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NBDC - LSDB Archive
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BP915880
Clone id YMU001_000079_A06
Library
Length 570
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000079_A06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTTAGAGCCAGGCCTGTCCCACCACCTCCTTGCGATGAGCTCGCACTAATCTGAATGTAG
GGCTCAAAAAGAATCGCCTGATCTTCTTTTCTGATCCCTATACCCGTATCCTCAACAAAT
ACTGTGATGCTTGCAACTTTACCTGTGGTTTTTACTGACAAGCACTTGCCACTTTTCGAA
AGCCCAAGTTGCCGTATAAATGTCTCCTTCTCCTCCAAAAATGTCCCATCACTGGATGCA
GAATCAATACTTGAAGTGTTTGTGCACACAATTCTCAGTGTTACTCTGCCACCACGAGGA
GTAAACTTTGTGGCCTTTGAAAGATAGTTTGCGAGAACCTGACGCACACGATGCTGGTCT
CCAAGAAGATCATAGCTTGATAGCAGCTGCTTTGTGGAAGGGTCTATGCACAAAGAGAAC
TGAACACCCTTCGAGGCCATTGTATCCTTAAAAGCCCATACCAAAGAGCTGACCATCTCG
CCCATATTAAATGGCTGCTTCTCTAGATGCAACTTTCCAGCTTCAATTTTTCCCATGTCA
AGAACATCGTTAAGGATGCGAATCATAGAG
■■Homology search results ■■ -
sp_hit_id Q54RP6
Definition sp|Q54RP6|DHKL_DICDI Hybrid signal transduction histidine kinase L OS=Dictyostelium discoideum
Align length 171
Score (bit) 71.2
E-value 3.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915880|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_A06.
         (570 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q54RP6|DHKL_DICDI Hybrid signal transduction histidine kinase...    71   3e-12
sp|Q54Q69|DHKG_DICDI Hybrid signal transduction histidine kinase...    68   4e-11
sp|Q9KLK7|LUXQ_VIBCH Autoinducer 2 sensor kinase/phosphatase lux...    67   5e-11
sp|Q54YH4|DHKB_DICDI Hybrid signal transduction histidine kinase...    67   8e-11
sp|Q55E44|DHKE_DICDI Hybrid signal transduction histidine kinase...    66   1e-10
sp|Q87GU5|LUXQ_VIBPA Autoinducer 2 sensor kinase/phosphatase lux...    65   2e-10
sp|P37894|PLEC_CAUCR Non-motile and phage-resistance protein OS=...    65   2e-10
sp|P59342|BARA_SHIFL Signal transduction histidine-protein kinas...    63   9e-10
sp|P0AEC5|BARA_ECOLI Signal transduction histidine-protein kinas...    63   9e-10
sp|P0AEC6|BARA_ECOL6 Signal transduction histidine-protein kinas...    63   9e-10
sp|P0AEC7|BARA_ECO57 Signal transduction histidine-protein kinas...    63   9e-10
sp|Q7MD16|LUXQ_VIBVY Autoinducer 2 sensor kinase/phosphatase lux...    63   1e-09
sp|Q8D5Z6|LUXQ_VIBVU Autoinducer 2 sensor kinase/phosphatase lux...    63   1e-09
sp|P54302|LUXQ_VIBHA Autoinducer 2 sensor kinase/phosphatase lux...    62   2e-09
sp|Q54U87|DHKA_DICDI Hybrid signal transduction histidine kinase...    62   2e-09
sp|P48027|GACS_PSESY Sensor protein gacS OS=Pseudomonas syringae...    62   2e-09
sp|P20169|DSPA_SYNY3 Drug sensory protein A OS=Synechocystis sp....    62   2e-09
sp|Q03228|DIVJ_CAUCR Histidine protein kinase divJ OS=Caulobacte...    60   1e-08
sp|Q54SP4|DHKD_DICDI Hybrid signal transduction histidine kinase...    58   3e-08
sp|P26762|BVGS_BORBR Virulence sensor protein bvgS OS=Bordetella...    58   3e-08
sp|Q86CZ2|DHKK_DICDI Hybrid signal transduction histidine kinase...    58   4e-08
sp|P40330|BVGS_BORPA Virulence sensor protein bvgS OS=Bordetella...    58   4e-08
sp|Q52969|Y1002_RHIME Uncharacterized sensor-like histidine kina...    57   6e-08
sp|Q9P4U6|TCSB_EMENI Two-component system protein B OS=Emericell...    57   6e-08
sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein rpfC OS=Xanthomo...    56   1e-07
sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein rpfC OS=Xanthomo...    56   1e-07
sp|Q39557|PHY2_CERPU Phytochrome 2 OS=Ceratodon purpureus GN=PHY...    56   1e-07
sp|P16575|BVGS_BORPE Virulence sensor protein bvgS OS=Bordetella...    55   2e-07
sp|P33529|PHY_MOUSC Phytochrome OS=Mougeotia scalaris GN=PHY PE=...    54   7e-07
sp|Q9P7Q7|MAK1_SCHPO Peroxide stress-activated histidine kinase ...    53   9e-07

