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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915883
Clone id YMU001_000079_A10
Library
Length 282
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000079_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTACAGCGTCAAGAACAACTTCTCACCCGTCATGATGGCCGTTCTCGCAGGCGAGAAAAT
GTTCCTGGTGAATTCTTCGTTGATCACACTTGCATTGATTGTGATACTTGCAGATGGATG
GCTCCTGACACTTTTAATAGACAAGGGCATCAATCTGCAGTTTATTGCCAGCCTACTTCT
CCAAGTGCCCGGGTTGCAGCTTTGCAGGCCCTATTGTCATGCCCAACATCATCCATTCGA
ACAGAAAAGGCACCGACTGACATTCTGAGCATTCATACAACT
■■Homology search results ■■ -
sp_hit_id P46797
Definition sp|P46797|FER_THEMA Ferredoxin OS=Thermotoga maritima
Align length 55
Score (bit) 31.6
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915883|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_A10.
         (282 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P46797|FER_THEMA Ferredoxin OS=Thermotoga maritima GN=fdx PE=...    32   1.3  
sp|Q90ZS6|TRPS1_XENLA Zinc finger transcription factor Trps1 OS=...    31   1.7  
sp|Q9UHF7|TRPS1_HUMAN Zinc finger transcription factor Trps1 OS=...    31   1.7  
sp|P00210|FER1_DESAF Ferredoxin-1 OS=Desulfovibrio africanus GN=...    31   1.7  
sp|Q925H1|TRPS1_MOUSE Zinc finger transcription factor Trps1 OS=...    31   2.2  
sp|P07485|FER1_DESNO Ferredoxin-1 OS=Desulfomicrobium norvegicum...    31   2.2  
sp|P49673|KAPC_ASCSU cAMP-dependent protein kinase catalytic sub...    29   6.3  
sp|P37485|YYBS_BACSU Uncharacterized protein yybS OS=Bacillus su...    29   6.4  
sp|P29604|FER_THELI Ferredoxin OS=Thermococcus litoralis PE=1 SV=1     29   8.3  
sp|Q6XR72|ZNT10_HUMAN Zinc transporter 10 OS=Homo sapiens GN=SLC...    29   8.3  
sp|Q1EAK2|SRB8_COCIM Mediator of RNA polymerase II transcription...    29   8.3  
sp|Q9BRB3|PIGQ_HUMAN Phosphatidylinositol N-acetylglucosaminyltr...    29   8.3  

>sp|P46797|FER_THEMA Ferredoxin OS=Thermotoga maritima GN=fdx PE=1
           SV=1
          Length = 60

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 91  CIDCDTCRWMAPDTFNRQGHQSAVYCQPTS--PSARVAALQALLSCPTSSIRTEK 249
           CI C  C  + PD F       A   QP +  P A+ AA     SCPT +I  E+
Sbjct: 10  CIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPCAKDAA----DSCPTGAISVEE 60


>sp|Q90ZS6|TRPS1_XENLA Zinc finger transcription factor Trps1
           OS=Xenopus laevis GN=trps1 PE=1 SV=1
          Length = 1271

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +1

Query: 10  QEQLLTRHDGRSRRRENVPGEFFVDHTCIDCDTCRWMAPDTFNRQGHQSAVYCQ 171
           +E   T+ D   +  E++P  +   H C  C  C + A DT +   H ++ +CQ
Sbjct: 654 KEHSCTKCDFIVQVEEDLPRHYRRVHNCYKCRQCNFTAADTQSLLDHFNSAHCQ 707


>sp|Q9UHF7|TRPS1_HUMAN Zinc finger transcription factor Trps1
           OS=Homo sapiens GN=TRPS1 PE=1 SV=2
          Length = 1281

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +1

Query: 4   QRQEQLLTRHDGRSRRRENVPGEFFVDHTCIDCDTCRWMAPDTFNRQGHQSAVYCQ 171
           + +E   T+ D  ++  E +   +   H+C  C  C + A DT +   H + V+CQ
Sbjct: 662 ESKEHSCTKCDFITQVEEEISRHYRRAHSCYKCRQCSFTAADTQSLLEHFNTVHCQ 717


>sp|P00210|FER1_DESAF Ferredoxin-1 OS=Desulfovibrio africanus GN=fd1
           PE=1 SV=3
          Length = 65

