NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915839
Clone id YMU001_000077_G03
Library
Length 576
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000077_G03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CGGCCGTCCTTTTGAGAGAATGAGGTAGACAGGCTGAAGCTCACAGCGTGCTATATATTG
TTTGGTTGCGCTACGATATCAAATTCTAGGAATTGTTTGGTTGCGCTACGATATTGTTTG
GTAGCGCAAAGTTCAAACCCTCGGGAAACATTTCTGCTCGTAATCGCATTGTCTTAGGCC
TGTGTCACACACGGGCACCGGACATGCTTACACGGGAGCCCATTTGGGTGCCTGTATTGC
CACTTATATAGACAGACAAATATATTCATACTTTTTGCTAAGCACTTCAAGAATCAGAGG
TAATCAGTTGACAAAGACTGATCCGCACGACAGTGGAATGTACACATCGAACCCGCCTAT
TGCTAATCACGCACATGATTTTTTTCATGTCCAAACTCCGGAGTCCACAGTCAAGCAGAG
TGGCATCATGCTCTGACGATATGTGCTCTTGCCATCTCATTTACAGACACTTTTGGGTGG
ATGTGGCAAGACACCAAGTCCCATGGGCTCTAAGCCACGACTTTGACAACAGACAACGTT
TGTCTATATTTACTACTATGTAACCTGCACATTGCT
■■Homology search results ■■ -
sp_hit_id Q9NV72
Definition sp|Q9NV72|ZN701_HUMAN Zinc finger protein 701 OS=Homo sapiens
Align length 84
Score (bit) 32.7
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915839|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_G03.
         (576 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9NV72|ZN701_HUMAN Zinc finger protein 701 OS=Homo sapiens GN...    33   1.3  
sp|Q96K76|UBP47_HUMAN Ubiquitin carboxyl-terminal hydrolase 47 O...    32   3.0  
sp|P79845|CRVP_TRIMU Cysteine-rich venom protein OS=Trimeresurus...    32   3.0  
sp|A7FJT1|Y2544_YERP3 UPF0268 protein YpsIP31758_2544 OS=Yersini...    30   8.6  
sp|Q66CF1|Y1452_YERPS UPF0268 protein YPTB1452 OS=Yersinia pseud...    30   8.6  
sp|Q8ZG78|Y1433_YERPE UPF0268 protein YPO1433/y2737/YP_0877 OS=Y...    30   8.6  
sp|Q8BY87|UBP47_MOUSE Ubiquitin carboxyl-terminal hydrolase 47 O...    30   8.6  

>sp|Q9NV72|ZN701_HUMAN Zinc finger protein 701 OS=Homo sapiens
           GN=ZNF701 PE=2 SV=1
          Length = 465

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 10/84 (11%)
 Frame = +2

Query: 182 VSHTGTGHAYTGAHLGACIATYIDRQIYSY-FLLSTSRIRGNQ---------LTKTDPHD 331
           V HTGT   +   H+G      I++ I+ + F    +   G++         ++ T+ HD
Sbjct: 68  VVHTGTLQIHASHHIGDTCFQEIEKDIHDFVFQWQENETNGHEALMTKIKKLMSSTERHD 127

Query: 332 SGMYTSNPPIANHAHDFFHVQTPE 403
              +  N PI N     FH   PE
Sbjct: 128 Q-RHAGNKPIKNELGSSFHSHLPE 150


>sp|Q96K76|UBP47_HUMAN Ubiquitin carboxyl-terminal hydrolase 47
           OS=Homo sapiens GN=USP47 PE=1 SV=2
          Length = 1375

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +2

Query: 182 VSHTGTGHAYTGAHLGACIATYIDRQIYSYFLLSTSRIRGNQLTKTDPHDSG 337
           ++H+G+     G H  ACI ++ D Q YS+     SRI    + KT    SG
Sbjct: 493 MAHSGSA---AGGHYYACIKSFSDEQWYSFDDQHVSRITQEDIKKTHGGSSG 541


>sp|P79845|CRVP_TRIMU Cysteine-rich venom protein OS=Trimeresurus
           mucrosquamatus PE=2 SV=2
          Length = 240

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
 Frame = +2

Query: 185 SHTGTGH----AYTGAHLGACIATYIDRQIYSYFLLSTSRIRGNQLTKTDPHDSGMYTSN 352
           S+  TGH     +  ++ G C A Y     Y YF +      GN + KT    +  YTS 
Sbjct: 128 SNAATGHYTQIVWYKSYRGGCAAAYCPSSKYRYFYVCQYCPAGNMIGKT----ATPYTSG 183

Query: 353 PPIANHAHD 379
           PP  +   D
Sbjct: 184 PPCGDCPSD 192


>sp|A7FJT1|Y2544_YERP3 UPF0268 protein YpsIP31758_2544 OS=Yersinia
           pseudotuberculosis serotype O:1b (strain IP 31758)
           GN=YpsIP31758_2544 PE=3 SV=1
          Length = 151