>sp|Q54RP6|DHKL_DICDI Hybrid signal transduction histidine kinase L
            OS=Dictyostelium discoideum GN=dhkL PE=3 SV=1
          Length = 1709

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 49/171 (28%), Positives = 76/171 (44%)
 Frame = -2

Query: 569  SMIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTK 390
            +++ I+ND+LD+ KIEAGKL ++ + F+    VS +V +    + SKG++    +DP   
Sbjct: 878  TLLTIINDILDISKIEAGKLDIDYESFDFNATVSQVVESMAQRVQSKGLELLSYVDPKIP 937

Query: 389  QLLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSIDSASSDGTFLEE 210
             +     L+G   R+ Q+L N L  + KFT +G    + I C      DS          
Sbjct: 938  NI-----LIGPSSRLNQILTNLLGNSLKFTDKG---EISICCLLNDETDSE--------- 980

Query: 209  KETFIRQLGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
                                       I V V DTGIGI+KE   +LF+ +
Sbjct: 981  -------------------------YEIKVDVRDTGIGIKKEALPLLFKAF 1006


>sp|Q54Q69|DHKG_DICDI Hybrid signal transduction histidine kinase G
            OS=Dictyostelium discoideum GN=dhkG PE=3 SV=1
          Length = 3432

 Score = 67.8 bits (164), Expect = 4e-11
 Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
 Frame = -2

Query: 569  SMIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTK 390
            S++ ++N++LD+ K+E GK  L    FN+   +   + A       KGV  +L I+P   
Sbjct: 2534 SLLFMVNNILDLSKVEQGKTKLNLTNFNLVSFLEDSICAISPNAHLKGVYIALFINP--- 2590

Query: 389  QLLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRI----------------VCTN 258
              LS   ++GD + +RQV+ N L+ A KFT   G+V +++                + T+
Sbjct: 2591 -CLSKIPVIGDINILRQVIVNLLTNAIKFT-ESGQVYIKLNLSINNNPTTTNNKKQLNTD 2648

Query: 257  TSSIDSASSDGTFLEEKETFIRQLGLSKSGKCLSVKT--TGKVASITVFVEDTGIGIRKE 84
                D    D   L+E       + L  +GK +  K   + +   + + V D+GIGI+ E
Sbjct: 2649 NDGDDDDDDDNENLDENNE-DTSIDLDDNGKVIYQKNPKSNQCYIVNIEVVDSGIGIKNE 2707

Query: 83   DQAILFEPY 57
            D   LF+ +
Sbjct: 2708 DFGKLFQRF 2716


>sp|Q9KLK7|LUXQ_VIBCH Autoinducer 2 sensor kinase/phosphatase luxQ
           OS=Vibrio cholerae GN=luxQ PE=3 SV=1
          Length = 857

 Score = 67.4 bits (163), Expect = 5e-11
 Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
 Frame = -2