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 70  EFFVDHT-CIDCDTCRWMAPDTFNRQGHQSAVYCQPTSPSARVAALQALLSCPTSSIRTE 246
           +F+VD   CI C++C  +AP  F         Y +    +++    +A+ +CP   I  E
Sbjct: 4   KFYVDQDECIACESCVEIAPGAFAMDPEIEKAYVKDVEGASQEEVEEAMDTCPVQCIHWE 63


>sp|Q925H1|TRPS1_MOUSE Zinc finger transcription factor Trps1 OS=Mus
           musculus GN=Trps1 PE=1 SV=1
          Length = 1281

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +1

Query: 10  QEQLLTRHDGRSRRRENVPGEFFVDHTCIDCDTCRWMAPDTFNRQGHQSAVYCQ 171
           +E   T+ D  ++  E +   +   H+C  C  C + A DT +   H + V+CQ
Sbjct: 664 KEHSCTKCDFITQVEEEISRHYRRAHSCYKCRQCSFTAADTQSLLEHFNTVHCQ 717


>sp|P07485|FER1_DESNO Ferredoxin-1 OS=Desulfomicrobium norvegicum
           (strain DSM 1741 / NCIMB 8310) (strain Norway 4) PE=1
           SV=1
          Length = 59

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 79  VDHT-CIDCDTCRWMAPDTFNR-QGHQSAVYCQPTSPSARVAALQALLSCPTSSIRTE 246
           +DH  CI C++C  + P+ F    G + A+   P S +    A  A+ +CP  +I  E
Sbjct: 4   IDHEECIGCESCVELCPEVFAMIDGEEKAMVTAPDSTAE--CAQDAIDACPVEAISKE 59


>sp|P49673|KAPC_ASCSU cAMP-dependent protein kinase catalytic
           subunit OS=Ascaris suum GN=CAPK PE=2 SV=1
          Length = 337

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 7   RQEQLLTRHDGRSRRRENVPGEFFVDHTCIDCDTCRWMAPDTFNRQGHQSAV 162
           + E L+   +G  +  +    +  +D T   C T  ++AP+    +GH +AV
Sbjct: 154 KPENLMLNKEGHLKMTDFGFAKEVIDRTWTMCGTPEYLAPEVIGNKGHDTAV 205


>sp|P37485|YYBS_BACSU Uncharacterized protein yybS OS=Bacillus
           subtilis GN=yybS PE=4 SV=1
          Length = 309

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
 Frame = +2

Query: 77  SLITLALIVILADGWLLTLLIDKG-------INLQFIASLLLQVPGLQLCRPYCHAQHHP 235
           S++ L LI+++    L  L ++KG       +N +FI   L+ + GL     YCH + +P
Sbjct: 216 SVVVLYLIIVM----LSFLPLEKGQMLYSIALNGEFILGFLIFIQGLSFIFFYCHKKQYP 271


>sp|P29604|FER_THELI Ferredoxin OS=Thermococcus litoralis PE=1 SV=1
          Length = 59

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = +1

Query: 91  CIDCDTCRWMAPDTF--NRQGHQSAVYCQPTSPSARVAALQALLSCPTSSIRTE 246
           CI C  C  + PD F  +  G   A+  +     A+ AA     SCPT +I  E
Sbjct: 10  CIGCGVCASICPDVFEMDDDGKAKALVAETDLECAKEAA----ESCPTGAITVE 59


>sp|Q6XR72|ZNT10_HUMAN Zinc transporter 10 OS=Homo sapiens
           GN=SLC30A10 PE=2 SV=1
          Length = 496

