| BP915881 |
| Clone id |
YMU001_000079_A07 |
| Library |
YMU01 |
| Length |
498 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000079_A07. |
| Accession |
BP915881 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
TTGTTAAAAGCCAAGATGGTGCCCTCAACTATGAGACCACAAAGTTACAACACGGTGGAA
TCTAGTACAATGACTGGGTACAAAAGATAAAAAGTGAGGGCGAGTACAATGGCAAACCAC
AACATCATCTGAGAATGACCAGGACCTGATGTAATATGGCAGCACAGCTATGCAAATTTG
CACCGCATAACTCTCCAAACGGTTCCATGATAATTAACCATACAAGCAGACCCAATTATA
AATTGAGTAATGCGTGTTTCTGCAGATTATTGTTACTTTTGATAACCCTCCACACACAGA
GTAATTGCATTCAGTAGAAAAAAAAAGAACCCTTTTGAACTCCAATGATTTGTAAACGGA
TGCACGATGAGTACATTCATGGGTGTTTTGAGCTCTGATGAATGGAGTACAAGGATATTC
AAATTCAGCCAAGGCAAAATTGACAAAGCCACCCTCTCTCCCATTTATTTCATTCAAATA
AAGGTCTGACCAGACTCT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
O77695 |
| Definition |
sp|O77695|BGLR_CERAE Beta-glucuronidase (Fragment) OS=Cercopithecus aethiops |
| Align length |
39 |
| Score (bit) |
32.0 |
| E-value |
1.6 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B7CKN5 |
| Definition |
tr|B7CKN5|B7CKN5_BURPS Putative acyltransferase OS=Burkholderia pseudomallei 576 |
| Align length |
137 |
| Score (bit) |
38.1 |
| E-value |
0.23 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915881|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_A07.
(498 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B7CKN5|B7CKN5_BURPS Putative acyltransferase OS=Burkholderia ... 38 0.23
tr|O52375|O52375_9FIRM Endo-1,4-beta-xylanase OS=Caldicellulosir... 34 3.4
tr|Q72FR1|Q72FR1_DESVH Phosphoenolpyruvate synthase-related prot... 34 4.4
tr|A1VHB0|A1VHB0_DESVV Pyruvate, water dikinase OS=Desulfovibrio... 34 4.4
tr|A8RXQ9|A8RXQ9_9CLOT Putative uncharacterized protein OS=Clost... 34 4.4
tr|B8E1P4|B8E1P4_9BACT Endo-1,4-beta-xylanase OS=Dictyoglomus tu... 34 4.4
tr|Q4G3Z5|Q4G3Z5_MACMU Glucuronidase beta (Fragment) OS=Macaca m... 33 5.7
tr|B6Y5N6|B6Y5N6_ANATH Endo-1,4-beta-xylanase OS=Anaerocellum th... 33 9.8
>tr|B7CKN5|B7CKN5_BURPS Putative acyltransferase OS=Burkholderia
pseudomallei 576 GN=BUC_3397 PE=4 SV=1
Length = 370
Score = 38.1 bits (87), Expect = 0.23
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 19/137 (13%)
Frame = -2
Query: 422 LNILVLHSSELKTPMNVLI--VHPFTNHWSSKGFFFFLLNAITLCVEGYQK*Q*SAETRI 249
L +L+ H S + TPM V + PFT S FF+++A TLC+ + Q T +
Sbjct: 18 LYVLLFHFSLITTPMAVAPRWLAPFTGLGGSGVTLFFIVSAFTLCLSTDARKQ-DEPTPL 76
Query: 248 TQFIIGSACMVNYHGTVWRVMRC---KFA*LCCH------------ITSGPGHSQMMLW- 117
+ + + VW V+ C K H + PGH Q +W
Sbjct: 77 LNYYLRRVFRIAPLFYVWIVLYCIRDKLVFDVVHSPAEIARSLFFMLNLSPGHEQGFVWA 136
Query: 116 -FAIVLALTFYLLYPVI 69
+ I + + FY+ +P I
Sbjct: 137 SWTIGVEMLFYVFFPAI 153
>tr|O52375|O52375_9FIRM Endo-1,4-beta-xylanase
