BP915838
Clone id YMU001_000077_G01
Library
Length 489
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000077_G01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATGGCAGGGCCATGGAGCGTAATGGATCCCCTGGCTGCCTCTTCCTCCTCCTCCTCAGAA
AATTCCGATGCGAAGTCTGATGTCGATGAGGACTCTGCTGCAGCTCCAAAGCAATTAGAG
GAGAAGAAGAAAGGTGCCCTAGATTTCGAGGCCATACGCAAGCGATGGATATTCAGGAGG
CCCTTCTGTTCTTTATGTGCCTCCACCGAAGCCAGACACACTGCAAGAGGGCCAGGATTG
GTCTTGGTCTTACGGGAATGGGAAGGGTGACAATGCCGAAGAAAAAGAACCCATAACTGA
GCGCGATGGGACACGGCACAATGCAAATGACGGGGCTGTTCAGGCTGCTGCCCAGGCCGT
AGCAGAGTTCAACTATGCAAAAAAACAAAAACGTGAGAAAGCTGCGGAAGCCAGTGCTCT
CTCATTTTCACAAAAAGAGAAACGAAAACGCGACTTTGGTCAGGCCAGTAGAGGAAAAAA
CTACGTCGA
■■Homology search results ■■ -
sp_hit_id Q7SZP2
Definition sp|Q7SZP2|CA052_DANRE UPF0690 protein C1orf52 homolog OS=Danio rerio
Align length 22
Score (bit) 35.4
E-value 0.14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915838|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_G01.
(489 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7SZP2|CA052_DANRE UPF0690 protein C1orf52 homolog OS=Danio r... 35 0.14
sp|P09793|CTLA4_MOUSE Cytotoxic T-lymphocyte protein 4 OS=Mus mu... 31 2.6
sp|A5EQ55|KATG_BRASB Catalase-peroxidase OS=Bradyrhizobium sp. (... 31 3.4
sp|Q9BZA4|CY15B_HUMAN Uncharacterized protein CYorf15B OS=Homo s... 31 3.4
sp|B3EKE9|KATG_CHLPB Catalase-peroxidase OS=Chlorobium phaeobact... 30 5.8
sp|Q987S0|KATG_RHILO Catalase-peroxidase OS=Rhizobium loti GN=ka... 30 7.6
sp|Q4PGL2|INO80_USTMA Putative DNA helicase INO80 OS=Ustilago ma... 30 7.6
sp|P16410|CTLA4_HUMAN Cytotoxic T-lymphocyte protein 4 OS=Homo s... 30 7.6
sp|Q9XSI1|CTLA4_CANFA Cytotoxic T-lymphocyte protein 4 OS=Canis ... 30 7.6
sp|A5DZS4|MCA1_LODEL Metacaspase-1 OS=Lodderomyces elongisporus ... 29 9.9
sp|Q9MYX7|CTLA4_PIG Cytotoxic T-lymphocyte protein 4 OS=Sus scro... 29 9.9

>sp|Q7SZP2|CA052_DANRE UPF0690 protein C1orf52 homolog OS=Danio
rerio GN=zgc:65873 PE=1 SV=1
Length = 214

Score = 35.4 bits (80), Expect = 0.14
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +2

Query: 422 SFSQKEKRKRDFGQASRGKNYV 487
+F QKEKRKRD GQA+ KN+V
Sbjct: 181 TFQQKEKRKRDIGQATSDKNFV 202


>sp|P09793|CTLA4_MOUSE Cytotoxic T-lymphocyte protein 4 OS=Mus
musculus GN=Ctla4 PE=1 SV=1
Length = 223

Score = 31.2 bits (69), Expect = 2.6
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 15/63 (23%)
Frame = -3

Query: 412 GFRSFLTFLFFCIVELCY------GLGSSLNSPVICIVPCP---------IALSYGFFFF 278
G R+ T L+ C VEL Y G+G+ VI PCP +A+S G FF+
Sbjct: 118 GLRAVDTGLYLCKVELMYPPPYFVGMGNGTQIYVIDPEPCPDSDFLLWILVAVSLGLFFY 177

