BP915856
Clone id YMU001_000078_B09
Library
Length 466
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000078_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGCGCCCGTTGGTCGAGGGCGAGGATGCCGGGCCACATTGCCCACAGTTCAAGGTGCAAG
GGCGATGATGGGTTTCTGTAAGCTGTAGCCTGTTGGCCGCTACACTGGCAAAGAATATGC
TTTTTAACCTCCAGTCAAGGCTTTGTAATTTTCCCTCTTTATCACCAACATTTCTACATT
TGCCACCATCGACATACATTCTTGCTATGTCTGTTCGCGTCTGGCAAAGCGAGCCACATC
GTCATCCATGTCGTTATCTAGATCCCTACAGTATCCTGGATCATCCAAGTCAGAGCTGTC
TTCCTTCGTTGTTGCTTGATGTCACGCATGTCCATAGATGCAGGTAGGGTATTTGTGCAC
TTGCTCTAACATGCTGTTGTGACCTGGTAGTTTACAATCCCAATTGTTACAACACTTCAT
TAATTGTGCGGTGTCTACAATCCTGTTACCTTATATGGTGTATACT
■■Homology search results ■■ -
sp_hit_id Q03157
Definition sp|Q03157|APLP1_MOUSE Amyloid-like protein 1 OS=Mus musculus
Align length 98
Score (bit) 30.8
E-value 3.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915856|Adiantum capillus-veneris mRNA, clone:
YMU001_000078_B09.
(466 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q03157|APLP1_MOUSE Amyloid-like protein 1 OS=Mus musculus GN=... 31 3.0
sp|Q80957|VE1_HPV66 Replication protein E1 OS=Human papillomavir... 31 3.1
sp|Q7TSN6|GP151_MOUSE Probable G-protein coupled receptor 151 pr... 30 5.1
sp|Q9XGN1|TTG1_ARATH Protein TRANSPARENT TESTA GLABRA 1 OS=Arabi... 30 6.7
sp|Q96SL8|FIZ1_HUMAN Flt3-interacting zinc finger protein 1 OS=H... 30 6.8

>sp|Q03157|APLP1_MOUSE Amyloid-like protein 1 OS=Mus musculus
GN=Aplp1 PE=1 SV=1
Length = 653

Score = 30.8 bits (68), Expect = 3.0
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 10/98 (10%)
Frame = +3

Query: 30 GPHCPQFKVQGR*WVSVSCSLLAATLAKNMLFNLQSRLCNFPSLSPTFLHLPPSTYILAM 209
GP P + QGR W LL +L +L Q + N SP+ P S + +
Sbjct: 2 GPTSPAARGQGRRWRPPLPLLLPLSL---LLLRAQLAVGNLAVGSPSAAEAPGSAQVAGL 58

Query: 210 SVRV----------WQSEPHRHPCRYLDPYSILDHPSQ 293
R+ W+ +P R LDP +L++ Q
Sbjct: 59 CGRLTLHRDLRTGRWEPDPQRSRRCLLDPQRVLEYCRQ 96


>sp|Q80957|VE1_HPV66 Replication protein E1 OS=Human papillomavirus
type 66 GN=E1 PE=3 SV=1
Length = 630

Score = 30.8 bits (68), Expect = 3.1
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = -2

Query: 414 CCNNWDCKLPGHNSMLEQVHK---YPTCIYGH 328
CCN+W C + G N L + K P C+Y H
Sbjct: 213 CCNDWICAIFGVNETLAEALKTILKPQCVYYH 244


>sp|Q7TSN6|GP151_MOUSE Probable G-protein coupled receptor 151
protein OS=Mus musculus GN=Gpr151 PE=2 SV=1
Length = 422

Score = 30.0 bits (66), Expect = 5.1
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -3

Query: 401 GIVNYQVTTAC*SKCTNTLPASMDMRDIKQQRRKTALTWMIQDTVGI*ITTWMTMWLA 228
G+ ++ C ++CT T R+++ Q R LT M+ T I W+ W+A
Sbjct: 223 GVYFWRAYDQCKTRCTKT-------RNLRDQMRSKQLTVMLLSTAIISALLWLPEWIA 273


