BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915803|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_B04.
         (431 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q11107|LIN13_CAEEL Zinc finger protein lin-13 OS=Caenorhabdit...    30   5.5  
sp|P97839|DLGP4_RAT Disks large-associated protein 4 OS=Rattus n...    30   5.5  
sp|B1AZP2|DLGP4_MOUSE Disks large-associated protein 4 OS=Mus mu...    30   5.5  
sp|A3LSN3|DRS1_PICST ATP-dependent RNA helicase DRS1 OS=Pichia s...    29   7.1  
sp|Q9NR16|C163B_HUMAN Scavenger receptor cysteine-rich type 1 pr...    29   7.1  

>sp|Q11107|LIN13_CAEEL Zinc finger protein lin-13 OS=Caenorhabditis
           elegans GN=lin-13 PE=2 SV=2
          Length = 2248

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -1

Query: 167 LQWSSVLLEENNRDQTDESERSFG-----EDGEDVFADSLLRTSNKA 42
           L+W     ++ NR+ TD +E+ F        GE+ F  SLL   N++
Sbjct: 597 LRWKHAKTKKENRNITDSNEKEFSYEPGESSGEEDFQKSLLEQDNQS 643


>sp|P97839|DLGP4_RAT Disks large-associated protein 4 OS=Rattus
           norvegicus GN=Dlgap4 PE=2 SV=1
          Length = 992

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 206 G*VYRHIDSPGSGLQWSSVLLEENNRDQTDE 114
           G  Y ++  PG G +WS+ LL   + D T E
Sbjct: 325 GLAYHYLQVPGGGGEWSTTLLSPRDMDSTAE 355


>sp|B1AZP2|DLGP4_MOUSE Disks large-associated protein 4 OS=Mus
           musculus GN=Dlgap4 PE=1 SV=1
          Length = 992

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 206 G*VYRHIDSPGSGLQWSSVLLEENNRDQTDE 114
           G  Y ++  PG G +WS+ LL   + D T E
Sbjct: 325 GLAYHYLQVPGGGGEWSTTLLSPRDMDSTAE 355


>sp|A3LSN3|DRS1_PICST ATP-dependent RNA helicase DRS1 OS=Pichia
           stipitis GN=DRS1 PE=3 SV=3
          Length = 741

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -1

Query: 188 IDSPGSGLQWSSVLLEENNRDQTDESERSFGEDGED 81
           +D  G G +   V+ EE+  D+ DE+++S GED +D
Sbjct: 148 LDGFGMGAE-EKVIDEEDEEDEEDENDKSDGEDDKD 182


>sp|Q9NR16|C163B_HUMAN Scavenger receptor cysteine-rich type 1
           protein M160 OS=Homo sapiens GN=CD163L1 PE=1 SV=1
          Length = 1453

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 89  HPPQSCVHSRQFGLYCS 139
           HP  +C+HSR+ G+ CS
Sbjct: 879 HPEDTCIHSREVGVVCS 895

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915803|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_B04.
         (431 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q49P02|Q49P02_IXOSC Reverse transcriptase-like protein (Fragm...    37   0.38 
tr|B7PZY1|B7PZY1_IXOSC Putative uncharacterized protein OS=Ixode...    36   0.84 
tr|B6N906|B6N906_BRAFL Putative uncharacterized protein OS=Branc...    36   0.84 

>tr|Q49P02|Q49P02_IXOSC Reverse transcriptase-like protein
           (Fragment) OS=Ixodes scapularis PE=4 SV=1
          Length = 513

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 14/34 (41%), Positives = 25/34 (73%)
 Frame = -3

Query: 384 MILISHSPDGMQRHLDALHTFASNSGLSVNLGKT 283
           +I+ + +P+G+QR LD+LH+F    GL++N  K+
Sbjct: 37  LIVFASTPEGLQRRLDSLHSFVGARGLAINAEKS 70


>tr|B7PZY1|B7PZY1_IXOSC Putative uncharacterized protein OS=Ixodes
           scapularis GN=IscW_ISCW020440 PE=4 SV=1
          Length = 149

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -3

Query: 384 MILISHSPDGMQRHLDALHTFASNSGLSVNLGKT 283
           +IL   +P+G+QR LD+LH F    G ++N+ K+
Sbjct: 88  LILFESTPEGLQRRLDSLHIFVGARGQAINMEKS 121


>tr|B6N906|B6N906_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_92225 PE=4 SV=1
          Length = 154

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 15/29 (51%), Positives = 23/29 (79%)
 Frame = -3

Query: 357 GMQRHLDALHTFASNSGLSVNLGKTKVMF 271
           G+QR+LD+L T  + +GL +N GKT+VM+
Sbjct: 63  GLQRNLDSLDTAYTRAGLGINKGKTEVMY 91