Query: 277 GIV 269
+
Sbjct: 178 SFL 180


>sp|A5EQ55|KATG_BRASB Catalase-peroxidase OS=Bradyrhizobium sp.
(strain BTAi1 / ATCC BAA-1182) GN=katG PE=3 SV=1
Length = 726

Score = 30.8 bits (68), Expect = 3.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2

Query: 173 SGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNA 277
+G S++ P D Q+G W+ YG+GKG +A
Sbjct: 262 AGDASLVGAEPEGADIAQQGLGWASKYGSGKGGDA 296


>sp|Q9BZA4|CY15B_HUMAN Uncharacterized protein CYorf15B OS=Homo
sapiens GN=CYorf15B PE=2 SV=1
Length = 181

Score = 30.8 bits (68), Expect = 3.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3

Query: 363 QSSTMQKNKNVRKLRKPVLSHFHKKRNENATLVRPVEEKT 482
+ T + K ++KL K ++ + K N N TL++ EEKT
Sbjct: 37 KQETEKLTKKIKKLEKEMVIWYTKWENNNTTLLQMAEEKT 76


>sp|B3EKE9|KATG_CHLPB Catalase-peroxidase OS=Chlorobium
phaeobacteroides (strain BS1) GN=katG PE=3 SV=1
Length = 732

Score = 30.0 bits (66), Expect = 5.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2

Query: 176 GGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGD 271
G P ++ P D ++G W YG+GKGD
Sbjct: 270 GDPKLVGPEPEAADIEEQGLGWKSGYGSGKGD 301


>sp|Q987S0|KATG_RHILO Catalase-peroxidase OS=Rhizobium loti GN=katG
PE=3 SV=2
Length = 732

Score = 29.6 bits (65), Expect = 7.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2

Query: 173 SGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNA 277
+G S++ V P D Q+G W+ +G GKG +A
Sbjct: 268 AGDASLVGVEPEGADIEQQGLGWASKFGTGKGGDA 302


>sp|Q4PGL2|INO80_USTMA Putative DNA helicase INO80 OS=Ustilago maydis
GN=INO80 PE=3 SV=1
Length = 1910

Score = 29.6 bits (65), Expect = 7.6
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2

Query: 206 VEAHKEQKGLLNIHRLRMASKSRAPF 129
+E+H EQKG LN H+LR PF
Sbjct: 1198 IESHAEQKGTLNEHQLRRLHMILKPF 1223


>sp|P16410|CTLA4_HUMAN Cytotoxic T-lymphocyte protein 4 OS=Homo
sapiens GN=CTLA4 PE=1 SV=3
Length = 223

Score = 29.6 bits (65), Expect = 7.6
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 15/63 (23%)
Frame = -3

Query: 412 GFRSFLTFLFFCIVELCY------GLGSSLNSPVICIVPCP---------IALSYGFFFF 278
G R+ T L+ C VEL Y G+G+ VI PCP A+S G FF+
Sbjct: 118 GLRAMDTGLYICKVELMYPPPYYLGIGNGTQIYVIDPEPCPDSDFLLWILAAVSSGLFFY 177

Query: 277 GIV 269
+
Sbjct: 178 SFL 180


>sp|Q9XSI1|CTLA4_CANFA Cytotoxic T-lymphocyte protein 4 OS=Canis
familiaris GN=CTLA4 PE=2 SV=1
Length = 223

Score = 29.6 bits (65), Expect = 7.6
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 15/63 (23%)
Frame = -3

Query: 412 GFRSFLTFLFFCIVELCY------GLGSSLNSPVICIVPCP---------IALSYGFFFF 278
G R+ T L+ C VEL Y G+G+ VI PCP A+S G FF+
Sbjct: 118 GLRAMGTGLYICKVELMYPPPYYVGMGNGTQIYVIDPEPCPDSDFLLWILAAVSSGLFFY 177

