (79), Expect = 2.7
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2

Query: 287 PLTFPATSPAPSPFLFGAQARPSSSANSNSVLGGQTALSASG 412
P T +T+PA SPF+FG A S+S +S G T S+SG
Sbjct: 452 PATTSSTAPAASPFVFGTGA-SSNSVSSGFTFGATTTSSSSG 492


>tr|Q80WR0|Q80WR0_MOUSE Nucleoporin 153 OS=Mus musculus GN=Nup153 PE=1
SV=1
Length = 1462

Score = 35.0 bits (79), Expect = 2.7
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2

Query: 287 PLTFPATSPAPSPFLFGAQARPSSSANSNSVLGGQTALSASG 412
P T +T+PA SPF+FG A S+S +S G T S+SG
Sbjct: 1248 PATTSSTAPAASPFVFGTGA-SSNSVSSGFTFGATTTSSSSG 1288


>tr|Q80UN3|Q80UN3_MOUSE Nup153 protein (Fragment) OS=Mus musculus
GN=Nup153 PE=2 SV=1
Length = 928

Score = 35.0 bits (79), Expect = 2.7
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2

Query: 287 PLTFPATSPAPSPFLFGAQARPSSSANSNSVLGGQTALSASG 412
P T +T+PA SPF+FG A S+S +S G T S+SG
Sbjct: 714 PATTSSTAPAASPFVFGTGA-SSNSVSSGFTFGATTTSSSSG 754


>tr|Q3V3W1|Q3V3W1_MOUSE Putative uncharacterized protein (Fragment)
OS=Mus musculus GN=Nup153 PE=2 SV=1
Length = 497

Score = 35.0 bits (79), Expect = 2.7
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2

Query: 287 PLTFPATSPAPSPFLFGAQARPSSSANSNSVLGGQTALSASG 412
P T +T+PA SPF+FG A S+S +S G T S+SG
Sbjct: 283 PATTSSTAPAASPFVFGTGA-SSNSVSSGFTFGATTTSSSSG 323


>tr|Q640Z6|Q640Z6_XENLA NUP153 protein OS=Xenopus laevis GN=NUP153
PE=2 SV=1
Length = 1605

Score = 33.9 bits (76), Expect = 6.0
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2

Query: 299 PATSPAPSPFLFGAQARPSSSANSNSVLGGQTALSASGFTGG 424
P+++P+ S LFG A S+ A S S+ G LSA +GG
Sbjct: 1280 PSSTPSGSSGLFGTAAASSTPATSTSLFGSAAKLSAPASSGG 1321


>tr|B8P8V5|B8P8V5_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_102346 PE=4 SV=1
Length = 373

Score = 33.9 bits (76), Expect = 6.0
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = +2

Query: 287 PLTFPATSPAPSPFLFGAQARPSSSANSNSVL-----GGQTALSASG 412
P T PATSPA SP G PSSS+ S+++ GG + SG
Sbjct: 146 PATSPATSPAASPASNGIVPSPSSSSASDAIAPSSPGGGTSTFETSG 192