Query: 566 MIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTKQ 387
           ++ +LND+LD  ++E GK  ++K  F + E+V ++   ++     KG++  +  + +T  
Sbjct: 528 LLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVNSNITTAA 587

Query: 386 LLSSYDLLGDQHRVRQVLANYLSKATKFTPRGG-RVTLRIVCTNTSSIDSASSDGTFLEE 210
           ++ S     DQ R+ Q+L N L+ A KFT +G  RV L+++                   
Sbjct: 588 IVRS-----DQIRINQILFNLLNNAIKFTHQGSIRVELQLI------------------- 623

Query: 209 KETFIRQLGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
                                   +A + + V DTGIGIR++D  ++FEP+
Sbjct: 624 --------------------EGDPLAQLVIQVVDTGIGIREQDLTVIFEPF 654


>sp|Q54YH4|DHKB_DICDI Hybrid signal transduction histidine kinase B
            OS=Dictyostelium discoideum GN=dhkB PE=1 SV=1
          Length = 1969

 Score = 66.6 bits (161), Expect = 8e-11
 Identities = 34/109 (31%), Positives = 64/109 (58%)
 Frame = -2

Query: 566  MIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTKQ 387
            ++ ++ND+LD  KIEAGK+ + K  F++ +M+ + +      +  KG+   + IDP+   
Sbjct: 1009 LLDLINDILDYSKIEAGKMEIIKYDFSILKMLDNSIRIVSKNIYEKGLDLCIFIDPNVPV 1068

Query: 386  LLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSIDS 240
            +++     GDQ R++Q+L N+LS + KFT   G++ +R+   +  S  S
Sbjct: 1069 IVN-----GDQRRIKQILLNFLSNSIKFT-NHGQIIIRVKLESDDSTHS 1111


>sp|Q55E44|DHKE_DICDI Hybrid signal transduction histidine kinase E
            OS=Dictyostelium discoideum GN=dhkE PE=3 SV=1
          Length = 1699

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 15/185 (8%)
 Frame = -2

Query: 566  MIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTKQ 387
            ++ ++ D+LD  KIEAGK  L++  FN+  M+   +     T   +G++    IDP    
Sbjct: 720  LLDLITDILDFSKIEAGKFELDRVEFNLITMLEESINIVYRTAQERGIEVLTFIDPDVPI 779

Query: 386  LLSSYDLLGDQHRVRQVLANYLSKATKFTPRGG-RVTLRIV---------CTNTSSIDSA 237
            +     L+GD +RV+Q + N+LS A KFT +G   V + IV           N ++ ++ 
Sbjct: 780  I-----LIGDPYRVKQCVLNFLSNAIKFTHKGQVMVKVSIVDQINNNNNNNNNNNNNNNN 834

Query: 236  SSDGTFLEEKETFIRQLGLSKSGKCLSVKTTGKVASITVF-----VEDTGIGIRKEDQAI 72
            +++           + +G S +    +         I  F     VED+G+GI++E    
Sbjct: 835  NNNNNNNNNNNNNNKIVGFSNNNNNNNNNNNNGNNGILNFKLSFSVEDSGVGIKEEVLDC 894

Query: 71   LFEPY 57
            LF P+
Sbjct: 895  LFTPF 899


>sp|Q87GU5|LUXQ_VIBPA Autoinducer 2 sensor kinase/phosphatase luxQ
           OS=Vibrio parahaemolyticus GN=luxQ PE=3 SV=1
          Length = 858

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 48/170 (28%), Positives = 76/170 (44%)
 Frame = -2

Query: 566 MIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTKQ 387
           ++ +LND+LD  KIE GK +++K PF+  + + +L   ++    +KGV+  +       Q
Sbjct: 530 LLAVLNDILDFSKIEQGKFNIQKHPFSFADTMRTLENIYRPICENKGVELVI-----ENQ 584

