BP915887 |
Clone id |
YMU001_000079_B02 |
Library |
YMU01 |
Length |
523 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000079_B02. |
Accession |
BP915887 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTGTTCGTGTATGTCACGCCCACTTGGAAGACTATACAGAGAGAGACATTTGCTGTTGAG TAAGATACTACTGAATCATATGAAAGCTCACTCTTTGACAAAACTCAAACCTTTCTCTAT CAATATTCACTAAACCAAGTACTTAACCATGTGGGGGCCTTCCAATTCATAATCTAGTTT TCTGTAGTAATATCTAGTGCCAACACCAGAAATCACGGCCAGCCTTGTAAACCTATGCTC ACTAATAGCAATTCTCTCCGCCTCTTCCATGAGAAGGGTGCCATAACCCTGGTGCTGCAG TTTTTCTGCATCTCGGCCATGCACAGGAACAGCAGTTCCATAAACGTGCAACTCACGCAC GATTGAACATCGTCCTTTCAACTCAGAGCAAGTCACATTTTGCCCACATTTACGCAAACG AAGCAAACCTACCAAAATATCCTGTTGTGTATCCTCATAAGACAAAAAAGTTTCCTAACC TTCGTTAGCAACATAGTCCCGTCGTATAAGTTCCACTTCTTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7X7L3 |
Definition |
sp|Q7X7L3|ELP3_ORYSJ Elongator complex protein 3 OS=Oryza sativa subsp. japonica |
Align length |
130 |
Score (bit) |
228.0 |
E-value |
1.0e-59 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0JC95 |
Definition |
tr|Q0JC95|Q0JC95_ORYSJ Os04g0484900 protein OS=Oryza sativa subsp. japonica |
Align length |
130 |
Score (bit) |
228.0 |
E-value |
1.0e-58 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915887|Adiantum capillus-veneris mRNA, clone: YMU001_000079_B02. (523 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q0JC95|Q0JC95_ORYSJ Os04g0484900 protein OS=Oryza sativa subs... 228 1e-58 tr|Q01IF8|Q01IF8_ORYSA H0805A05.12 protein OS=Oryza sativa GN=H0... 228 1e-58 tr|A3AV03|A3AV03_ORYSJ Putative uncharacterized protein OS=Oryza... 228 1e-58 tr|A2XUT6|A2XUT6_ORYSI Putative uncharacterized protein OS=Oryza... 228 1e-58 tr|A9T8U2|A9T8U2_PHYPA RNA polymerase II elongator complex, subu... 227 2e-58 tr|A7QZ22|A7QZ22_VITVI Chromosome chr17 scaffold_263, whole geno... 226 4e-58 tr|B4FJY4|B4FJY4_MAIZE Putative uncharacterized protein OS=Zea m... 224 2e-57 tr|Q0Z9V9|Q0Z9V9_WHEAT Histone acetyltransferase HAT2 OS=Triticu... 223 5e-57 tr|B4KER3|B4KER3_DROMO GI22150 OS=Drosophila mojavensis GN=GI221... 189 7e-47 tr|B6MKG1|B6MKG1_BRAFL Putative uncharacterized protein OS=Branc... 186 6e-46 tr|Q22HD8|Q22HD8_TETTH Histone acetyltransferase, ELP3 family pr... 186 8e-46 tr|B4QA75|B4QA75_DROSI GD23288 OS=Drosophila simulans GN=GD23288... 186 8e-46 tr|B4I392|B4I392_DROSE GM18474 OS=Drosophila sechellia GN=GM1847... 