>sp|Q9XGN1|TTG1_ARATH Protein TRANSPARENT TESTA GLABRA 1
OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1
Length = 341

Score = 29.6 bits (65), Expect = 6.7
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = +3

Query: 162 SPTFLHLPPSTYILAMS---VRVWQSEPHRHPCRYLDPYSILDHP--SQSCLPSLLLDVT 326
SP L P S +LA S +R+W+ ++P S+L++ S+ C P D
Sbjct: 85 SPPSLRRPSSGDLLASSGDFLRLWEINEDSST---VEPISVLNNSKTSEFCAPLTSFDWN 141

Query: 327 HVHRCR*GICALALTC 374
V R G C++ TC
Sbjct: 142 DVEPKRLGTCSIDTTC 157


>sp|Q96SL8|FIZ1_HUMAN Flt3-interacting zinc finger protein 1 OS=Homo
sapiens GN=FIZ1 PE=1 SV=1
Length = 496

Score = 29.6 bits (65), Expect = 6.8
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -1

Query: 115 FFASVAANRLQLTETHHRPCTLNCGQCG 32
FFAS AA L E H P T CG CG
Sbjct: 338 FFASAAALASHL-EAHSGPATYGCGHCG 364


tr_hit_id B4M5N6
Definition tr|B4M5N6|B4M5N6_DROVI GJ10613 OS=Drosophila virilis
Align length 101
Score (bit) 35.0
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915856|Adiantum capillus-veneris mRNA, clone:
YMU001_000078_B09.
(466 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4M5N6|B4M5N6_DROVI GJ10613 OS=Drosophila virilis GN=GJ10613 ... 35 1.8
tr|A1WG38|A1WG38_VEREI Oligopeptide/dipeptide ABC transporter, A... 33 9.1
tr|A4S198|A4S198_OSTLU Predicted protein OS=Ostreococcus lucimar... 33 9.4

>tr|B4M5N6|B4M5N6_DROVI GJ10613 OS=Drosophila virilis GN=GJ10613
PE=4 SV=1
Length = 514

Score = 35.0 bits (79), Expect = 1.8
Identities = 26/101 (25%), Positives = 43/101 (42%)
Frame = +3

Query: 114 NMLFNLQSRLCNFPSLSPTFLHLPPSTYILAMSVRVWQSEPHRHPCRYLDPYSILDHPSQ 293
+M+++L S NF SL P + +TY + + R RHP PY+ L +
Sbjct: 285 SMVYHLYSNTENFLSLDPVVIQTSTNTYEMDPAKRRCYFHNERHP---YFPYTSLPYSRA 341

Query: 294 SCLPSLLLDVTHVHRCR*GICALALTCCCDLVVYNPNCYNT 416
+C+ + L H H C C L ++ P+ +T
Sbjct: 342 NCIATCLQWSVHHH------------CKCTLPIHLPSIDDT 370


>tr|A1WG38|A1WG38_VEREI Oligopeptide/dipeptide ABC transporter,
ATPase subunit OS=Verminephrobacter eiseniae (strain
EF01-2) GN=Veis_0815 PE=3 SV=1
Length = 339

Score = 32.7 bits (73), Expect = 9.1
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3

Query: 138 RLCNFPSLSPTFLHLPPSTYILAMSVRV 221
RLC P L+P LHLPP+ A RV
Sbjct: 272 RLCQIPGLTPNLLHLPPTCAFAARCERV 299


>tr|A4S198|A4S198_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_16416 PE=4 SV=1
Length = 260

Score = 32.7 bits (73), Expect = 9.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2

Query: 432 TAQLMKCCNNWDCKLPGHNSMLEQVHKYPTCIYGHA*HQATTKED 298
TA MK C NW+ + H +E HK T Y + HQA +D
Sbjct: 5 TANRMKLCQNWNKQPRAHIDTIEVTHKVSTVRYAKS-HQAVHLDD 48