Query: 386 LLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSIDSASSDGTFLEEK 207
           L  + ++  DQ R+ Q+L N +S A KFTP G        C    +            E 
Sbjct: 585 LDGNVEIFTDQVRLNQILFNLVSNAVKFTPSG--------CVRLHA------------EL 624

Query: 206 ETFIRQLGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
           E F    G   S              + V + DTGIGI  +    +FEP+
Sbjct: 625 EQF---YGADNS-------------VLVVEISDTGIGIESDKLDEMFEPF 658


>sp|P37894|PLEC_CAUCR Non-motile and phage-resistance protein
            OS=Caulobacter crescentus GN=pleC PE=1 SV=2
          Length = 842

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 51/170 (30%), Positives = 77/170 (45%)
 Frame = -2

Query: 566  MIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTKQ 387
            ++ ++ND+LDM KIEAGK++L+ +  ++ ++    V   ++   + G++    +D    Q
Sbjct: 653  LLALINDILDMSKIEAGKMNLKFESMHLEDVAEDAVRLVRNRAEAAGLK----LDIDFPQ 708

Query: 386  LLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSIDSASSDGTFLEEK 207
            L    ++  D   V+QVL N LS A KFTPR G VT+R                      
Sbjct: 709  LP---EIEADYRAVKQVLLNLLSNAIKFTPRAGSVTVR---------------------- 743

Query: 206  ETFIRQLGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
                             V+       I V V DTGIGI KED A L +P+
Sbjct: 744  ---------------AEVRRDPFGDLIKVSVTDTGIGIAKEDLARLAKPF 778


>sp|P59342|BARA_SHIFL Signal transduction histidine-protein kinase
           barA OS=Shigella flexneri GN=barA PE=3 SV=1
          Length = 918

 Score = 63.2 bits (152), Expect = 9e-10
 Identities = 51/171 (29%), Positives = 78/171 (45%)
 Frame = -2

Query: 569 SMIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTK 390
           +++ I+NDVLD  K+EAGKL LE  PF +   +  +V     +   KG++ +L I     
Sbjct: 340 NLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVP 399

Query: 389 QLLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSIDSASSDGTFLEE 210
                 +++GD  R++Q++ N +  A KFT  G             +ID        L E
Sbjct: 400 D-----NVIGDPLRLQQIITNLVGNAIKFTENG-------------NID-------ILVE 434

Query: 209 KETFIRQLGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
           K    R L  +K               I V + DTGIGI + DQ+ LF+ +
Sbjct: 435 K----RALSNTK-------------VQIEVQIRDTGIGIPERDQSRLFQAF 468


>sp|P0AEC5|BARA_ECOLI Signal transduction histidine-protein kinase
           barA OS=Escherichia coli (strain K12) GN=barA PE=1 SV=1
          Length = 918

 Score = 63.2 bits (152), Expect = 9e-10
 Identities = 51/171 (29%), Positives = 78/171 (45%)
 Frame = -2

Query: 569 SMIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTK 390
           +++ I+NDVLD  K+EAGKL LE  PF +   +  +V     +   KG++ +L I     
Sbjct: 340 NLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVP 399

Query: 389 QLLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSIDSASSDGTFLEE 210
                 +++GD  R++Q++ N +  A KFT  G             +ID        L E
Sbjct: 400 D-----NVIGDPLRLQQIITNLVGNAIKFTENG-------------NID-------ILVE 434

Query: 209 KETFIRQLGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
           K    R L  +K               I V + DTGIGI + DQ+ LF+ +
Sbjct: 435 K----RALSNTK-------------VQIEVQIRDTGIGIPERDQSRLFQAF 468


>sp|P0AEC6|BARA_ECOL6 Signal transduction histidine-protein kinase
           barA OS=Escherichia coli O6 GN=barA PE=3 SV=1
          Length = 918

 Score = 63.2 bits (152), Expect = 9e-10
 Identities = 51/171 (29%), Positives = 78/171 (45%)
 Frame = -2

Query: 569 SMIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTK 390
           +++ I+NDVLD  K+EAGKL LE  PF +   +  +V     +   KG++ +L I     
Sbjct: 340 NLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVP 399

