BP915852
Clone id YMU001_000077_H09
Library
Length 520
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000077_H09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTGCCAGGCGACAATGAACCACTGCCTGATGTTGCACGTCGGATGTTCGAACCTCCTCTA
AGAGCTTGGGCAGTTCCAAAAGAACGCAGTGAGCCACAAGAAGATCCGACAGCGCAAAAA
CCACCTCTCCTTCTAGGTGGGGCTCCACCCAGTAGTTAGCTAGGTGCGTACCTTACAAAG
CTGAACAGCATTATGTTCCTTCGTCAGGTCATCTACTTAAGTTCGTATCTTGAAGACCCA
CAATTTTCGTGAAACGCATGGAGCTCCCCCTTCGGCATGGAAATGGTTTTCTTGAAGCTG
GACTTGTGTGCTTCCATGCAAGCTGTATTGTTAATATATTGTCTTGTCACTTTCAAATGG
TTACAGCAGCTCTCTTGCTAGGAGGCAATTACTCAGCACAGATGTCGCGCCTGGGTAGTT
GCCATGTCTGCTGCTTTTGGTCTTTTCCATTGGGCTAGCATCGCTACTTGGGAAATTCCT
TGCTACCTTGTACACCTGTCTCGCCATGATTTGTCAAATT
■■Homology search results ■■ -
sp_hit_id Q863G0
Definition sp|Q863G0|COX81_ATEBE Cytochrome c oxidase polypeptide 8H, mitochondrial OS=Ateles belzebuth
Align length 29
Score (bit) 30.8
E-value 4.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915852|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_H09.
(520 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q863G0|COX81_ATEBE Cytochrome c oxidase polypeptide 8H, mitoc... 31 4.0
sp|Q99PD6|TGFI1_RAT Transforming growth factor beta-1-induced tr... 30 6.9
sp|Q62219|TGFI1_MOUSE Transforming growth factor beta-1-induced ... 30 6.9
sp|P10175|COX81_BOVIN Cytochrome c oxidase polypeptide 8H, mitoc... 30 6.9
sp|P55934|CNG_ICTPU Cyclic nucleotide-gated cation channel OS=Ic... 30 8.8
sp|Q863F8|COX81_EULFU Cytochrome c oxidase polypeptide 8H, mitoc... 30 9.0

>sp|Q863G0|COX81_ATEBE Cytochrome c oxidase polypeptide 8H,
mitochondrial OS=Ateles belzebuth GN=COX8H PE=3 SV=1
Length = 70

Score = 30.8 bits (68), Expect = 4.0
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +1

Query: 34 ARRMFEPPLRAWAVPKER--SEPQEDPTA 114
A R+ + PLR WAVPK ++P E PT+
Sbjct: 7 ALRLLQAPLRCWAVPKAHVSAKPAETPTS 35


>sp|Q99PD6|TGFI1_RAT Transforming growth factor beta-1-induced
transcript 1 protein OS=Rattus norvegicus GN=Tgfb1i1
PE=1 SV=2
Length = 461

Score = 30.0 bits (66), Expect = 6.9
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = -2

Query: 420 NYPGATSVL--SNCLLARELL*PFESDKTIY*QYSLHGSTQVQLQENHFHAEGGAPCVS 250
NY A S L +C + RE L PF S L ENHFHA+ G+ C +
Sbjct: 356 NYISALSALWHPDCFVCRECLAPFSGG-------SFFEHEGRPLCENHFHAQRGSLCAT 407


>sp|Q62219|TGFI1_MOUSE Transforming growth factor beta-1-induced
transcript 1 protein OS=Mus musculus GN=Tgfb1i1 PE=1
SV=2
Length = 461

Score = 30.0 bits (66), Expect = 6.9
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = -2

Query: 420 NYPGATSVL--SNCLLARELL*PFESDKTIY*QYSLHGSTQVQLQENHFHAEGGAPCVS 250
NY A S L +C + RE L PF S L ENHFHA+ G+ C +
Sbjct: 356 NYISALSALWHPDCFVCRECLAPFSGG-------SFFEHEGRPLCENHFHAQRGSLCAT 407


>sp|P10175|COX81_BOVIN Cytochrome c oxidase polypeptide 8H,
mitochondrial OS=Bos taurus GN=COX8H PE=1 SV=3
Length = 70

Score = 30.0 bits (66), Expect = 6.9
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +1

