BP915838 |
Clone id |
YMU001_000077_G01 |
Library |
YMU01 |
Length |
489 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000077_G01. |
Accession |
BP915838 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3773Contig1 |
Sequence |
ATGGCAGGGCCATGGAGCGTAATGGATCCCCTGGCTGCCTCTTCCTCCTCCTCCTCAGAA AATTCCGATGCGAAGTCTGATGTCGATGAGGACTCTGCTGCAGCTCCAAAGCAATTAGAG GAGAAGAAGAAAGGTGCCCTAGATTTCGAGGCCATACGCAAGCGATGGATATTCAGGAGG CCCTTCTGTTCTTTATGTGCCTCCACCGAAGCCAGACACACTGCAAGAGGGCCAGGATTG GTCTTGGTCTTACGGGAATGGGAAGGGTGACAATGCCGAAGAAAAAGAACCCATAACTGA GCGCGATGGGACACGGCACAATGCAAATGACGGGGCTGTTCAGGCTGCTGCCCAGGCCGT AGCAGAGTTCAACTATGCAAAAAAACAAAAACGTGAGAAAGCTGCGGAAGCCAGTGCTCT CTCATTTTCACAAAAAGAGAAACGAAAACGCGACTTTGGTCAGGCCAGTAGAGGAAAAAA CTACGTCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7SZP2 |
Definition |
sp|Q7SZP2|CA052_DANRE UPF0690 protein C1orf52 homolog OS=Danio rerio |
Align length |
22 |
Score (bit) |
35.4 |
E-value |
0.14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LM59 |
Definition |
tr|B8LM59|B8LM59_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
109 |
Score (bit) |
95.9 |
E-value |
9.0e-19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915838|Adiantum capillus-veneris mRNA, clone: YMU001_000077_G01. (489 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LM59|B8LM59_PICSI Putative uncharacterized protein OS=Picea... 96 9e-19 tr|A5B813|A5B813_VITVI Putative uncharacterized protein (Fragmen... 87 1e-16 tr|A7PUD8|A7PUD8_VITVI Chromosome chr7 scaffold_31, whole genome... 87 2e-16 tr|A9U166|A9U166_PHYPA Predicted protein (Fragment) OS=Physcomit... 78 2e-13 tr|Q67IW6|Q67IW6_ORYSJ cDNA clone:002-121-F07, full insert seque... 78 3e-13 tr|B8B0F6|B8B0F6_ORYSI Putative uncharacterized protein OS=Oryza... 78 3e-13 tr|A3BDR6|A3BDR6_ORYSJ Putative uncharacterized protein OS=Oryza... 78 3e-13 tr|B6TSI8|B6TSI8_MAIZE Putative uncharacterized protein OS=Zea m... 65 2e-09 tr|B6T992|B6T992_MAIZE Putative uncharacterized protein OS=Zea m... 65 2e-09 tr|Q2V3L4|Q2V3L4_ARATH Uncharacterized protein At4g04614.1 (At4g... 60 4e-08 tr|A8JIF3|A8JIF3_CHLRE Predicted protein (Fragment) OS=Chlamydom... 50 4e-05 tr|A9UTQ3|A9UTQ3_MONBE Predicted protein OS=Monosiga brevicollis... 38 0.22 tr|B3RNX7|B3RNX7_TRIAD Putative uncharacterized protein OS=Trich... 37 0.50 tr|B5XC77|B5XC77_SALSA C1orf52 homolog OS=Salmo salar GN=CA052 P... 35 2.5 tr|Q0V113|Q0V113_PHANO Putative uncharacterized protein OS=Phaeo... 33 5.5 tr|B2UKT8|B2UKT8_AKKM8 Putative uncharacterized protein OS=Akker... 33 7.2 tr|B6SSS7|B6SSS7_MAIZE Antiporter/ drug transporter/ transporter... 33 7.2 tr|B6KCH1|B6KCH1_TOXGO Putative uncharacterized protein OS=Toxop... 33 9.3 tr|Q03DV3|Q03DV3_PEDPA Phosphotransferase system cellobiose-spec... 33 9.3 tr|B6N293|B6N293_BRAFL Putative uncharacterized protein OS=Branc... 33 9.3 tr|B6L6T0|B6L6T0_BRAFL Putative uncharacterized protein OS=Branc... 33 9.3
>tr|B8LM59|B8LM59_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 202