OS=Caldicellulosiruptor sp. Rt69B.1 GN=xynD PE=3 SV=1
Length = 361
Score = 34.3 bits (77), Expect = 3.4
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -2
Query: 344 WSSKGFFFFLLNAITLCVEGYQK*Q*SAETRITQ--FIIGSACMVNYHGT 201
W++KG ++ ITLCVEGYQ S ITQ F IG + + +G+
Sbjct: 177 WAAKGLNLGTIDQITLCVEGYQS---SGSANITQNTFTIGGSSSGSSNGS 223
>tr|Q72FR1|Q72FR1_DESVH Phosphoenolpyruvate synthase-related protein
OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB 8303) GN=DVU_0152 PE=4 SV=1
Length = 853
Score = 33.9 bits (76), Expect = 4.4
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -1
Query: 180 QICIAVLPYYIRSWSFSDDVVVCHCTRPHFLSFVPSHCTRFHRVVTL 40
Q+C+ P +I +D ++ H P +F+P CT H V+ L
Sbjct: 572 QVCLGDTPVHIALRRVADHILPLHLVDPKAATFIPRSCTTLHDVMRL 618
>tr|A1VHB0|A1VHB0_DESVV Pyruvate, water dikinase OS=Desulfovibrio
vulgaris subsp. vulgaris (strain DP4) GN=Dvul_2815 PE=4
SV=1
Length = 853
Score = 33.9 bits (76), Expect = 4.4
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -1
Query: 180 QICIAVLPYYIRSWSFSDDVVVCHCTRPHFLSFVPSHCTRFHRVVTL 40
Q+C+ P +I +D ++ H P +F+P CT H V+ L
Sbjct: 572 QVCLGDTPVHIALRRVADHILPLHLVDPKAATFIPRSCTTLHDVMRL 618
>tr|A8RXQ9|A8RXQ9_9CLOT Putative uncharacterized protein
OS=Clostridium bolteae ATCC BAA-613 GN=CLOBOL_04923 PE=4
SV=1
Length = 280
Score = 33.9 bits (76), Expect = 4.4
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -1
Query: 225 LYG*LSWNRLESYAVQICIAVLPYYIRSWSFSDDVVVCHCTRPHFLSFVPS 73
L G + W + + + I + +L Y + S SF +VC C + F++F+PS
Sbjct: 48 LPGGIDWTGIIFWMLNIPLFLLSYVLISHSFFYKTIVCVCLQSLFIAFIPS 98
>tr|B8E1P4|B8E1P4_9BACT Endo-1,4-beta-xylanase OS=Dictyoglomus
turgidum DSM 6724 GN=Dtur_0243 PE=3 SV=1
Length = 356
Score = 33.9 bits (76), Expect = 4.4
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = -2
Query: 344 WSSKGFFFFLLNAITLCVEGYQK*Q*SAETRITQFIIGSACMVNYHGTVWRV 189
W++KG ++ ITLCVEGYQ S ITQ ++ TV RV
Sbjct: 193 WANKGLNLGTIDQITLCVEGYQS---SGSANITQNTFSTSSSSGGSTTVTRV 241
>tr|Q4G3Z5|Q4G3Z5_MACMU Glucuronidase beta (Fragment) OS=Macaca
mulatta GN=GUSB PE=2 SV=1
Length = 144
Score = 33.5 bits (75), Expect = 5.7
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 351 KSLEFKRVLFFSTECNYSVCGGLSKVTIICRNTHYSIYN 235
K+L+ R + F T NY+ G V +IC N++YS YN
Sbjct: 55 KALDPSRPVAFVTRSNYAADKGAPYVDVICVNSYYSWYN 93
>tr|B6Y5N6|B6Y5N6_ANATH Endo-1,4-beta-xylanase OS=Anaerocellum
thermophilum DSM 6725 GN=AtheDRAFT_2789 PE=3 SV=1
Length = 357
Score = 32.7 bits (73), Expect = 9.8
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 344 WSSKGFFFFLLNAITLCVEGYQK*Q*SAETRITQ--FIIGSA 225
W++KG ++ ITLCVEGYQ S ITQ F I SA
Sbjct: 191 WAAKGLNLGTIDQITLCVEGYQS---SGSANITQNTFSITSA 229
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