Query: 389 QLLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSIDSASSDGTFLEE 210
                 +++GD  R++Q++ N +  A KFT  G             +ID        L E
Sbjct: 400 D-----NVIGDPLRLQQIITNLVGNAIKFTENG-------------NID-------ILVE 434

Query: 209 KETFIRQLGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
           K    R L  +K               I V + DTGIGI + DQ+ LF+ +
Sbjct: 435 K----RALSNTK-------------VQIEVQIRDTGIGIPERDQSRLFQAF 468
tr_hit_id Q4KBT5
Definition tr|Q4KBT5|Q4KBT5_PSEF5 Sensor protein OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
Align length 171
Score (bit) 85.5
E-value 2.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915880|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_A06.
         (570 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4KBT5|Q4KBT5_PSEF5 Sensor protein OS=Pseudomonas fluorescens...    86   2e-15
tr|B2FQ27|B2FQ27_STRMK Putative two-component sensor histidine k...    83   1e-14
tr|Q15YK2|Q15YK2_PSEA6 Sensor protein OS=Pseudoalteromonas atlan...    82   3e-14
tr|A1WZ03|A1WZ03_HALHL Sensor protein OS=Halorhodospira halophil...    80   8e-14
tr|B4AX79|B4AX79_9CHRO Multi-sensor hybrid histidine kinase OS=C...    80   1e-13
tr|A0YY73|A0YY73_9CYAN Sensor protein OS=Lyngbya sp. PCC 8106 GN...    80   1e-13
tr|A7Q0L9|A7Q0L9_VITVI Chromosome chr7 scaffold_42, whole genome...    80   1e-13
tr|A5BEQ3|A5BEQ3_VITVI Putative uncharacterized protein OS=Vitis...    80   1e-13
tr|B5E7Y7|B5E7Y7_GEOBB Multi-sensor hybrid histidine kinase OS=G...    78   3e-13
tr|B0MC32|B0MC32_9FIRM Sensor protein OS=Anaerostipes caccae DSM...    77   5e-13
tr|Q7UEX5|Q7UEX5_RHOBA Sensor protein OS=Rhodopirellula baltica ...    77   7e-13
tr|Q1K469|Q1K469_DESAC Sensor protein OS=Desulfuromonas acetoxid...    77   7e-13
tr|Q3KBS6|Q3KBS6_PSEPF Sensor protein OS=Pseudomonas fluorescens...    77   9e-13
tr|B2J8F4|B2J8F4_NOSP7 Multi-sensor hybrid histidine kinase OS=N...    77   9e-13
tr|A8ZX44|A8ZX44_DESOH Sensor protein OS=Desulfococcus oleovoran...    77   9e-13
tr|A1WUR8|A1WUR8_HALHL Sensor protein OS=Halorhodospira halophil...    77   9e-13
tr|Q2BLH0|Q2BLH0_9GAMM Sensor protein OS=Neptuniibacter caesarie...    77   9e-13
tr|Q2Q1D4|Q2Q1D4_ORYSI Hybrid type histidine kinase isoform a OS...    77   9e-13
tr|Q0YII0|Q0YII0_9DELT Sensor protein OS=Geobacter sp. FRC-32 GN...    76   1e-12
tr|B4WZE2|B4WZE2_9GAMM ATPase, histidine kinase-, DNA gyrase B-,...    76   1e-12
tr|A6CUR2|A6CUR2_9VIBR Sensor protein OS=Vibrio shilonii AK1 GN=...    76   1e-12
tr|B8IUE5|B8IUE5_METNO Multi-sensor hybrid histidine kinase OS=M...    76   1e-12
tr|B8ID60|B8ID60_METNO Multi-sensor hybrid histidine kinase OS=M...    76   1e-12
tr|B5VU52|B5VU52_SPIMA Multi-sensor hybrid histidine kinase OS=A...    76   1e-12
tr|B4VNF9|B4VNF9_9CYAN ATPase, histidine kinase-, DNA gyrase B-,...    76   1e-12
tr|Q9FZK3|Q9FZK3_ARATH F17L21.11 OS=Arabidopsis thaliana PE=4 SV=1     76   1e-12
tr|Q9C5U1|Q9C5U1_ARATH Histidine kinase OS=Arabidopsis thaliana ...    76   1e-12
tr|Q5JJP1|Q5JJP1_ORYSJ Putative histidine kinase 2 OS=Oryza sati...    76   1e-12
tr|Q0JGH3|Q0JGH3_ORYSJ Os01g0923700 protein (Fragment) OS=Oryza ...    76   1e-12
tr|B8QJH2|B8QJH2_BETVE Histidine kinase 3 (Fragment) OS=Betula v...    76   1e-12