186 8e-46 tr|B4NYK5|B4NYK5_DROYA GE18291 OS=Drosophila yakuba GN=GE18291 P... 185 1e-45 tr|A7SA82|A7SA82_NEMVE Predicted protein OS=Nematostella vectens... 184 2e-45 tr|B3N3S3|B3N3S3_DROER GG25004 OS=Drosophila erecta GN=GG25004 P... 184 3e-45 tr|B4LT68|B4LT68_DROVI GJ20018 OS=Drosophila virilis GN=GJ20018 ... 183 4e-45 tr|B4GPU7|B4GPU7_DROPE GL15175 OS=Drosophila persimilis GN=GL151... 183 4e-45 tr|A8PTD7|A8PTD7_BRUMA RE35395p, putative OS=Brugia malayi GN=Bm... 182 7e-45 tr|A9V8X8|A9V8X8_MONBE Predicted protein OS=Monosiga brevicollis... 182 9e-45 tr|A8NEF4|A8NEF4_COPC7 Putative uncharacterized protein OS=Copri... 182 9e-45 tr|Q29LJ9|Q29LJ9_DROPS GA13723 OS=Drosophila pseudoobscura pseud... 182 1e-44 tr|B7PTM1|B7PTM1_IXOSC Putative uncharacterized protein (Fragmen... 181 2e-44 tr|Q4RF44|Q4RF44_TETNG Chromosome 14 SCAF15120, whole genome sho... 181 2e-44 tr|A4S727|A4S727_OSTLU Predicted protein OS=Ostreococcus lucimar... 181 2e-44 tr|B4JCL5|B4JCL5_DROGR GH10129 OS=Drosophila grimshawi GN=GH1012... 180 3e-44 tr|Q0IF73|Q0IF73_AEDAE Elongator component, putative OS=Aedes ae... 180 4e-44 tr|Q00VG8|Q00VG8_OSTTA OJ000223_09.4 [Oryza sativa (ISS) OS=Ostr... 179 6e-44 tr|B8P9E3|B8P9E3_9APHY Predicted protein OS=Postia placenta Mad-... 179 7e-44 tr|B0DQ08|B0DQ08_LACBS Histone acetyltransferase, GCN5 superfami... 179 7e-44
>tr|Q0JC95|Q0JC95_ORYSJ Os04g0484900 protein OS=Oryza sativa subsp. japonica GN=Os04g0484900 PE=2 SV=1 Length = 573
Score = 228 bits (581), Expect = 1e-58 Identities = 111/130 (85%), Positives = 120/130 (92%) Frame = -2
Query: 522 EEVELIRRDYVANEG*ETFLSYEDTQQDILVGLLRLRKCGQNVTCSELKGRCSIVRELHV 343 +EVEL+RRDY ANEG ETFLSYEDTQQDIL+GLLRLRKCG+NVTC EL GRCSIVRELHV Sbjct: 444 DEVELVRRDYAANEGWETFLSYEDTQQDILIGLLRLRKCGRNVTCPELVGRCSIVRELHV 503
Query: 342 YGTAVPVHGRDAEKLQHQGYGTLLMEEAERIAISEHRFTRLAVISGVGTRYYYRKLDYEL 163 YGTAVPVHGRDA+KLQHQGYGTLLMEEAERIA EHR ++AVISGVGTR+YYRKL YEL Sbjct: 504 YGTAVPVHGRDADKLQHQGYGTLLMEEAERIARKEHRSKKIAVISGVGTRHYYRKLGYEL 563
Query: 162 EGPHMVKYLV 133 EGP+MVK LV Sbjct: 564 EGPYMVKCLV 573
>tr|Q01IF8|Q01IF8_ORYSA H0805A05.12 protein OS=Oryza sativa GN=H0805A05.12 PE=4 SV=1 Length = 573
Score = 228 bits (581), Expect = 1e-58 Identities = 111/130 (85%), Positives = 120/130 (92%) Frame = -2