Score = 95.9 bits (237), Expect = 9e-19 Identities = 55/109 (50%), Positives = 60/109 (55%), Gaps = 2/109 (1%) Frame = +2
Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAE--EKEPITERDGTRHNANDGXX 340 GY GGPSVL VPPP+ E QDWSWS G KGDN E+E ER+ TR +G Sbjct: 77 GYYGGPSVLNVPPPRAKEPVE-QDWSWSGGKRKGDNENNHEEESYEEREQTRRAVTEGAA 135
Query: 341 XXXXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487 E N+ LSFSQKEKRKRD GQASRGKNYV Sbjct: 136 LSAAQGIAEHNFAKKQRTELANEQRRLSFSQKEKRKRDLGQASRGKNYV 184
>tr|A5B813|A5B813_VITVI Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_023851 PE=4 SV=1 Length = 168
Score = 86.7 bits (213), Expect(2) = 1e-16 Identities = 52/107 (48%), Positives = 56/107 (52%) Frame = +2
Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXX 346 GY GG SVL VPPPK D E +DWSWS G + E +E ER TR+ DG Sbjct: 61 GYKGGLSVLSVPPPKED---EKRDWSWSTGKDRATTKEVEESYDERQKTRYAIADGEQLM 117
Query: 347 XXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487 E LSFSQKEKRKRDFGQASRGKNYV Sbjct: 118 NVQSRNE--------------KKNLSFSQKEKRKRDFGQASRGKNYV 150
Score = 23.1 bits (48), Expect(2) = 1e-16 Identities = 8/18 (44%), Positives = 15/18 (83%) Frame = +1
Query: 109 KQLEEKKKGALDFEAIRK 162 K+ ++K GA+DFEA+++ Sbjct: 42 KKSGKQKNGAIDFEALKR 59
>tr|A7PUD8|A7PUD8_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023762001 PE=4 SV=1 Length = 136
Score = 86.7 bits (213), Expect(2) = 2e-16 Identities = 52/107 (48%), Positives = 56/107 (52%) Frame = +2
Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXX 346 GY GG SVL VPPPK D E +DWSWS G + E +E ER TR+ DG Sbjct: 29 GYKGGLSVLSVPPPKED---EKRDWSWSTGKDRATTKEVEESYDERQKTRYAIADGEQLM 85
Query: 347 XXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487 E LSFSQKEKRKRDFGQASRGKNYV Sbjct: 86 NVQSRNE--------------KKNLSFSQKEKRKRDFGQASRGKNYV 118
Score = 22.3 bits (46), Expect(2) = 2e-16 Identities = 7/14 (50%), Positives = 13/14 (92%) Frame = +1
Query: 121 EKKKGALDFEAIRK 162 ++K GA+DFEA+++ Sbjct: 14 KQKNGAIDFEALKR 27
>tr|A9U166|A9U166_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_37217 PE=4 SV=1 Length = 171
Score = 78.2 bits (191), Expect = 2e-13 Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 1/108 (0%) Frame = +2
Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGD-NAEEKEPITERDGTRHNANDGXXX 343 GY+GG S++ VP P D QDWSWS G KG +AEE+E I R+ R ++ Sbjct: 48 GYTGGLSIMNVPAPTQDA--GDQDWSWSSGKRKGTGDAEEQESIELRERIRETISEDAEA 105
Query: 344 XXXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487 +N+ ++F+QKEKRKR+ GQASRGKNYV Sbjct: 106 AAARAVAAYNFTKKQKRDAIAEQKAVTFAQKEKRKREMGQASRGKNYV 153
>tr|Q67IW6|Q67IW6_ORYSJ cDNA clone:002-121-F07, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBa0048L03.18-1 PE=2 SV=1 Length = 179
Score = 77.8 bits (190), Expect = 3e-13 Identities = 46/107 (42%), Positives = 53/107 (49%) Frame = +2
Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXX 346 GY GGPSVL VPPPK + +WSWS G + D ++ E ER+ TR +G Sbjct: 68 GYRGGPSVLTVPPPKVEP-----NWSWSTGKDRNDKEDQTESYEERERTRTAVTEGEKL- 121