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
 Frame = -3

Query: 523 KSWLRAHGTWCLATSTQKCL*MRWQEHISSEHDATLLDCGLRSLDMKKI----MCVISNR 356
           + W+ AH    LAT  ++ +  R + H ++EH  T      +S+D++ +    + V++ R
Sbjct: 55  QEWIDAHMNVNLATRMKQTIRARRKRHFNAEHQHT----RKKSIDLEFLVWQRLAVLARR 110

Query: 355 RVRCVHSTVVRI 320
           R   +  TVV++
Sbjct: 111 RGNTLSDTVVQL 122


>sp|Q66CF1|Y1452_YERPS UPF0268 protein YPTB1452 OS=Yersinia
           pseudotuberculosis GN=YPTB1452 PE=3 SV=1
          Length = 151

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
 Frame = -3

Query: 523 KSWLRAHGTWCLATSTQKCL*MRWQEHISSEHDATLLDCGLRSLDMKKI----MCVISNR 356
           + W+ AH    LAT  ++ +  R + H ++EH  T      +S+D++ +    + V++ R
Sbjct: 55  QEWIDAHMNVNLATRMKQTIRARRKRHFNAEHQHT----RKKSIDLEFLVWQRLAVLARR 110

Query: 355 RVRCVHSTVVRI 320
           R   +  TVV++
Sbjct: 111 RGNTLSDTVVQL 122


>sp|Q8ZG78|Y1433_YERPE UPF0268 protein YPO1433/y2737/YP_0877
           OS=Yersinia pestis GN=YPO1433 PE=3 SV=1
          Length = 151

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
 Frame = -3

Query: 523 KSWLRAHGTWCLATSTQKCL*MRWQEHISSEHDATLLDCGLRSLDMKKI----MCVISNR 356
           + W+ AH    LAT  ++ +  R + H ++EH  T      +S+D++ +    + V++ R
Sbjct: 55  QEWIDAHMNVNLATRMKQTIRARRKRHFNAEHQHT----RKKSIDLEFLVWQRLAVLARR 110

Query: 355 RVRCVHSTVVRI 320
           R   +  TVV++
Sbjct: 111 RGNTLSDTVVQL 122


>sp|Q8BY87|UBP47_MOUSE Ubiquitin carboxyl-terminal hydrolase 47
           OS=Mus musculus GN=Usp47 PE=1 SV=2
          Length = 1376

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +2

Query: 188 HTGTGHAYTGAHLGACIATYIDRQIYSYFLLSTSRIRGNQLTKTDPHDSG 337
           H+G+     G H  ACI ++ D Q YS+     SRI    + KT    SG
Sbjct: 495 HSGSA---AGGHYYACIKSFSDDQWYSFNDQHVSRITQEDIKKTHGGSSG 541
tr_hit_id B3CJ03
Definition tr|B3CJ03|B3CJ03_9BACE Putative uncharacterized protein OS=Bacteroides intestinalis DSM 17393
Align length 68
Score (bit) 37.0
E-value 0.77
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915839|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_G03.
         (576 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3CJ03|B3CJ03_9BACE Putative uncharacterized protein OS=Bacte...    37   0.77 
tr|A7V233|A7V233_BACUN Polyphosphate kinase OS=Bacteroides unifo...    36   1.3  
tr|B6KSV9|B6KSV9_TOXGO Putative uncharacterized protein OS=Toxop...    36   1.3  
tr|B4KR25|B4KR25_DROMO GI21050 OS=Drosophila mojavensis GN=GI210...    35   3.0  
tr|Q5B1U2|Q5B1U2_EMENI Putative uncharacterized protein OS=Emeri...    34   5.0  
tr|Q64PX4|Q64PX4_BACFR Polyphosphate kinase OS=Bacteroides fragi...    34   6.5  
tr|Q5L9N2|Q5L9N2_BACFN Polyphosphate kinase OS=Bacteroides fragi...    34   6.5  
tr|Q2GUY0|Q2GUY0_CHAGB Putative uncharacterized protein OS=Chaet...    33   8.6  

>tr|B3CJ03|B3CJ03_9BACE Putative uncharacterized protein
           OS=Bacteroides intestinalis DSM 17393 GN=BACINT_04955
           PE=4 SV=1
          Length = 689

 Score = 37.0 bits (84), Expect = 0.77
 Identities = 21/68 (30%), Positives = 35/68 (51%)
 Frame = +2

Query: 251 DRQIYSYFLLSTSRIRGNQLTKTDPHDSGMYTSNPPIANHAHDFFHVQTPESTVKQSGIM 430
           D+++ SY  +ST     N+ T T   DSG++T NP I N  H+ F     +       ++
Sbjct: 450 DKKLTSYAYISTGNF--NEKTATLYADSGLFTCNPIIVNDLHNLFRTLRGKENPVFHRLL 507

Query: 431 L*RYVLLP 454
           + R+ L+P
Sbjct: 508 VARFNLIP 515


>tr|A7V233|A7V233_BACUN Polyphosphate kinase OS=Bacteroides
           uniformis ATCC 8492 GN=BACUNI_01622 PE=3 SV=1
          Length = 688

 Score = 36.2 bits (82), Expect = 1.3
 Identities = 21/67 (31%), Positives = 34/67 (50%)
 Frame = +2

