BP915813
Clone id YMU001_000077_C07
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000077_C07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGCCGCGAATAGATGATAAATGATTGCTTAGGCTCCAACAAGGAAACAATCTACAATATG
CACAATTATAACCTTTTGCAAGACCATCACAACATGGTACATGCTGAAACAACACAATTG
CACTGCAAATAGTAGTCTCTATCCCTTGCATTGTCTTCTCTCCCCTTCTTTGTTGAACAA
TTTATAAGCTTCCTCCTCATTATCATCCTGCACATAGAGCAAGCTTTCCAAGTGTGCCTT
CCTTGAATCACAACAGGCACAAGTTCTCTTTCATCAGACCATAGGTATAAGCCCAATCCT
AGGTGAGAAGATTCTAGTTCCTGAAACCATTATGCACACGCATACCCATGTGCATCGTTA
CTGAAACCACTACGCACATGGGTAACCATTATCACAGATACCTAGTGAACTTAAGAACCA
CTCTTGCCCATGACCACCCCATCTGCATAGTTCCAAACTGCTATAGCTATGTGCTTGTCC
TTGATAACTTTGACAGCAAGCAAGCCTTCAACAACTGCTGCATTCTTGTAGCCGTCTTAC
TTGCCTATCACAAAG
■■Homology search results ■■ -
sp_hit_id Q6ZRP5
Definition sp|Q6ZRP5|YD019_HUMAN Putative uncharacterized protein FLJ46204 OS=Homo sapiens
Align length 44
Score (bit) 26.6
E-value 4.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915813|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_C07.
(555 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6ZRP5|YD019_HUMAN Putative uncharacterized protein FLJ46204 ... 27 4.6
sp|P31073|DYR_CITFR Dihydrofolate reductase OS=Citrobacter freun... 31 4.6
sp|Q61817|CREB3_MOUSE Cyclic AMP-responsive element-binding prot... 31 4.7
sp|Q6FT25|CHS7_CANGA Chitin synthase export chaperone OS=Candida... 30 6.0

>sp|Q6ZRP5|YD019_HUMAN Putative uncharacterized protein FLJ46204
OS=Homo sapiens PE=2 SV=2
Length = 223

Score = 26.6 bits (57), Expect(2) = 4.6
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 8/44 (18%)
Frame = +2

Query: 272 HQTIGISPILGEKILVPETIMHT--------HTHVHRY*NHYAH 379
H G+ + G + P T MHT HTH H + + + H
Sbjct: 85 HTHTGMHTLTGTHVHTPHTQMHTRILTLSHMHTHAHTHAHTHGH 128



Score = 21.9 bits (45), Expect(2) = 4.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3

Query: 360 TETTTHMGNHYHRYLVNLRTTLAH 431
T TH +HYH + L + AH
Sbjct: 136 THAHTHAHSHYHTRTLTLTHSHAH 159


>sp|P31073|DYR_CITFR Dihydrofolate reductase OS=Citrobacter freundii
GN=folA PE=3 SV=1
Length = 159

Score = 30.8 bits (68), Expect = 4.6
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -2

Query: 281 WSDERELVPVVIQGRHTWKACSMCRMIMRRKLINCSTKKGREDNAR 144
W L V+ GRHTW+ S+ R + RK I S+K G +D +
Sbjct: 30 WFKRNTLNKPVVMGRHTWE--SIGRPLPGRKNIVISSKPGTDDRVQ 73


>sp|Q61817|CREB3_MOUSE Cyclic AMP-responsive element-binding protein
3 OS=Mus musculus GN=Creb3 PE=2 SV=2
Length = 404

Score = 30.8 bits (68), Expect = 4.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1

Query: 22 DCLGSNKETIYNMHNYNLLQDHHNMVHAETTQLHCK 129
D LGS+ +I + HNY+L Q+H ++ E + C+
Sbjct: 75 DVLGSSSSSILHDHNYSLPQEHVSIDLGECEMISCR 110


>sp|Q6FT25|CHS7_CANGA Chitin synthase export chaperone OS=Candida
glabrata GN=CHS7 PE=3 SV=1
Length = 312

Score = 30.4 bits (67), Expect = 6.0
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Frame = +3

Query: 330 LCTR--IPMCIVTETTTHMGNHYHRYLVNLRTTLAHDHP-----ICIVPNCYSYVLVLDN 488
+C+R +P+C V ++TTH LV +T HD I I+P CY+ + + N
Sbjct: 9 ICSRTPLPLCSVIKSTTH--------LVLSNSTKIHDFDPQHLNIGILPKCYARSIDIAN 60

Query: 489 ---FDSKQAFNNCCILVAVLL 542
F AF N L +L+
Sbjct: 61 TTIFGIGNAFINIAALGVILI 81


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915813|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_C07.
(555 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******