>tr|Q4KBT5|Q4KBT5_PSEF5 Sensor protein OS=Pseudomonas fluorescens
           (strain Pf-5 / ATCC BAA-477) GN=PFL_3193 PE=4 SV=1
          Length = 945

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 55/171 (32%), Positives = 88/171 (51%)
 Frame = -2

Query: 569 SMIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTK 390
           ++++++ DVLD+ KIEAG+L LE   F+  ++V  ++  +     +KG+QF  C+DP   
Sbjct: 509 TLLQLICDVLDVSKIEAGQLALELSEFSSLDLVHEIIQGYAAAAQAKGLQFYACVDPQLP 568

Query: 389 QLLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSIDSASSDGTFLEE 210
           ++     LLGD  R+RQ+L+N L+ A KFT   GR+ LR+    T S D           
Sbjct: 569 EI-----LLGDVTRIRQILSNLLNNAVKFTDT-GRIVLRV---RTESRD----------- 608

Query: 209 KETFIRQLGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
                                 G+ ++I   V DTG GI ++DQ ++FEP+
Sbjct: 609 ----------------------GERSNILWQVSDTGRGIAQDDQTLIFEPF 637


>tr|B2FQ27|B2FQ27_STRMK Putative two-component sensor histidine
           kinase response regulator fusion protein
           OS=Stenotrophomonas maltophilia (strain K279a)
           GN=Smlt0884 PE=3 SV=1
          Length = 923

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 58/170 (34%), Positives = 85/170 (50%)
 Frame = -2

Query: 566 MIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTKQ 387
           ++++++DVLD+ KIE+G+L LE   F+  E+  S++ +F  +   KG+Q  +C DP    
Sbjct: 497 LLQLISDVLDVSKIESGQLSLEPAAFSPRELTESVLRSFAASATCKGLQILVCTDPRLPT 556

Query: 386 LLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSIDSASSDGTFLEEK 207
                 +LGD  R+RQVL N LS A KFT   GRV LR                      
Sbjct: 557 -----RVLGDADRIRQVLGNLLSNAIKFTEH-GRVMLR---------------------- 588

Query: 206 ETFIRQLGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
              +RQ           V+  G+ + +   V DTG+GI  E+QA LFEP+
Sbjct: 589 ---VRQ-----------VQREGESSVLAWQVTDTGVGIAAEEQARLFEPF 624


>tr|Q15YK2|Q15YK2_PSEA6 Sensor protein OS=Pseudoalteromonas
           atlantica (strain T6c / BAA-1087) GN=Patl_0507 PE=3 SV=1
          Length = 1045

 Score = 81.6 bits (200), Expect = 3e-14
 Identities = 52/171 (30%), Positives = 82/171 (47%)
 Frame = -2

Query: 569 SMIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTK 390
           +++ I+NDVLD+ KIEAGKL +   PF++ E++  ++     +   KG++F   I+P   
Sbjct: 479 NLMTIVNDVLDVSKIEAGKLQINSHPFSINELLEEMIGVMAKSAHLKGLEFVYDIEPLPL 538

Query: 389 QLLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSIDSASSDGTFLEE 210
           +      L+GD +R+RQ+L N L  A KFT  G                           
Sbjct: 539 K------LIGDSYRIRQILNNLLGNALKFTDTG--------------------------- 565