Query: 40 RMFEPPLRAWAVPKER--SEPQEDPTAQK 120
R+ + PLR WAVPK ++P + PT+ K
Sbjct: 9 RLLQAPLRGWAVPKAHITAKPAKTPTSPK 37


>sp|P55934|CNG_ICTPU Cyclic nucleotide-gated cation channel
OS=Ictalurus punctatus PE=2 SV=1
Length = 682

Score = 29.6 bits (65), Expect = 8.8
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = +3

Query: 192 YVPSS--GHLLKFVS*RPTIFVKRMELPLRHGNGFLEAGLVCFHASCIVNILSCHFQMVT 365
YVP LL+F R F R E + N F L+ + I++ +C + ++
Sbjct: 238 YVPQLRFNRLLRFS--RMFEFFDRTETRTNYPNAFRICNLILY-ILVIIHWNACIYYAIS 294

Query: 366 AALLLGGN---YSAQMSRLGSCHVCCF-WS 443
AL L + YS Q L C+V CF WS
Sbjct: 295 KALGLSSDTWVYSGQNKTLSFCYVYCFYWS 324


>sp|Q863F8|COX81_EULFU Cytochrome c oxidase polypeptide 8H,
mitochondrial OS=Eulemur fulvus fulvus GN=COX8H PE=3
SV=1
Length = 70

Score = 29.6 bits (65), Expect = 9.0
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1

Query: 34 ARRMFEPPLRAWAVPK--ERSEPQEDPTA 114
A R+ +PPLR W VPK ++P PT+
Sbjct: 7 ALRLLQPPLRCWVVPKLHVSAKPARTPTS 35


tr_hit_id A7PNQ5
Definition tr|A7PNQ5|A7PNQ5_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera
Align length 28
Score (bit) 44.7
E-value 0.003
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915852|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_H09.
(520 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PNQ5|A7PNQ5_VITVI Chromosome chr8 scaffold_23, whole genome... 45 0.003
tr|B8A143|B8A143_MAIZE Putative uncharacterized protein OS=Zea m... 44 0.006
tr|B6U627|B6U627_MAIZE Armadillo/beta-catenin-like repeat family... 44 0.006
tr|B6TK50|B6TK50_MAIZE Armadillo/beta-catenin-like repeat family... 44 0.006
tr|Q9M346|Q9M346_ARATH Putative uncharacterized protein F5K20_10... 42 0.018
tr|Q8GZ58|Q8GZ58_ARATH Putative uncharacterized protein At3g5380... 42 0.018
tr|Q852A6|Q852A6_ORYSJ Os03g0822700 protein OS=Oryza sativa subs... 41 0.041
tr|Q10BD2|Q10BD2_ORYSJ cDNA clone:001-037-A06, full insert seque... 41 0.041
tr|A2XNH4|A2XNH4_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.041
tr|Q9SR28|Q9SR28_ARATH F3L24.22 protein OS=Arabidopsis thaliana ... 40 0.069
tr|Q8LDQ1|Q8LDQ1_ARATH Putative uncharacterized protein OS=Arabi... 40 0.069
tr|Q84J81|Q84J81_ARATH Putative uncharacterized protein At3g0935... 40 0.069
tr|B8LQZ3|B8LQZ3_PICSI Putative uncharacterized protein OS=Picea... 40 0.069
tr|A9NXJ2|A9NXJ2_PICSI Putative uncharacterized protein OS=Picea... 40 0.069
tr|A8MQ87|A8MQ87_ARATH Uncharacterized protein At3g09350.2 OS=Ar... 40 0.069
tr|B6SQD6|B6SQD6_MAIZE Putative uncharacterized protein OS=Zea m... 33 6.5

>tr|A7PNQ5|A7PNQ5_VITVI Chromosome chr8 scaffold_23, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021351001
PE=4 SV=1
Length = 357

Score = 44.7 bits (104), Expect = 0.003
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1

Query: 1 LPGDNEPLPDVARRMFEPPLRAWAVPKE 84
LPGD+ P PDVA + FEPPLRAWA +E
Sbjct: 284 LPGDDAPPPDVASKHFEPPLRAWAANQE 311


>tr|B8A143|B8A143_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 372

Score = 43.5 bits (101), Expect = 0.006
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +1

Query: 1 LPGDN---EPLPDVARRMFEPPLRAWAVPKERSEPQEDPTAQK 120
LPG++ +P PDVA +MFEPPLRAWA + E D + K
Sbjct: 321 LPGEDAPQQPPPDVAGKMFEPPLRAWAAARPAQEDDSDSGSGK 363


>tr|B6U627|B6U627_MAIZE Armadillo/beta-catenin-like repeat family
protein OS=Zea mays PE=2 SV=1
Length = 372

