BP915847 |
Clone id |
YMU001_000077_H02 |
Library |
YMU01 |
Length |
513 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000077_H02. |
Accession |
BP915847 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL69Contig1 |
Sequence |
AATTCGCGGCCGCGAATTCTTCCAGAATACTTGGTCACACCCTCAGTAGAGGCATGAGCT CGGTGAGCTGTGCCAAAGGCATCATTGACATAGAGATCAGCTACAGAGGCAAGCTTCTTG GCATGCTCAGGTTCATTCTTCTCTTCCTCCTTGTAGAACCTCACATTCTCCAAAAGCAGC ACTCCACCATCAGGTAGAGCAGCCACTTTCTTCTCCACTTCCTCTCCGATCGAGTCGTCA GCCTTTTCCACCTTGAAGCCTAGTAGTTCAGACAACCTTGGAACCAAAGGGTTCAATCTG AATTTCTCTGTGACACCCTTGGGACGCCCCAGATGGGTAGTGAGGATGACCTTGGCACCA TTCTCGGTGAGGTACTTGATAGTGGGAATGGCAGCACGAATGCGAGTATCGTCAGTGATC TTCAAACTGTCATCAAGAGGTACATTCAAATCGGCCCTCACAAAAACCTTCTTGCCCTTG AGGTCAGCCTCCTTAAGATCTCCCACGCTCCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P50318 |
Definition |
sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana |
Align length |
162 |
Score (bit) |
268.0 |
E-value |
1.0e-71 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915847|Adiantum capillus-veneris mRNA, clone: YMU001_000077_H02. (488 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=A... 268 1e-71 sp|P12783|PGKY_WHEAT Phosphoglycerate kinase, cytosolic OS=Triti... 267 2e-71 sp|P29409|PGKH_SPIOL Phosphoglycerate kinase, chloroplastic (Fra... 267 2e-71 sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=N... 262 7e-70 sp|Q42962|PGKY_TOBAC Phosphoglycerate kinase, cytosolic OS=Nicot... 259 5e-69 sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplastic OS=T... 256 3e-68 sp|Q9SBN4|PGKH_VOLCA Phosphoglycerate kinase, chloroplastic OS=V... 238 1e-62 sp|P41758|PGKH_CHLRE Phosphoglycerate kinase, chloroplastic OS=C... 238 1e-62 sp|Q3MF40|PGK_ANAVT Phosphoglycerate kinase OS=Anabaena variabil... 228 9e-60 sp|Q8YPR1|PGK_ANASP Phosphoglycerate kinase OS=Anabaena sp. (str... 226 3e-59 sp|Q7NI70|PGK_GLOVI Phosphoglycerate kinase OS=Gloeobacter viola... 213 4e-55 sp|Q10Z46|PGK_TRIEI Phosphoglycerate kinase OS=Trichodesmium ery... 212 6e-55 sp|B0CD95|PGK_ACAM1 Phosphoglycerate kinase OS=Acaryochloris mar... 210 3e-54 sp|A5GW73|PGK_SYNR3 Phosphoglycerate kinase OS=Synechococcus sp.... 203 3e-52 sp|Q31P73|PGK_SYNE7 Phosphoglycerate kinase OS=Synechococcus elo... 201 2e-51 sp|P74421|PGK_SYNY3 Phosphoglycerate kinase OS=Synechocystis sp.... 200 3e-51 sp|Q5N4Z6|PGK_SYNP6 Phosphoglycerate kinase OS=Synechococcus sp.... 199 7e-51 sp|A8FHJ3|PGK_BACP2 Phosphoglycerate kinase OS=Bacillus pumilus ... 199 7e-51 sp|Q7V390|PGK_PROMP Phosphoglycerate kinase OS=Prochlorococcus m... 198 9e-51 sp|A2BUH2|PGK_PROM5 Phosphoglycerate kinase OS=Prochlorococcus m... 198 9e-51 sp|Q3AFD1|PGK_CARHZ Phosphoglycerate kinase OS=Carboxydothermus ... 198 9e-51 sp|P24269|PGK_BACME Phosphoglycerate kinase OS=Bacillus megateri... 