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
 Frame = +2

Query: 68  VNSSLITLALIVILADGW--------LLTLLIDKGINLQFIASLLLQVPGL 196
           ++ SL  L +I+IL+  +        +L  ++ KG+N++ + S L  VPG+
Sbjct: 279 IDPSLTVLMVIIILSSAFPLIKETAAILLQMVPKGVNMEELMSKLSAVPGI 329
tr_hit_id A9RJ08
Definition tr|A9RJ08|A9RJ08_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 88
Score (bit) 119.0
E-value 8.0e-26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915883|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_A10.
         (282 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RJ08|A9RJ08_PHYPA Predicted protein OS=Physcomitrella paten...   119   8e-26
tr|A9P038|A9P038_PICSI Putative uncharacterized protein OS=Picea...   112   9e-24
tr|B1XPF9|B1XPF9_SYNP2 Metallo-beta-lactamase superfamily hydrol...   112   1e-23
tr|B6UI84|B6UI84_MAIZE Zn-dependent hydrolases, including glyoxy...   107   4e-22
tr|Q8RWE1|Q8RWE1_ARATH Putative uncharacterized protein At4g3354...   105   1e-21
tr|B8ACT9|B8ACT9_ORYSI Putative uncharacterized protein OS=Oryza...   105   1e-21
tr|A8JGC5|A8JGC5_CHLRE Predicted protein OS=Chlamydomonas reinha...   104   2e-21
tr|B4W2Z6|B4W2Z6_9CYAN Metallo-beta-lactamase superfamily protei...   103   3e-21
tr|Q7NDS4|Q7NDS4_GLOVI Glr4158 protein OS=Gloeobacter violaceus ...   103   4e-21
tr|B0CDW4|B0CDW4_ACAM1 Metallo-beta-lactamase superfamily protei...   103   6e-21
tr|B2J6Q1|B2J6Q1_NOSP7 Beta-lactamase domain protein OS=Nostoc p...   102   7e-21
tr|A0YY75|A0YY75_9CYAN Putative uncharacterized protein OS=Lyngb...   102   7e-21
tr|Q10VZ8|Q10VZ8_TRIEI Putative uncharacterized protein OS=Trich...   102   1e-20
tr|Q8YXI5|Q8YXI5_ANASP All1228 protein OS=Anabaena sp. (strain P...   102   1e-20
tr|Q3MFG6|Q3MFG6_ANAVT Beta-lactamase-like OS=Anabaena variabili...   102   1e-20
tr|B8HJM6|B8HJM6_9CHRO Beta-lactamase domain protein OS=Cyanothe...   102   1e-20
tr|B4WN84|B4WN84_9SYNE Metallo-beta-lactamase superfamily protei...   102   1e-20
tr|Q6K9T9|Q6K9T9_ORYSJ Os02g0829500 protein OS=Oryza sativa subs...   102   1e-20
tr|A3ACZ1|A3ACZ1_ORYSJ cDNA clone:J013045A06, full insert sequen...   102   1e-20
tr|B7JZY6|B7JZY6_SYNP8 Beta-lactamase domain protein OS=Synechoc...   101   2e-20
tr|B4C4X1|B4C4X1_9CHRO Beta-lactamase domain protein OS=Cyanothe...   101   2e-20
tr|B4AUQ0|B4AUQ0_9CHRO Beta-lactamase domain protein OS=Cyanothe...   100   5e-20
tr|B8LLU2|B8LLU2_PICSI Putative uncharacterized protein OS=Picea...    97   3e-19
tr|A9P172|A9P172_PICSI Putative uncharacterized protein OS=Picea...    97   3e-19
tr|A9NM33|A9NM33_PICSI Putative uncharacterized protein OS=Picea...    97   3e-19
tr|B7KCM5|B7KCM5_9CHRO Beta-lactamase domain protein OS=Cyanothe...    96   7e-19
tr|O81871|O81871_ARATH Putative uncharacterized protein T16L1.30...    96   7e-19
tr|B3QVX8|B3QVX8_CHLT3 Beta-lactamase domain protein OS=Chlorohe...    95   2e-18
tr|B1WQE9|B1WQE9_CYAA5 Putative uncharacterized protein OS=Cyano...    94   4e-18
tr|A3IKT6|A3IKT6_9CHRO Putative uncharacterized protein OS=Cyano...    93   6e-18

>tr|A9RJ08|A9RJ08_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175342 PE=4 SV=1
          Length = 357

 Score =  119 bits (298), Expect = 8e-26
 Identities = 56/88 (63%), Positives = 62/88 (70%)
 Frame = +1

Query: 13  EQLLTRHDGRSRRRENVPGEFFVDHTCIDCDTCRWMAPDTFNRQGHQSAVYCQPTSPSAR 192
           +Q   +   R+RR ENV GEF+VDHTCIDCDTCRWMAP  F     QSAVY QP SP  R
Sbjct: 49  QQSAKKESKRARRPENVEGEFYVDHTCIDCDTCRWMAPTVFKHSNPQSAVYHQPESPEER 108