Score = 43.5 bits (101), Expect = 0.006
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +1

Query: 1 LPGDN---EPLPDVARRMFEPPLRAWAVPKERSEPQEDPTAQK 120
LPG++ +P PDVA +MFEPPLRAWA + E D + K
Sbjct: 321 LPGEDAPQQPPPDVAGKMFEPPLRAWAAARPAQEDDSDSGSGK 363


>tr|B6TK50|B6TK50_MAIZE Armadillo/beta-catenin-like repeat family
protein OS=Zea mays PE=2 SV=1
Length = 372

Score = 43.5 bits (101), Expect = 0.006
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +1

Query: 1 LPGDN---EPLPDVARRMFEPPLRAWAVPKERSEPQEDPTAQK 120
LPG++ +P PDVA +MFEPPLRAWA + E D + K
Sbjct: 321 LPGEDAPQQPPPDVAGKMFEPPLRAWAAARPAQEDDSDSGSGK 363


>tr|Q9M346|Q9M346_ARATH Putative uncharacterized protein F5K20_100
OS=Arabidopsis thaliana GN=F5K20_100 PE=2 SV=1
Length = 363

Score = 42.0 bits (97), Expect = 0.018
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = +1

Query: 1 LPGDNEPLPDVARRMFEPPLRAWAVPKERSEPQEDP 108
LP D+E PDV R FEPPLRAWA + E E P
Sbjct: 320 LPSDDELAPDVVRDRFEPPLRAWAA-RRHDETSESP 354


>tr|Q8GZ58|Q8GZ58_ARATH Putative uncharacterized protein
At3g53800/F5K20_100 OS=Arabidopsis thaliana
GN=At3g53800/F5K20_100 PE=2 SV=1
Length = 362

Score = 42.0 bits (97), Expect = 0.018
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = +1

Query: 1 LPGDNEPLPDVARRMFEPPLRAWAVPKERSEPQEDP 108
LP D+E PDV R FEPPLRAWA + E E P
Sbjct: 319 LPSDDELAPDVVRDRFEPPLRAWAA-RRHDETSESP 353


>tr|Q852A6|Q852A6_ORYSJ Os03g0822700 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0081B07.19 PE=4 SV=1
Length = 379

Score = 40.8 bits (94), Expect = 0.041
Identities = 22/40 (55%), Positives = 26/40 (65%), Gaps = 7/40 (17%)
Frame = +1

Query: 1 LPGDN---EPLPDVARRMFEPPLRAWAV----PKERSEPQ 99
LPG++ +P PDV MFEPPLRAWA PKE SE +
Sbjct: 324 LPGEDAPQQPPPDVVGSMFEPPLRAWAASRPPPKEDSESE 363


>tr|Q10BD2|Q10BD2_ORYSJ cDNA clone:001-037-A06, full insert sequence
OS=Oryza sativa subsp. japonica GN=LOC_Os03g60780 PE=2
SV=1
Length = 305

Score = 40.8 bits (94), Expect = 0.041
Identities = 22/40 (55%), Positives = 26/40 (65%), Gaps = 7/40 (17%)
Frame = +1

Query: 1 LPGDN---EPLPDVARRMFEPPLRAWAV----PKERSEPQ 99
LPG++ +P PDV MFEPPLRAWA PKE SE +
Sbjct: 250 LPGEDAPQQPPPDVVGSMFEPPLRAWAASRPPPKEDSESE 289


>tr|A2XNH4|A2XNH4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_14114 PE=4 SV=1
Length = 379

Score = 40.8 bits (94), Expect = 0.041
Identities = 22/40 (55%), Positives = 26/40 (65%), Gaps = 7/40 (17%)
Frame = +1

Query: 1 LPGDN---EPLPDVARRMFEPPLRAWAV----PKERSEPQ 99
LPG++ +P PDV MFEPPLRAWA PKE SE +
Sbjct: 324 LPGEDAPQQPPPDVVGSMFEPPLRAWAASRPPPKEDSESE 363


>tr|Q9SR28|Q9SR28_ARATH F3L24.22 protein OS=Arabidopsis thaliana
GN=F3L24.22 PE=4 SV=1
Length = 387

Score = 40.0 bits (92), Expect = 0.069
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +1

Query: 1 LPGDNEPLPDVARRMFEPPLRAWAVPKERSEPQEDP 108
LPG++ PDVA ++FEPPLRA A + +E +++P
Sbjct: 346 LPGEDALPPDVASKLFEPPLRASAANRNATEKKDEP 381