Query: 209 KETFIRQLGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
                  +GL+ SGK L       +  + + +EDTGIGI +ED+  LF  +
Sbjct: 566 ------HIGLAASGKVLE----HGIFELNIKIEDTGIGISREDKRKLFTAF 606


>tr|A1WZ03|A1WZ03_HALHL Sensor protein OS=Halorhodospira halophila
           (strain DSM 244 / SL1) GN=Hhal_2151 PE=4 SV=1
          Length = 963

 Score = 80.1 bits (196), Expect = 8e-14
 Identities = 39/99 (39%), Positives = 59/99 (59%)
 Frame = -2

Query: 566 MIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTKQ 387
           ++ I+ND+LD  +IE+G+L L+  PF++GE++  L   F +    K ++    I P   +
Sbjct: 440 LLGIINDILDFSRIESGQLELDTGPFDLGEVIDHLATLFSEAAREKEIELIYAIQPELPR 499

Query: 386 LLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRI 270
           +     L+GD  R+ QVL N LS A KFTPRGG V L +
Sbjct: 500 M-----LVGDSLRITQVLTNLLSNAIKFTPRGGTVELEV 533


>tr|B4AX79|B4AX79_9CHRO Multi-sensor hybrid histidine kinase
            OS=Cyanothece sp. PCC 7822 GN=Cyan7822DRAFT_0971 PE=4
            SV=1
          Length = 1426

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 55/171 (32%), Positives = 82/171 (47%)
 Frame = -2

Query: 569  SMIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTK 390
            +++ I+ND+LD  KIE+GKL LE+QPFN+ E + S +       A KG++ +   DP+T 
Sbjct: 828  ALLMIINDILDFSKIESGKLELEEQPFNLRESIESSLDLLAPKAAEKGLELAYIFDPNTP 887

Query: 389  QLLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSIDSASSDGTFLEE 210
            +      +LGD  R+RQ+L N +    KFT +G       V  N SS         + +E
Sbjct: 888  E-----TILGDVTRLRQILVNLIGNGIKFTEKGE------VVVNVSS---------YPQE 927

Query: 209  KETFIRQLGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
            K                   +T    +I   V DTGIGI  E +  LF+ +
Sbjct: 928  K------------------SSTAPTYTIEFAVTDTGIGIAPERKDKLFKAF 960


>tr|A0YY73|A0YY73_9CYAN Sensor protein OS=Lyngbya sp. PCC 8106
            GN=L8106_27691 PE=4 SV=1
          Length = 1727

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
 Frame = -2

Query: 569  SMIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTK 390
            +++ I+ND+LD  KIE+GKL LE QPF +   +   +       + KG++ +  +DP+T 
Sbjct: 1034 ALLTIINDILDFSKIESGKLELEHQPFKLRTCIEESLDLLSARASEKGLELAYIVDPNTP 1093

Query: 389  QLLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSI--DSASSDGTFL 216
            ++     ++GD  R+RQVL N LS A KFT +G      ++ + TSS+  DSA S  +  
Sbjct: 1094 EV-----MVGDVTRLRQVLVNLLSNAVKFTNQG-----EVIVSVTSSLIQDSAQSLISSE 1143

Query: 215  EEKETFIRQLGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
            E+ E+                  +  +  +   V+DTGIGI  +    LF+ +
Sbjct: 1144 EKNES--------------QPSISPPIYEVQFAVKDTGIGIPPDRMHRLFKAF 1182


>tr|A7Q0L9|A7Q0L9_VITVI Chromosome chr7 scaffold_42, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028102001
           PE=4 SV=1
          Length = 1047

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
 Frame = -2

Query: 566 MIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTKQ 387
           ++ ILN +LD  KIEAGK+ LE++ FN+ E++  +V  +      KGV   + +DP    
Sbjct: 434 LLGILNSILDTSKIEAGKMQLEEEEFNLEELLEDVVDLYHPVGMKKGV--DVVLDPHDGS 491