198 1e-50 sp|A5GPB2|PGK_SYNPW Phosphoglycerate kinase OS=Synechococcus sp.... 197 2e-50 sp|Q67SW6|PGK_SYMTH Phosphoglycerate kinase OS=Symbiobacterium t... 196 4e-50 sp|Q8DGP7|PGK_THEEB Phosphoglycerate kinase OS=Thermosynechococc... 196 5e-50 sp|Q7V461|PGK_PROMM Phosphoglycerate kinase OS=Prochlorococcus m... 196 5e-50 sp|Q3AGU1|PGK_SYNSC Phosphoglycerate kinase OS=Synechococcus sp.... 195 8e-50 sp|Q3AVX6|PGK_SYNS9 Phosphoglycerate kinase OS=Synechococcus sp.... 195 8e-50 sp|Q0I6M5|PGK_SYNS3 Phosphoglycerate kinase OS=Synechococcus sp.... 194 1e-49 sp|A2CDG7|PGK_PROM3 Phosphoglycerate kinase OS=Prochlorococcus m... 194 1e-49
>sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2 Length = 478
Score = 268 bits (685), Expect = 1e-71 Identities = 136/162 (83%), Positives = 146/162 (90%) Frame = -2
Query: 487 RSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILTTH 308 +SVGDL DLKGKKVFVRADLNVPLDD+ ITDDTRIRAAIPTIK+L ENGAKVIL+TH Sbjct: 77 KSVGDLNSVDLKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKFLIENGAKVILSTH 136
Query: 307 LGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFY 128 LGRPKGVT KF L PLVPRLSELLG +V KADD IG EVE VA+LP+GGVLLLENVRFY Sbjct: 137 LGRPKGVTPKFSLAPLVPRLSELLGIEVVKADDCIGPEVETLVASLPEGGVLLLENVRFY 196
Query: 127 KEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 KEEEKNEP+ AKKLAS+ADLYVNDAFGTAHRAHASTEGVTK+ Sbjct: 197 KEEEKNEPDFAKKLASLADLYVNDAFGTAHRAHASTEGVTKF 238
>sp|P12783|PGKY_WHEAT Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1 Length = 401
Score = 267 bits (682), Expect = 2e-71 Identities = 138/162 (85%), Positives = 144/162 (88%) Frame = -2
Query: 487 RSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILTTH 308 RSVG L EADLKGKKVFVRADLNVPLDD+ KITDDTRIRA+IPTIKYL E GAKVIL +H Sbjct: 5 RSVGTLGEADLKGKKVFVRADLNVPLDDAQKITDDTRIRASIPTIKYLLEKGAKVILASH 64
Query: 307 LGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFY 128 LGRPKGVT KF L PLV RLSELLG +V A D IGEEVEK AALPDGGVLLLENVRFY Sbjct: 65 LGRPKGVTPKFSLKPLVARLSELLGLEVVMAPDCIGEEVEKLAAALPDGGVLLLENVRFY 124
Query: 127 KEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 KEEEKN+PE AKKLASVADLYVNDAFGTAHRAHASTEGVTK+ Sbjct: 125 KEEEKNDPEFAKKLASVADLYVNDAFGTAHRAHASTEGVTKF 166
>sp|P29409|PGKH_SPIOL Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2 Length = 433
Score = 267 bits (682), Expect = 2e-71 Identities = 136/162 (83%), Positives = 146/162 (90%) Frame = -2
Query: 487 RSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILTTH 308 +SVGDL ADLKGKKVFVRADLNVPLDDS ITDDTRIRAAIPTIK+L NGAKVIL++H Sbjct: 32 KSVGDLTSADLKGKKVFVRADLNVPLDDSQNITDDTRIRAAIPTIKHLINNGAKVILSSH 91
Query: 307 LGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFY 128 LGRPKGVT KF L PLVPRLSELLG +V KADD IG +VEK VA LP+GGVLLLENVRFY Sbjct: 92 LGRPKGVTPKFSLAPLVPRLSELLGLQVVKADDCIGPDVEKLVAELPEGGVLLLENVRFY 151
Query: 127 KEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 KEEEKN+PE AKKLAS+ADLYVNDAFGTAHRAHASTEGVTK+ Sbjct: 152 KEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKF 193
>sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 481
Score = 262 bits (669), Expect = 7e-70 Identities = 132/162 (81%), Positives = 146/162 (90%) Frame = -2
Query: 487 RSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILTTH 308 +SVGDL A+LKGKKVFVRADLNVPLDD+ ITDDTRIRAA+PTIK+L NGAKVIL++H Sbjct: 79 KSVGDLTAAELKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLMANGAKVILSSH 138
Query: 307 LGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFY 128 LGRPKGVT K+ L PLVPRLSELLG +V K +D IG EVEK VA+LP+GGVLLLENVRFY Sbjct: 139 LGRPKGVTPKYSLAPLVPRLSELLGIQVVKVEDCIGPEVEKLVASLPEGGVLLLENVRFY 198
Query: 127 KEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 KEEEKNEPE AKKLAS+ADLYVNDAFGTAHRAHASTEGVTK+ Sbjct: 199 KEEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKF 240
>sp|Q42962|PGKY_TOBAC Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1 Length = 401
Score = 259 bits (662), Expect = 5e-69 Identities = 129/162 (79%), Positives = 145/162 (89%) Frame = -2
Query: 487 RSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILTTH 308 +SVG LKEADLKGK+VFVR DLNVPLD++ ITDDTRIRAA+PTIKYL ++G+ VIL +H Sbjct: 5 KSVGSLKEADLKGKRVFVRVDLNVPLDENFNITDDTRIRAAVPTIKYLMQHGSHVILASH 64
Query: 307 LGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFY 128 LGRPKGVT K+ L PLVPRLSELLG +V+ A+DSIG EVEK VA +P+GGVLLLENVRFY Sbjct: 65 LGRPKGVTPKYSLKPLVPRLSELLGVEVKIANDSIGPEVEKLVAEIPEGGVLLLENVRFY 124
Query: 127 KEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 KEEEKNEPE AKKLAS+ADLYVNDAFGTAHRAHASTEGV KY Sbjct: 125 KEEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKY 166
>sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1 Length = 480
Score = 256 bits (655), Expect = 3e-68 Identities = 131/162 (80%), Positives = 144/162 (88%) Frame = -2
Query: 487 RSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILTTH 308 +SVGDL ADL+GK+V VRADLNVPLDD+ ITDDTRIRAAIPTIKYL NGAKVILT+H Sbjct: 76 KSVGDLTAADLEGKRVLVRADLNVPLDDNQNITDDTRIRAAIPTIKYLLSNGAKVILTSH 135
Query: 307 LGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFY 128 LGRPKGVT KF L PLVPRLSELLG +V+KA+D IG EVEK VA L +G VLLLENVRFY Sbjct: 136 LGRPKGVTPKFSLAPLVPRLSELLGIEVKKAEDVIGPEVEKLVADLANGAVLLLENVRFY 195
Query: 127 KEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 KEEEKN+PE AKKLAS+ADL+VNDAFGTAHRAHASTEGVTK+ Sbjct: 196 KEEEKNDPEFAKKLASLADLFVNDAFGTAHRAHASTEGVTKF 237
>sp|Q9SBN4|PGKH_VOLCA Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1 Length = 462
Score = 238 bits (607), Expect = 1e-62 Identities = 124/164 (75%), Positives = 143/164 (87%), Gaps = 2/164 (1%) Frame = -2
Query: 487 RSVGDLKEADLKGKKVFVRADLNVPLDD-SLKITDDTRIRAAIPTIKYLTENGAKVILTT 311 +SVGDL +ADL+GK+VFVRADLNVPLD +L ITDDTRIRAA+PT+KYL +NGAKV+LT+ Sbjct: 64 KSVGDLGKADLEGKRVFVRADLNVPLDKKTLAITDDTRIRAAVPTLKYLLDNGAKVLLTS 123
Query: 310 HLGRPKGVTE-KFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVR 134 HLGRPKG E K+RL P+V RLSELLG +V+K DD IG VE+ VA+L G +LLLENVR Sbjct: 124 HLGRPKGGPEDKYRLTPVVARLSELLGKEVKKVDDCIGPSVEQAVASLKSGELLLLENVR 183