Query: 193 VAALQALLSCPTSSIRTEKAPTDILSIH 276
           + ALQALLSCPTSSI TE+ P DI   H
Sbjct: 109 LKALQALLSCPTSSIHTERPPKDIKQAH 136


>tr|A9P038|A9P038_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 352

 Score =  112 bits (280), Expect = 9e-24
 Identities = 50/81 (61%), Positives = 62/81 (76%)
 Frame = +1

Query: 40  RSRRRENVPGEFFVDHTCIDCDTCRWMAPDTFNRQGHQSAVYCQPTSPSARVAALQALLS 219
           + +R +NV G+F+V+H CIDCD CRWMAP+TF R   QSAVY QP +   R AALQALLS
Sbjct: 61  KHKRPQNVEGDFYVNHKCIDCDVCRWMAPETFGRVDGQSAVYKQPYTAEERTAALQALLS 120

Query: 220 CPTSSIRTEKAPTDILSIHTT 282
           CP  SIRTE+ P+DIL +H+T
Sbjct: 121 CPVGSIRTEQPPSDILQVHST 141


>tr|B1XPF9|B1XPF9_SYNP2 Metallo-beta-lactamase superfamily hydrolase
           OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
           PR-6) GN=SYNPCC7002_A0509 PE=4 SV=1
          Length = 291

 Score =  112 bits (279), Expect = 1e-23
 Identities = 52/85 (61%), Positives = 66/85 (77%)
 Frame = +1

Query: 19  LLTRHDGRSRRRENVPGEFFVDHTCIDCDTCRWMAPDTFNRQGHQSAVYCQPTSPSARVA 198
           + T+H    RR +NVPG+F+VD +CIDCDTCRW++P+ FNRQ  QSAVY QP +P  R A
Sbjct: 1   MATQHQ---RRSQNVPGDFYVDSSCIDCDTCRWLSPEIFNRQDGQSAVYHQPQTPDQRRA 57

Query: 199 ALQALLSCPTSSIRTEKAPTDILSI 273
           ALQALL+CPT+SI TE AP D+ +I
Sbjct: 58  ALQALLACPTASIATETAPKDLPTI 82


>tr|B6UI84|B6UI84_MAIZE Zn-dependent hydrolases, including
           glyoxylases OS=Zea mays PE=2 SV=1
          Length = 328

 Score =  107 bits (266), Expect = 4e-22
 Identities = 50/78 (64%), Positives = 56/78 (71%)
 Frame = +1

Query: 40  RSRRRENVPGEFFVDHTCIDCDTCRWMAPDTFNRQGHQSAVYCQPTSPSARVAALQALLS 219
           R RR  NV G+FFVDH CIDC TCRWMAP+ F R   ++AV  QP+S   R  ALQALLS
Sbjct: 38  RRRRPHNVAGDFFVDHRCIDCQTCRWMAPEVFKRVDGKAAVAAQPSSEEERTKALQALLS 97

Query: 220 CPTSSIRTEKAPTDILSI 273
           CPTSSI TEK P DIL +
Sbjct: 98  CPTSSIHTEKPPKDILKV 115


>tr|Q8RWE1|Q8RWE1_ARATH Putative uncharacterized protein At4g33540
           OS=Arabidopsis thaliana GN=At4g33540 PE=2 SV=1
          Length = 355

 Score =  105 bits (262), Expect = 1e-21
 Identities = 49/81 (60%), Positives = 57/81 (70%)
 Frame = +1

Query: 22  LTRHDGRSRRRENVPGEFFVDHTCIDCDTCRWMAPDTFNRQGHQSAVYCQPTSPSARVAA 201
           +T H+   RR +NV G+ FVD+TCIDCDTCRWM PD F R  + SAV  QPT    R+ A
Sbjct: 49  VTSHENPRRRTQNVEGDIFVDNTCIDCDTCRWMVPDLFTRVDNMSAVTKQPTCKEERLNA 108

Query: 202 LQALLSCPTSSIRTEKAPTDI 264
           LQALLSCPT SIRT+  P DI
Sbjct: 109 LQALLSCPTGSIRTQTPPADI 129


>tr|B8ACT9|B8ACT9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00069 PE=4 SV=1
          Length = 326

 Score =  105 bits (261), Expect = 1e-21
 Identities = 49/76 (64%), Positives = 55/76 (72%)
 Frame = +1