Query: 386 LLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSIDS--ASSDGTFLE 213
           +     + GD+ +++QVL N LS A KFT   G V++R      SS  S  ASS  + L 
Sbjct: 492 VAKFSRVKGDRMKLKQVLCNLLSNAVKFTSE-GHVSIRAWAKKPSSESSVLASSQKSMLN 550

Query: 212 EKETFIRQ-----LGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
              +F  +       L  S K   V+           V+DTG G+ KE Q  +FE Y
Sbjct: 551 RLWSFFCKNNEAFKDLEASNK---VQKNPNCMEFVFEVDDTGKGVPKEKQKSVFENY 604


>tr|A5BEQ3|A5BEQ3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_032223 PE=4 SV=1
          Length = 1143

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
 Frame = -2

Query: 566 MIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTKQ 387
           ++ ILN +LD  KIEAGK+ LE++ FN+ E++  +V  +      KGV   + +DP    
Sbjct: 483 LLGILNSILDTSKIEAGKMQLEEEEFNLEELLEDVVDLYHPVGMKKGV--DVVLDPHDGS 540

Query: 386 LLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSIDS--ASSDGTFLE 213
           +     + GD+ +++QVL N LS A KFT   G V++R      SS  S  ASS  + L 
Sbjct: 541 VAKFSRVKGDRMKLKQVLCNLLSNAVKFTSE-GHVSIRAWAKKPSSESSVLASSQKSMLN 599

Query: 212 EKETFIRQ-----LGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
              +F  +       L  S K   V+           V+DTG G+ KE Q  +FE Y
Sbjct: 600 RLWSFFCKNNEAFKDLEASNK---VQKNPNCMEFVFEVDDTGKGVPKEKQKSVFENY 653


>tr|B5E7Y7|B5E7Y7_GEOBB Multi-sensor hybrid histidine kinase
           OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 /
           DSM 16622) GN=Gbem_1505 PE=3 SV=1
          Length = 818

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 54/171 (31%), Positives = 78/171 (45%)
 Frame = -2

Query: 569 SMIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTK 390
           +++ I+N++LD  KIEAG++ LE  PF++ ++ +  V  F D  A KG+  S  I+P   
Sbjct: 233 ALLGIINNILDFSKIEAGRMELEMIPFDLHQLTADAVAMFADDAARKGIALSCRIEPGLP 292

Query: 389 QLLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRIVCTNTSSIDSASSDGTFLEE 210
            +       GD  R+RQV+ N L  A KFTP G  VT                       
Sbjct: 293 VMFQ-----GDPGRLRQVMVNLLGNAVKFTPEGA-VT----------------------- 323

Query: 209 KETFIRQLGLSKSGKCLSVKTTGKVASITVFVEDTGIGIRKEDQAILFEPY 57
                           LSV    + A + V VEDTGIGI +E Q  +F+ +
Sbjct: 324 ----------------LSVSLVRRPALVRVTVEDTGIGISREAQERIFDHF 358


>tr|B0MC32|B0MC32_9FIRM Sensor protein OS=Anaerostipes caccae DSM
           14662 GN=ANACAC_01123 PE=4 SV=1
          Length = 1116

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 35/99 (35%), Positives = 64/99 (64%)
 Frame = -2

Query: 566 MIRILNDVLDMGKIEAGKLHLEKQPFNMGEMVSSLVWAFKDTMASKGVQFSLCIDPSTKQ 387
           ++ ++ND+LDM KIE+GKL L K+PFN+ E+++  V   +    S+ ++  + +     +
Sbjct: 653 LLSLINDILDMSKIESGKLSLRKEPFNLAELITDTVELIRPQADSRRIRVKVRL-----R 707

Query: 386 LLSSYDLLGDQHRVRQVLANYLSKATKFTPRGGRVTLRI 270
            L + +++GD  R+RQV  N LS A K+TP GG++ +++
Sbjct: 708 SLKNENVIGDPLRIRQVCINILSNAVKYTPEGGKIDIQV 746