Query: 347 XXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487 SFSQKEKRKRD GQASRGKNYV Sbjct: 122 -------IGVRNPQPRQMEKENKDASFSQKEKRKRDRGQASRGKNYV 161
>tr|B8B0F6|B8B0F6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23789 PE=4 SV=1 Length = 179
Score = 77.8 bits (190), Expect = 3e-13 Identities = 46/107 (42%), Positives = 53/107 (49%) Frame = +2
Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXX 346 GY GGPSVL VPPPK + +WSWS G + D ++ E ER+ TR +G Sbjct: 68 GYRGGPSVLTVPPPKVEP-----NWSWSTGKDRNDKEDQTESYEERERTRAAVTEGEKL- 121
Query: 347 XXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487 SFSQKEKRKRD GQASRGKNYV Sbjct: 122 -------IGVRNPQPRQMEKENKDASFSQKEKRKRDRGQASRGKNYV 161
>tr|A3BDR6|A3BDR6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021188 PE=4 SV=1 Length = 130
Score = 77.8 bits (190), Expect = 3e-13 Identities = 46/107 (42%), Positives = 53/107 (49%) Frame = +2
Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXX 346 GY GGPSVL VPPPK + +WSWS G + D ++ E ER+ TR +G Sbjct: 19 GYRGGPSVLTVPPPKVEP-----NWSWSTGKDRNDKEDQTESYEERERTRTAVTEGEKL- 72
Query: 347 XXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487 SFSQKEKRKRD GQASRGKNYV Sbjct: 73 -------IGVRNPQPRQMEKENKDASFSQKEKRKRDRGQASRGKNYV 112
>tr|B6TSI8|B6TSI8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 227
Score = 65.1 bits (157), Expect = 2e-09 Identities = 43/107 (40%), Positives = 48/107 (44%) Frame = +2
Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXX 346 GY GGPSVL V P E +WSWS G + + E ER+ TR +G Sbjct: 112 GYHGGPSVLTVRPAA-----EEPNWSWSTGKDRDGREDAPESYEERERTRAAVTEGEKFI 166
Query: 347 XXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487 SFSQKEKRKRD GQASRGKNYV Sbjct: 167 GLQNAPP----NQLLLEKDRKEKDASFSQKEKRKRDRGQASRGKNYV 209
>tr|B6T992|B6T992_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 227
Score = 65.1 bits (157), Expect = 2e-09 Identities = 43/107 (40%), Positives = 48/107 (44%) Frame = +2
Query: 167 GYSGGPSVLYVPPPKPDTLQEGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXX 346 GY GGPSVL V P E +WSWS G + + E ER+ TR +G Sbjct: 112 GYHGGPSVLTVRPAA-----EEPNWSWSTGKDRDGREDAPESYEERERTRAAVTEGEKFI 166
Query: 347 XXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKNYV 487 SFSQKEKRKRD GQASRGKNYV Sbjct: 167 GLQNAPP----NQLLLEKDRKEKDASFSQKEKRKRDRGQASRGKNYV 209
>tr|Q2V3L4|Q2V3L4_ARATH Uncharacterized protein At4g04614.1 (At4g04614) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At4g04614 PE=2 SV=1 Length = 176
Score = 60.5 bits (145), Expect = 4e-08 Identities = 38/87 (43%), Positives = 41/87 (47%) Frame = +2
Query: 227 EGQDWSWSYGNGKGDNAEEKEPITERDGTRHNANDGXXXXXXXXXXEFNYXXXXXXXXXX 406 E QDWSW+ G K E KE ER+ TR A G Sbjct: 85 EKQDWSWTTGKDKQRVEEVKESYQEREATRAAAVTGGETIANAQLRN------------- 131
Query: 407 XXXXLSFSQKEKRKRDFGQASRGKNYV 487 LSFSQKEK+KRD GQASRGKNYV Sbjct: 132 DRKNLSFSQKEKKKRDLGQASRGKNYV 158
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