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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915802
Clone id YMU001_000077_B03
Library
Length 335
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000077_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAGAAGAGAGGACCTTGCTAAATTAGCAAGCATATGGGGAGTTCAACAAATTGATGAGCC
TAGACTCGTGGTTTGAGTTAGAGAGCCGGTACTCACCAAATAAGAGCACCTTTACAGCGC
TCCATAGAAAGTGCATCCAGGGGCACCATGCACCAAGTTTTTTTCGCAGCAGGAGTGTGC
ATACATGCTTGTGCACATGCAATAACACCAATGGTTCATGTGTGAGTATATGTGCACATA
GAAGGGCAAGCATGTGGCAGGATGCTAGCATGTTTTGCCATAGGCAGGTTCAATTAGGTA
TGCTGAGGGTATTATGCGGCGGGATCTGGCCCCAT
■■Homology search results ■■ -
sp_hit_id O49290
Definition sp|O49290|CPPM_ARATH Putative carboxyvinyl-carboxyphosphonate phosphorylmutase OS=Arabidopsis thaliana
Align length 21
Score (bit) 37.4
E-value 0.024
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915802|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_B03.
         (335 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O49290|CPPM_ARATH Putative carboxyvinyl-carboxyphosphonate ph...    37   0.024
sp|Q05957|PDP_DIACA Petal death protein OS=Dianthus caryophyllus...    33   0.34 
sp|P39985|DPO5_YEAST DNA polymerase V OS=Saccharomyces cerevisia...    32   0.99 
sp|Q5G872|SCUB2_DANRE Signal peptide, CUB and EGF-like domain-co...    31   2.2  
sp|P58294|PROK1_HUMAN Prokineticin-1 OS=Homo sapiens GN=PROK1 PE...    29   6.4  
sp|A7X3Z7|LEC2_LIOPO Lectoxin-Lio2 OS=Liophis poecilogyrus PE=2 ...    29   6.4  
sp|A7X3Z4|LEC1_LIOPO Lectoxin-Lio1 OS=Liophis poecilogyrus PE=2 ...    29   6.4  
sp|Q9NQ36|SCUB2_HUMAN Signal peptide, CUB and EGF-like domain-co...    29   8.4  
sp|Q5RE87|S38A4_PONAB Sodium-coupled neutral amino acid transpor...    29   8.4  
sp|Q969I6|S38A4_HUMAN Sodium-coupled neutral amino acid transpor...    29   8.4  
sp|Q8G2R2|HISX_BRUSU Histidinol dehydrogenase OS=Brucella suis G...    29   8.4  
sp|Q8YF59|HISX_BRUME Histidinol dehydrogenase OS=Brucella melite...    29   8.4  
sp|Q57F99|HISX_BRUAB Histidinol dehydrogenase OS=Brucella abortu...    29   8.4  
sp|Q2YPB8|HISX_BRUA2 Histidinol dehydrogenase OS=Brucella abortu...    29   8.4  

>sp|O49290|CPPM_ARATH Putative carboxyvinyl-carboxyphosphonate
           phosphorylmutase OS=Arabidopsis thaliana GN=At1g77060
           PE=2 SV=2
          Length = 339

 Score = 37.4 bits (85), Expect = 0.024
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +3

Query: 33  YGEFNKLMSLDSWFELESRYS 95
           + EFN L+ LDSWFELE+RYS
Sbjct: 308 FEEFNSLVDLDSWFELEARYS 328


>sp|Q05957|PDP_DIACA Petal death protein OS=Dianthus caryophyllus
           GN=PDP PE=1 SV=1
          Length = 318

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 11/20 (55%), Positives = 19/20 (95%)
 Frame = +3

Query: 33  YGEFNKLMSLDSWFELESRY 92
           + EFN+L+SL+SW+E+ES++
Sbjct: 291 FSEFNELISLESWYEMESKF 310


>sp|P39985|DPO5_YEAST DNA polymerase V OS=Saccharomyces cerevisiae
           GN=POL5 PE=1 SV=1
          Length = 1022

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = -2

Query: 166 RKKLGAWCPWMHFLWSAVKVLLFGEYRLSNSNHESR 59
           ++K   W P +HF+WS V + LFG  +L N++H S+
Sbjct: 278 KQKNTNWNPRLHFVWS-VLLPLFGNGKLENTSHISK 312


>sp|Q5G872|SCUB2_DANRE Signal peptide, CUB and EGF-like
           domain-containing protein 2 OS=Danio rerio GN=scube2
           PE=2 SV=1
          Length = 1010

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 153 PSFFRSRSVHTCLCTCNNTNGSCVSIC 233
           P F  +++   C+ TCN+ NG C  IC
Sbjct: 185 PGFELAKNQRGCILTCNHGNGGCQHIC 211


>sp|P58294|PROK1_HUMAN Prokineticin-1 OS=Homo sapiens GN=PROK1 PE=1
           SV=1
          Length = 105

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +3

Query: 129 KCIQGHHAPSFFRSRSVHTCLCTCN 203
           +C  G H   FFR R  HTC C  N
Sbjct: 59  ECHPGSHKVPFFRKRKHHTCPCLPN 83


>sp|A7X3Z7|LEC2_LIOPO Lectoxin-Lio2 OS=Liophis poecilogyrus PE=2
           SV=1
          Length = 163