Query: 277 GIV 269
+
Sbjct: 178 SFL 180


>sp|A5DZS4|MCA1_LODEL Metacaspase-1 OS=Lodderomyces elongisporus
GN=MCA1 PE=3 SV=1
Length = 449

Score = 29.3 bits (64), Expect = 9.9
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 3/83 (3%)
Frame = +2

Query: 95 LLQLQSNXXXXXKVP*ISRPYASDGYS---GGPSVLYVPPPKPDTLQEGQDWSWSYGNGK 265
LLQLQ + P +GY G P Y PPP P SW YGN
Sbjct: 16 LLQLQQYNYGPPQGP------PPNGYGPPPGPPPNGYGPPPGPPPQN-----SWGYGNPS 64

Query: 266 GDNAEEKEPITERDGTRHNANDG 334
G + ++ + + N N G
Sbjct: 65 GTQSSNQQRYQGQQSGQQNYNGG 87


tr_hit_id B8LM59
Definition tr|B8LM59|B8LM59_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 109
Score (bit) 95.9
E-value 9.0e-19
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915838|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_G01.
(489 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LM59|B8LM59_PICSI Putative uncharacterized protein OS=Picea... 96 9e-19
tr|A5B813|A5B813_VITVI Putative uncharacterized protein (Fragmen... 87 1e-16
tr|A7PUD8|A7PUD8_VITVI Chromosome chr7 scaffold_31, whole genome... 87 2e-16
tr|A9U166|A9U166_PHYPA Predicted protein (Fragment) OS=Physcomit... 78 2e-13
tr|Q67IW6|Q67IW6_ORYSJ cDNA clone:002-121-F07, full insert seque... 78 3e-13
tr|B8B0F6|B8B0F6_ORYSI Putative uncharacterized protein OS=Oryza... 78 3e-13
tr|A3BDR6|A3BDR6_ORYSJ Putative uncharacterized protein OS=Oryza... 78 3e-13
tr|B6TSI8|B6TSI8_MAIZE Putative uncharacterized protein OS=Zea m... 65 2e-09
tr|B6T992|B6T992_MAIZE Putative uncharacterized protein OS=Zea m... 65 2e-09
tr|Q2V3L4|Q2V3L4_ARATH Uncharacterized protein At4g04614.1 (At4g... 60 4e-08
tr|A8JIF3|A8JIF3_CHLRE Predicted protein (Fragment) OS=Chlamydom... 50 4e-05
tr|A9UTQ3|A9UTQ3_MONBE Predicted protein OS=Monosiga brevicollis... 38 0.22
tr|B3RNX7|B3RNX7_TRIAD Putative uncharacterized protein OS=Trich... 37 0.50
tr|B5XC77|B5XC77_SALSA C1orf52 homolog OS=Salmo salar GN=CA052 P... 35 2.5
tr|Q0V113|Q0V113_PHANO Putative uncharacterized protein OS=Phaeo... 33 5.5
tr|B2UKT8|B2UKT8_AKKM8 Putative uncharacterized protein OS=Akker... 33 7.2
tr|B6SSS7|B6SSS7_MAIZE Antiporter/ drug transporter/ transporter... 33 7.2
tr|B6KCH1|B6KCH1_TOXGO Putative uncharacterized protein OS=Toxop... 33 9.3
tr|Q03DV3|Q03DV3_PEDPA Phosphotransferase system cellobiose-spec... 33 9.3
tr|B6N293|B6N293_BRAFL Putative uncharacterized protein OS=Branc... 33 9.3
tr|B6L6T0|B6L6T0_BRAFL Putative uncharacterized protein OS=Branc... 33 9.3

>tr|B8LM59|B8LM59_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 202

Score = 95.9 bits (237), Expect = 9e-19
Identities = 55/109 (50%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Frame = +2

Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAE--EKEPITERDGTRHNANDGXX 340
GY GGPSVL VPPP+ E QDWSWS G KGDN E+E ER+ TR +G
Sbjct: 77 GYYGGPSVLNVPPPRAKEPVE-QDWSWSGGKRKGDNENNHEEESYEEREQTRRAVTEGAA 135

Query: 341 XXXXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487
E N+ LSFSQKEKRKRD GQASRGKNYV
Sbjct: 136 LSAAQGIAEHNFAKKQRTELANEQRRLSFSQKEKRKRDLGQASRGKNYV 184


>tr|A5B813|A5B813_VITVI Putative uncharacterized protein (Fragment)
OS=Vitis vinifera GN=VITISV_023851 PE=4 SV=1
Length = 168

Score = 86.7 bits (213), Expect(2) = 1e-16
Identities = 52/107 (48%), Positives = 56/107 (52%)
Frame = +2

Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXX 346
GY GG SVL VPPPK D E +DWSWS G + E +E ER TR+ DG
Sbjct: 61 GYKGGLSVLSVPPPKED---EKRDWSWSTGKDRATTKEVEESYDERQKTRYAIADGEQLM 117

Query: 347 XXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487
E LSFSQKEKRKRDFGQASRGKNYV
Sbjct: 118 NVQSRNE--------------KKNLSFSQKEKRKRDFGQASRGKNYV 150



Score = 23.1 bits (48), Expect(2) = 1e-16
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +1

Query: 109 KQLEEKKKGALDFEAIRK 162
K+ ++K GA+DFEA+++
Sbjct: 42 KKSGKQKNGAIDFEALKR 59


>tr|A7PUD8|A7PUD8_VITVI Chromosome chr7 scaffold_31, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00023762001
PE=4 SV=1
Length = 136

Score = 86.7 bits (213), Expect(2) = 2e-16
Identities = 52/107 (48%), Positives = 56/107 (52%)
Frame = +2

Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXX 346
GY GG SVL VPPPK D E +DWSWS G + E +E ER TR+ DG
Sbjct: 29 GYKGGLSVLSVPPPKED---EKRDWSWSTGKDRATTKEVEESYDERQKTRYAIADGEQLM 85

Query: 347 XXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487
E LSFSQKEKRKRDFGQASRGKNYV
Sbjct: 86 NVQSRNE--------------KKNLSFSQKEKRKRDFGQASRGKNYV 118



Score = 22.3 bits (46), Expect(2) = 2e-16
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = +1

Query: 121 EKKKGALDFEAIRK 162
++K GA+DFEA+++
Sbjct: 14 KQKNGAIDFEALKR 27


>tr|A9U166|A9U166_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_37217 PE=4 SV=1
Length = 171

Score = 78.2 bits (191), Expect = 2e-13
Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Frame = +2

Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGD-NAEEKEPITERDGTRHNANDGXXX 343
GY+GG S++ VP P D QDWSWS G KG +AEE+E I R+ R ++
Sbjct: 48 GYTGGLSIMNVPAPTQDA--GDQDWSWSSGKRKGTGDAEEQESIELRERIRETISEDAEA 105

Query: 344 XXXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487
+N+ ++F+QKEKRKR+ GQASRGKNYV
Sbjct: 106 AAARAVAAYNFTKKQKRDAIAEQKAVTFAQKEKRKREMGQASRGKNYV 153


>tr|Q67IW6|Q67IW6_ORYSJ cDNA clone:002-121-F07, full insert sequence
OS=Oryza sativa subsp. japonica GN=OSJNBa0048L03.18-1
PE=2 SV=1
Length = 179

Score = 77.8 bits (190), Expect = 3e-13
Identities = 46/107 (42%), Positives = 53/107 (49%)
Frame = +2

Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXX 346
GY GGPSVL VPPPK + +WSWS G + D ++ E ER+ TR +G
Sbjct: 68 GYRGGPSVLTVPPPKVEP-----NWSWSTGKDRNDKEDQTESYEERERTRTAVTEGEKL- 121