Query: 254 RQIYSYFLLSTSRIRGNQLTKTDPHDSGMYTSNPPIANHAHDFFHVQTPESTVKQSGIML 433
           R++ SY  +ST     N+ T T   DSG++T NP I N  H+ F     +       +++
Sbjct: 449 RKLTSYAYISTGNF--NEKTATLYADSGLFTCNPVIVNDLHNLFRTLQGKENPVFHRLLV 506

Query: 434 *RYVLLP 454
            R+ L+P
Sbjct: 507 ARFNLIP 513


>tr|B6KSV9|B6KSV9_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_017160 PE=4 SV=1
          Length = 327

 Score = 36.2 bits (82), Expect = 1.3
 Identities = 18/78 (23%), Positives = 37/78 (47%)
 Frame = +1

Query: 37  KLTACYILFGCATISNSRNCLVALRYCLVAQSSNPRETFLLVIALS*ACVTHGHRTCLHG 216
           ++ +C++ FG  ++    N  V + YC   +      TFL ++  + A +        H 
Sbjct: 54  RIFSCFLFFGTFSLHFFWNVYVLIFYCATLEEHQRSATFLWMLLTTGALLLIPPYLRTHF 113

Query: 217 SPFGCLYCHLYRQTNIFI 270
            P+ C+Y +++  T I+I
Sbjct: 114 HPYFCIYIYIFIYTYIYI 131


>tr|B4KR25|B4KR25_DROMO GI21050 OS=Drosophila mojavensis GN=GI21050
           PE=4 SV=1
          Length = 859

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 19/45 (42%), Positives = 24/45 (53%)
 Frame = +1

Query: 67  CATISNSRNCLVALRYCLVAQSSNPRETFLLVIALS*ACVTHGHR 201
           C TI N ++C  A +Y L A S N  ET L + + S  C T G R
Sbjct: 245 CGTILNPKSCASAAKYSLHAASENNHETQLHLSSASSHCSTTGRR 289


>tr|Q5B1U2|Q5B1U2_EMENI Putative uncharacterized protein
           OS=Emericella nidulans GN=AN5488.2 PE=4 SV=1
          Length = 1401

 Score = 34.3 bits (77), Expect = 5.0
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 182 VSHTGTGHAYTGAHLGACIATYIDRQIYSYF 274
           V H G GH  T A +   IA  +DRQ+ SYF
Sbjct: 889 VLHLGLGHVLTSAVISVVIAQSVDRQVLSYF 919


>tr|Q64PX4|Q64PX4_BACFR Polyphosphate kinase OS=Bacteroides fragilis
           GN=BF3714 PE=3 SV=1
          Length = 691

 Score = 33.9 bits (76), Expect = 6.5
 Identities = 19/71 (26%), Positives = 37/71 (52%)
 Frame = +2

Query: 242 TYIDRQIYSYFLLSTSRIRGNQLTKTDPHDSGMYTSNPPIANHAHDFFHVQTPESTVKQS 421
           ++   +I+SY  +ST     N+ T T   D G++TSNP I +   + F     +   + +
Sbjct: 447 SFTGEKIHSYAYISTGNF--NEKTATLYADCGLFTSNPVIVHDLTNLFRTLRGKENPRFT 504

Query: 422 GIML*RYVLLP 454
            +++ R+ L+P
Sbjct: 505 RLLVARFNLIP 515


>tr|Q5L9N2|Q5L9N2_BACFN Polyphosphate kinase OS=Bacteroides fragilis
           (strain ATCC 25285 / NCTC 9343) GN=ppk PE=3 SV=1
          Length = 698

 Score = 33.9 bits (76), Expect = 6.5
 Identities = 19/71 (26%), Positives = 37/71 (52%)
 Frame = +2

Query: 242 TYIDRQIYSYFLLSTSRIRGNQLTKTDPHDSGMYTSNPPIANHAHDFFHVQTPESTVKQS 421
           ++   +I+SY  +ST     N+ T T   D G++TSNP I +   + F     +   + +
Sbjct: 454 SFTGEKIHSYAYISTGNF--NEKTATLYADCGLFTSNPVIVHDLTNLFRTLRGKENPRFT 511

Query: 422 GIML*RYVLLP 454
            +++ R+ L+P
Sbjct: 512 RLLVARFNLIP 522


>tr|Q2GUY0|Q2GUY0_CHAGB Putative uncharacterized protein
           OS=Chaetomium globosum GN=CHGG_08224 PE=4 SV=1
          Length = 1827

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
 Frame = +2

Query: 164 SHCLRPVSHTGTGH--AYTGAHLGACIATYIDRQIYSYFLLSTSRIRGNQLTKTDPHDSG 337
           S  L P SH G  H  AY        +  Y     +S+     + + G++  + DP +  
Sbjct: 515 SRLLLPASHNGDDHSSAYANRFGAGELDGYEFNDEFSHMTHDATGMDGDKENR-DPDEDS 573

Query: 338 MYTSNPPIANHAHDFFHVQTPESTV 412
           +  ++PPI +  HD    +TPE  V
Sbjct: 574 ILPTHPPIFDLTHDSSPFETPELVV 598