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 186 CLCTCNNTNGSCVSICAHRRASMWQDASMFCHRQVQLGML 305
           CL   ++++G C  +   +    W DA MFC ++V+ G L
Sbjct: 25  CLPGWSSSDGYCYKV--FKEYKRWDDAEMFCRQEVEGGHL 62


>sp|A7X3Z4|LEC1_LIOPO Lectoxin-Lio1 OS=Liophis poecilogyrus PE=2
           SV=1
          Length = 163

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 186 CLCTCNNTNGSCVSICAHRRASMWQDASMFCHRQVQLGML 305
           CL   ++++G C  +   +    W DA MFC ++V+ G L
Sbjct: 25  CLPGWSSSDGYCYKV--FKEYKRWDDAEMFCRQEVEGGHL 62


>sp|Q9NQ36|SCUB2_HUMAN Signal peptide, CUB and EGF-like
           domain-containing protein 2 OS=Homo sapiens GN=SCUBE2
           PE=2 SV=1
          Length = 999

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 153 PSFFRSRSVHTCLCTCNNTNGSCVSIC 233
           P F  +++   C+ TCN+ NG C   C
Sbjct: 202 PGFELAKNQRDCILTCNHGNGGCQHSC 228


>sp|Q5RE87|S38A4_PONAB Sodium-coupled neutral amino acid transporter
           4 OS=Pongo abelii GN=SLC38A4 PE=2 SV=1
          Length = 547

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 21/50 (42%), Positives = 28/50 (56%)
 Frame = -2

Query: 250 LALLCAHILTHEPLVLLHVHKHVCTLLLRKKLGAWCPWMHFLWSAVKVLL 101
           LA+L A  LT  P+VL  +   V TLL  K+  +W    HFL +AV + L
Sbjct: 417 LAVLVAVTLT-VPIVLFPIRTSVTTLLFPKRPFSWI--RHFLIAAVLIAL 463


>sp|Q969I6|S38A4_HUMAN Sodium-coupled neutral amino acid transporter
           4 OS=Homo sapiens GN=SLC38A4 PE=1 SV=1
          Length = 547

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 21/50 (42%), Positives = 28/50 (56%)
 Frame = -2

Query: 250 LALLCAHILTHEPLVLLHVHKHVCTLLLRKKLGAWCPWMHFLWSAVKVLL 101
           LA+L A  LT  P+VL  +   V TLL  K+  +W    HFL +AV + L
Sbjct: 417 LAVLVAVTLT-VPIVLFPIRTSVITLLFPKRPFSWI--RHFLIAAVLIAL 463
tr_hit_id Q8VYA2
Definition tr|Q8VYA2|Q8VYA2_ARATH Putative carboxyphosphonoenolpyruvate mutase OS=Arabidopsis thaliana
Align length 21
Score (bit) 37.4
E-value 0.38
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915802|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_B03.
         (335 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8VYA2|Q8VYA2_ARATH Putative carboxyphosphonoenolpyruvate mut...    37   0.38 
tr|Q9LPL2|Q9LPL2_ARATH F24J8.7 protein OS=Arabidopsis thaliana G...    36   0.85 
tr|Q501F7|Q501F7_ARATH At1g21440 (Putative uncharacterized prote...    36   0.85 
tr|A2ZIS0|A2ZIS0_ORYSI Putative uncharacterized protein OS=Oryza...    35   1.4  
tr|A7N5A8|A7N5A8_VIBHB Putative uncharacterized protein OS=Vibri...    34   3.2  
tr|B2PWH7|B2PWH7_PROST Putative uncharacterized protein OS=Provi...    34   3.2  
tr|Q2QWN6|Q2QWN6_ORYSJ Carboxyvinyl-carboxyphosphonate phosphory...    34   4.2  
tr|Q0IPL3|Q0IPL3_ORYSJ Os12g0189300 protein OS=Oryza sativa subs...    34   4.2  
tr|A3CFL9|A3CFL9_ORYSJ Putative uncharacterized protein OS=Oryza...    34   4.2  
tr|B6X474|B6X474_9ENTR Putative uncharacterized protein OS=Provi...    33   7.2  
tr|B2Q5R4|B2Q5R4_PROST Putative uncharacterized protein OS=Provi...    33   7.2  
tr|B2PWU7|B2PWU7_PROST Putative uncharacterized protein OS=Provi...    33   7.2  

>tr|Q8VYA2|Q8VYA2_ARATH Putative carboxyphosphonoenolpyruvate mutase
           OS=Arabidopsis thaliana GN=At1g77060/F22K20.14 PE=2 SV=1
          Length = 337

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +3

Query: 33  YGEFNKLMSLDSWFELESRYS 95
           + EFN L+ LDSWFELE+RYS
Sbjct: 306 FEEFNSLVDLDSWFELEARYS 326


>tr|Q9LPL2|Q9LPL2_ARATH F24J8.7 protein OS=Arabidopsis thaliana
           GN=F24J8.7 PE=4 SV=1
          Length = 304