Query: 46  RRRENVPGEFFVDHTCIDCDTCRWMAPDTFNRQGHQSAVYCQPTSPSARVAALQALLSCP 225
           RR +NVPG+FFVDH CIDC TCRWMAP+ F R   ++AV  QP S   R  ALQALLSCP
Sbjct: 38  RRPQNVPGDFFVDHRCIDCQTCRWMAPEVFKRVDGKAAVAAQPISDEHRTKALQALLSCP 97

Query: 226 TSSIRTEKAPTDILSI 273
           TSSI TEK   DIL +
Sbjct: 98  TSSIHTEKPAKDILQV 113


>tr|A8JGC5|A8JGC5_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_108123 PE=4 SV=1
          Length = 72

 Score =  104 bits (260), Expect = 2e-21
 Identities = 49/67 (73%), Positives = 51/67 (76%)
 Frame = +1

Query: 28  RHDGRSRRRENVPGEFFVDHTCIDCDTCRWMAPDTFNRQGHQSAVYCQPTSPSARVAALQ 207
           RH+ R  R ENV G FFVD TCIDCDTCRWMAP+TF R G QSAV  QPT   ARV ALQ
Sbjct: 6   RHNEREARPENVAGSFFVDRTCIDCDTCRWMAPETFGRVGRQSAVVSQPTGHEARVRALQ 65

Query: 208 ALLSCPT 228
           ALLSCPT
Sbjct: 66  ALLSCPT 72


>tr|B4W2Z6|B4W2Z6_9CYAN Metallo-beta-lactamase superfamily protein
           OS=Microcoleus chthonoplastes PCC 7420 GN=MC7420_38 PE=4
           SV=1
          Length = 291

 Score =  103 bits (258), Expect = 3e-21
 Identities = 48/79 (60%), Positives = 59/79 (74%)
 Frame = +1

Query: 46  RRRENVPGEFFVDHTCIDCDTCRWMAPDTFNRQGHQSAVYCQPTSPSARVAALQALLSCP 225
           RR +NV G+ +VD TCIDCDTCRWMAP+ F+R   QSAVY QPT+ + R+AA+QALLSCP
Sbjct: 7   RRPQNVKGDVYVDETCIDCDTCRWMAPNVFHRADAQSAVYHQPTNEAERLAAMQALLSCP 66

Query: 226 TSSIRTEKAPTDILSIHTT 282
           T+SI T   P DI  +  T
Sbjct: 67  TASIGTVDKPKDIKDVQET 85


>tr|Q7NDS4|Q7NDS4_GLOVI Glr4158 protein OS=Gloeobacter violaceus
           GN=glr4158 PE=4 SV=1
          Length = 297

 Score =  103 bits (257), Expect = 4e-21
 Identities = 48/73 (65%), Positives = 55/73 (75%)
 Frame = +1

Query: 46  RRRENVPGEFFVDHTCIDCDTCRWMAPDTFNRQGHQSAVYCQPTSPSARVAALQALLSCP 225
           RR+EN  GEF+VD TCIDCDTCRW+AP+TF   G QSAVY QPT+ S R  AL ALL+CP
Sbjct: 7   RRKENAEGEFYVDSTCIDCDTCRWVAPETFREAGAQSAVYHQPTNESERRRALHALLACP 66

Query: 226 TSSIRTEKAPTDI 264
           T+SI T   P DI
Sbjct: 67  TASIGTVHKPADI 79


>tr|B0CDW4|B0CDW4_ACAM1 Metallo-beta-lactamase superfamily protein
           OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_4337
           PE=4 SV=1
          Length = 290

 Score =  103 bits (256), Expect = 6e-21
 Identities = 46/78 (58%), Positives = 58/78 (74%)
 Frame = +1

Query: 40  RSRRRENVPGEFFVDHTCIDCDTCRWMAPDTFNRQGHQSAVYCQPTSPSARVAALQALLS 219
           + RR +NV G+ +VD TCIDCDTCRWMAP+ F+R G QSAV+ QPT    R+ ALQALL+
Sbjct: 5   QKRRSQNVTGDLYVDSTCIDCDTCRWMAPNIFHRDGSQSAVFVQPTQEKERLHALQALLA 64

Query: 220 CPTSSIRTEKAPTDILSI 273
           CPT+SI T   PT+I  +
Sbjct: 65  CPTASIGTVNKPTEIQQV 82