BP915804
Clone id YMU001_000077_B06
Library
Length 397
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000077_B06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAGCTTTGCTTATGCACTAGTTATTTTGTTCATTTCAATGGTGTAAGTCCTCCTCTTGCA
TAGGCATTTTATTTCTCTCTCATCTCTCCTCACTTTGTGTCTACAACATGAATGCTACAT
ATGTGTATCCACCCTAAAAACCCAACAATTGGTATCAGAGTATTAAAGACCCTCATAGGC
TCACTAGCACACACTAGCATTCACGTTTTACGGTGGTTATCTCACACTCACTCTAAAACG
TTTTTGGAAGAGCTAAAGGAGGAGAAAGTCAAGCCTCACAAGTGGACAAGTGGCCTTGAA
ATGTGGAAAGTGCTCTTCACTTGATTCTTGCTCATTCAACCACCTACTTTCTCTCTCCTC
TAGGAGCTTCTCATTCTTCCCAGCCCAACAGGTACTC
■■Homology search results ■■ -
sp_hit_id Q7Z4L5
Definition sp|Q7Z4L5|TT21B_HUMAN Tetratricopeptide repeat protein 21B OS=Homo sapiens
Align length 57
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915804|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_B06.
(397 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7Z4L5|TT21B_HUMAN Tetratricopeptide repeat protein 21B OS=Ho... 31 1.7
sp|Q9BS16|CENPK_HUMAN Centromere protein K OS=Homo sapiens GN=CE... 29 6.4

>sp|Q7Z4L5|TT21B_HUMAN Tetratricopeptide repeat protein 21B OS=Homo
sapiens GN=TTC21B PE=2 SV=1
Length = 1316

Score = 31.2 bits (69), Expect = 1.7
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1

Query: 112 MLHMCIHPKNPTIGIRVLKTLIGSLAH-TSIHVLRWLSHTHSKTFLEELKEEKVKPH 279
M+ +C++P N T+G V + L G L + T L+ ++ L+ELK + V+ H
Sbjct: 1063 MIEICLNPDNETVGGEVFENLDGDLGNSTEKQESVQLAVRTAEKLLKELKPQTVQGH 1119


>sp|Q9BS16|CENPK_HUMAN Centromere protein K OS=Homo sapiens GN=CENPK
PE=1 SV=1
Length = 269

Score = 29.3 bits (64), Expect = 6.4
Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = -2

Query: 378 KNEKLLE--ERESRWLNEQESSEE 313
KNEKL E ERE RWL+EQ+ E
Sbjct: 114 KNEKLKEDLEREQRWLDEQQQIME 137


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915804|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_B06.
(397 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******