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 13/21 (61%), Positives = 20/21 (95%)
 Frame = +3

Query: 33  YGEFNKLMSLDSWFELESRYS 95
           + EFN+L++LDSW+ELE++YS
Sbjct: 274 FEEFNRLVNLDSWYELETKYS 294


>tr|Q501F7|Q501F7_ARATH At1g21440 (Putative uncharacterized protein
           At1g21440) OS=Arabidopsis thaliana GN=At1g21440 PE=2
           SV=1
          Length = 336

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 13/21 (61%), Positives = 20/21 (95%)
 Frame = +3

Query: 33  YGEFNKLMSLDSWFELESRYS 95
           + EFN+L++LDSW+ELE++YS
Sbjct: 306 FEEFNRLVNLDSWYELETKYS 326


>tr|A2ZIS0|A2ZIS0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_37721 PE=4 SV=1
          Length = 357

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +3

Query: 33  YGEFNKLMSLDSWFELESRYSPNKS 107
           + EFN L+ LDSW ++E+R+S N S
Sbjct: 292 FAEFNNLVGLDSWLDIEARFSVNSS 316


>tr|A7N5A8|A7N5A8_VIBHB Putative uncharacterized protein OS=Vibrio
           harveyi (strain ATCC BAA-1116 / BB120) GN=VIBHAR_05998
           PE=4 SV=1
          Length = 128

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
 Frame = +3

Query: 51  LMSLDSWFELESRYSPNKSTFT-ALHRKCIQGHHAPSFFRSRSVHTCLCTCNNTNGSCVS 227
           L+S   W ++ES    +K+      HRK +    A +         C     N  G C S
Sbjct: 7   LISDALWAKIESLLPIHKTNHPLGTHRKRVDNRDAMNGILFVLRTGCQWNALNATGICTS 66

Query: 228 ICAHRRASMWQDASMF 275
             AHRR   W+DA +F
Sbjct: 67  SSAHRRFQEWRDAGVF 82


>tr|B2PWH7|B2PWH7_PROST Putative uncharacterized protein
           OS=Providencia stuartii ATCC 25827 GN=PROSTU_00913 PE=4
           SV=1
          Length = 267

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 31/91 (34%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
 Frame = +3

Query: 45  NKLMSLDSWFELESRYSPNKSTFTAL--HRKCIQGHHAPS--FFRSRSVHTCLCTCNNTN 212
           NK    D  +E  +   P   T   L  HRK +    A +  FF  R+   C     N  
Sbjct: 4   NKWQISDGLWEKMAPLIPEHKTHHPLGTHRKRVDNRAAMNAIFFVLRT--GCQWNALNAT 61

Query: 213 GSCVSICAHRRASMWQDASMFCHRQVQLGML 305
           G C S  AHRR   W+DA +F  R  Q G+L
Sbjct: 62  GICSSSSAHRRFQEWRDAGVF-ERFWQNGLL 91


>tr|Q2QWN6|Q2QWN6_ORYSJ Carboxyvinyl-carboxyphosphonate
           phosphorylmutase, putative, expressed OS=Oryza sativa
           subsp. japonica GN=LOC_Os12g08760 PE=4 SV=1
          Length = 356

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +3

Query: 33  YGEFNKLMSLDSWFELESRYSPNKST 110
           + EFN L+ LDSW ++E R+S N S+
Sbjct: 292 FTEFNNLVGLDSWLDIEVRFSVNSSS 317


>tr|Q0IPL3|Q0IPL3_ORYSJ Os12g0189300 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0189300 PE=4 SV=1
          Length = 328

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +3

Query: 33  YGEFNKLMSLDSWFELESRYSPNKST 110
           + EFN L+ LDSW ++E R+S N S+
Sbjct: 264 FTEFNNLVGLDSWLDIEVRFSVNSSS 289


>tr|A3CFL9|A3CFL9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_034091 PE=4 SV=1
          Length = 356

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +3

Query: 33  YGEFNKLMSLDSWFELESRYSPNKST 110
           + EFN L+ LDSW ++E R+S N S+
Sbjct: 292 FTEFNNLVGLDSWLDIEVRFSVNSSS 317


>tr|B6X474|B6X474_9ENTR Putative uncharacterized protein
           OS=Providencia rustigianii DSM 4541 GN=PROVRUST_02016
           PE=4 SV=1
          Length = 132

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
 Frame = +3

Query: 45  NKLMSLDSWFELESRYSPNKSTFTAL--HRKCIQGHHAPS--FFRSRSVHTCLCTCNNTN 212
           NK    D  ++  +   P  ST   L  HRK +    A +  FF  R+   C     N  
Sbjct: 4   NKWQISDELWDKIAPLIPEHSTQHPLGTHRKRVDNRAAMNAIFFVLRT--GCQWNVLNAT 61

Query: 213 GSCVSICAHRRASMWQDASMFCHRQVQLGML 305
           G C S  AHRR   W+DA +F  R  Q G+L
Sbjct: 62  GICSSSSAHRRFQEWRDAGVF-ERFWQNGLL 91