Query: 133 FYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 FYKEEEKN+PE AKKLAS ADLYVNDAFGTAHRAHASTEGVTK+ Sbjct: 184 FYKEEEKNDPEFAKKLASNADLYVNDAFGTAHRAHASTEGVTKF 227
>sp|P41758|PGKH_CHLRE Phosphoglycerate kinase, chloroplastic OS=Chlamydomonas reinhardtii PE=1 SV=1 Length = 461
Score = 238 bits (606), Expect = 1e-62 Identities = 124/164 (75%), Positives = 141/164 (85%), Gaps = 2/164 (1%) Frame = -2
Query: 487 RSVGDLKEADLKGKKVFVRADLNVPLDDS-LKITDDTRIRAAIPTIKYLTENGAKVILTT 311 +SVGDL +ADL+GK+VFVRADLNVPLD + L ITDDTRIRAA+PT+KYL +NGAKV+LT+ Sbjct: 63 KSVGDLHKADLEGKRVFVRADLNVPLDKATLAITDDTRIRAAVPTLKYLLDNGAKVLLTS 122
Query: 310 HLGRPKGVTE-KFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVR 134 HLGRPKG E K+RL P+V RLSELLG V K DD IG EVEK V A+ +G +LLLEN R Sbjct: 123 HLGRPKGGPEDKYRLTPVVARLSELLGKPVTKVDDCIGPEVEKAVGAMKNGELLLLENCR 182
Query: 133 FYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 FYKEEEKNEPE AKKLA+ ADLYVNDAFGTAHRAHASTEGVTK+ Sbjct: 183 FYKEEEKNEPEFAKKLAANADLYVNDAFGTAHRAHASTEGVTKF 226
>sp|Q3MF40|PGK_ANAVT Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1 Length = 400
Score = 228 bits (582), Expect = 9e-60 Identities = 116/162 (71%), Positives = 131/162 (80%) Frame = -2
Query: 487 RSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILTTH 308 ++V L AD+ GK+ VR D NVPLDD ITDDTRIRAA+PTI+ LT+ GAKVIL +H Sbjct: 4 KTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVILASH 63
Query: 307 LGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFY 128 GRPKGV EK RL P+ RLSELLG +V K DDSIG+EV KVAAL +G VLLLENVRFY Sbjct: 64 FGRPKGVDEKLRLTPVAKRLSELLGQEVVKTDDSIGDEVAAKVAALQNGQVLLLENVRFY 123
Query: 127 KEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 KEEEKN+PE AKKLA+ AD YVNDAFGTAHRAHASTEGVTK+ Sbjct: 124 KEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKF 165
>sp|Q8YPR1|PGK_ANASP Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1 Length = 400
Score = 226 bits (577), Expect = 3e-59 Identities = 115/162 (70%), Positives = 130/162 (80%) Frame = -2
Query: 487 RSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILTTH 308 ++V L AD+ GK+ VR D NVPLDD ITDDTRIRAA+PTI+ LT+ GAKVIL +H Sbjct: 4 KTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVILASH 63
Query: 307 LGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFY 128 GRPKGV EK RL P+ RLSELLG +V K DDSIG+EV KVA L +G VLLLENVRFY Sbjct: 64 FGRPKGVDEKLRLTPVAKRLSELLGQEVIKTDDSIGDEVAAKVATLQNGQVLLLENVRFY 123
Query: 127 KEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKY 2 KEEEKN+PE AKKLA+ AD YVNDAFGTAHRAHASTEGVTK+ Sbjct: 124 KEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKF 165
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QD34 |
Definition |
tr|A7QD34|A7QD34_VITVI Phosphoglycerate kinase OS=Vitis vinifera |
Align length |
162 |
Score (bit) |
272.0 |
E-value |
5.0e-72 |
Report |
|