Query: 347 XXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487
SFSQKEKRKRD GQASRGKNYV
Sbjct: 122 -------IGVRNPQPRQMEKENKDASFSQKEKRKRDRGQASRGKNYV 161


>tr|B8B0F6|B8B0F6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_23789 PE=4 SV=1
Length = 179

Score = 77.8 bits (190), Expect = 3e-13
Identities = 46/107 (42%), Positives = 53/107 (49%)
Frame = +2

Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXX 346
GY GGPSVL VPPPK + +WSWS G + D ++ E ER+ TR +G
Sbjct: 68 GYRGGPSVLTVPPPKVEP-----NWSWSTGKDRNDKEDQTESYEERERTRAAVTEGEKL- 121

Query: 347 XXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487
SFSQKEKRKRD GQASRGKNYV
Sbjct: 122 -------IGVRNPQPRQMEKENKDASFSQKEKRKRDRGQASRGKNYV 161


>tr|A3BDR6|A3BDR6_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_021188 PE=4 SV=1
Length = 130

Score = 77.8 bits (190), Expect = 3e-13
Identities = 46/107 (42%), Positives = 53/107 (49%)
Frame = +2

Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXX 346
GY GGPSVL VPPPK + +WSWS G + D ++ E ER+ TR +G
Sbjct: 19 GYRGGPSVLTVPPPKVEP-----NWSWSTGKDRNDKEDQTESYEERERTRTAVTEGEKL- 72

Query: 347 XXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487
SFSQKEKRKRD GQASRGKNYV
Sbjct: 73 -------IGVRNPQPRQMEKENKDASFSQKEKRKRDRGQASRGKNYV 112


>tr|B6TSI8|B6TSI8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 227

Score = 65.1 bits (157), Expect = 2e-09
Identities = 43/107 (40%), Positives = 48/107 (44%)
Frame = +2

Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXX 346
GY GGPSVL V P E +WSWS G + + E ER+ TR +G
Sbjct: 112 GYHGGPSVLTVRPAA-----EEPNWSWSTGKDRDGREDAPESYEERERTRAAVTEGEKFI 166

Query: 347 XXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487
SFSQKEKRKRD GQASRGKNYV
Sbjct: 167 GLQNAPP----NQLLLEKDRKEKDASFSQKEKRKRDRGQASRGKNYV 209


>tr|B6T992|B6T992_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 227

Score = 65.1 bits (157), Expect = 2e-09
Identities = 43/107 (40%), Positives = 48/107 (44%)
Frame = +2

Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXX 346
GY GGPSVL V P E +WSWS G + + E ER+ TR +G
Sbjct: 112 GYHGGPSVLTVRPAA-----EEPNWSWSTGKDRDGREDAPESYEERERTRAAVTEGEKFI 166

Query: 347 XXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487
SFSQKEKRKRD GQASRGKNYV
Sbjct: 167 GLQNAPP----NQLLLEKDRKEKDASFSQKEKRKRDRGQASRGKNYV 209


>tr|Q2V3L4|Q2V3L4_ARATH Uncharacterized protein At4g04614.1
(At4g04614) (Putative uncharacterized protein)
OS=Arabidopsis thaliana GN=At4g04614 PE=2 SV=1
Length = 176

Score = 60.5 bits (145), Expect = 4e-08
Identities = 38/87 (43%), Positives = 41/87 (47%)
Frame = +2

Query: 227 EGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXXXXXXXXEFNYXXXXXXXXXX 406
E QDWSW+ G K E KE ER+ TR A G
Sbjct: 85 EKQDWSWTTGKDKQRVEEVKESYQEREATRAAAVTGGETIANAQLRN------------- 131

Query: 407 XXXXLSFSQKEKRKRDFGQASRGKNYV 487
LSFSQKEK+KRD GQASRGKNYV
Sbjct: 132 DRKNLSFSQKEKKKRDLGQASRGKNYV 158