Query: 522 EEVELIRRDYVANEG*ETFLSYEDTQQDILVGLLRLRKCGQNVTCSELKGRCSIVRELHV 343 +EVEL+RRDY ANEG ETFLSYEDTQQDIL+GLLRLRKCG+NVTC EL GRCSIVRELHV Sbjct: 444 DEVELVRRDYAANEGWETFLSYEDTQQDILIGLLRLRKCGRNVTCPELVGRCSIVRELHV 503
Query: 342 YGTAVPVHGRDAEKLQHQGYGTLLMEEAERIAISEHRFTRLAVISGVGTRYYYRKLDYEL 163 YGTAVPVHGRDA+KLQHQGYGTLLMEEAERIA EHR ++AVISGVGTR+YYRKL YEL Sbjct: 504 YGTAVPVHGRDADKLQHQGYGTLLMEEAERIARKEHRSKKIAVISGVGTRHYYRKLGYEL 563
Query: 162 EGPHMVKYLV 133 EGP+MVK LV Sbjct: 564 EGPYMVKCLV 573
>tr|A3AV03|A3AV03_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_014625 PE=4 SV=1 Length = 568
Score = 228 bits (581), Expect = 1e-58 Identities = 111/130 (85%), Positives = 120/130 (92%) Frame = -2
Query: 522 EEVELIRRDYVANEG*ETFLSYEDTQQDILVGLLRLRKCGQNVTCSELKGRCSIVRELHV 343 +EVEL+RRDY ANEG ETFLSYEDTQQDIL+GLLRLRKCG+NVTC EL GRCSIVRELHV Sbjct: 439 DEVELVRRDYAANEGWETFLSYEDTQQDILIGLLRLRKCGRNVTCPELVGRCSIVRELHV 498
Query: 342 YGTAVPVHGRDAEKLQHQGYGTLLMEEAERIAISEHRFTRLAVISGVGTRYYYRKLDYEL 163 YGTAVPVHGRDA+KLQHQGYGTLLMEEAERIA EHR ++AVISGVGTR+YYRKL YEL Sbjct: 499 YGTAVPVHGRDADKLQHQGYGTLLMEEAERIARKEHRSKKIAVISGVGTRHYYRKLGYEL 558
Query: 162 EGPHMVKYLV 133 EGP+MVK LV Sbjct: 559 EGPYMVKCLV 568
>tr|A2XUT6|A2XUT6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16373 PE=4 SV=1 Length = 573
Score = 228 bits (581), Expect = 1e-58 Identities = 111/130 (85%), Positives = 120/130 (92%) Frame = -2
Query: 522 EEVELIRRDYVANEG*ETFLSYEDTQQDILVGLLRLRKCGQNVTCSELKGRCSIVRELHV 343 +EVEL+RRDY ANEG ETFLSYEDTQQDIL+GLLRLRKCG+NVTC EL GRCSIVRELHV Sbjct: 444 DEVELVRRDYAANEGWETFLSYEDTQQDILIGLLRLRKCGRNVTCPELVGRCSIVRELHV 503
Query: 342 YGTAVPVHGRDAEKLQHQGYGTLLMEEAERIAISEHRFTRLAVISGVGTRYYYRKLDYEL 163 YGTAVPVHGRDA+KLQHQGYGTLLMEEAERIA EHR ++AVISGVGTR+YYRKL YEL Sbjct: 504 YGTAVPVHGRDADKLQHQGYGTLLMEEAERIARKEHRSKKIAVISGVGTRHYYRKLGYEL 563
Query: 162 EGPHMVKYLV 133 EGP+MVK LV Sbjct: 564 EGPYMVKCLV 573
>tr|A9T8U2|A9T8U2_PHYPA RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase OS=Physcomitrella patens subsp. patens GN=HAG1502 PE=4 SV=1 Length = 566
Score = 227 bits (579), Expect = 2e-58 Identities = 111/130 (85%), Positives = 122/130 (93%), Gaps = 1/130 (0%) Frame = -2
Query: 522 EEVELIRRDYVANEG*ETFLSYEDT-QQDILVGLLRLRKCGQNVTCSELKGRCSIVRELH 346 EEVEL+RRDYVANEG ETFLSYEDT QQDILVGLLRLRKCG+N TC EL GRCS+VRELH Sbjct: 434 EEVELVRRDYVANEGWETFLSYEDTHQQDILVGLLRLRKCGRNTTCPELMGRCSVVRELH 493
Query: 345 VYGTAVPVHGRDAEKLQHQGYGTLLMEEAERIAISEHRFTRLAVISGVGTRYYYRKLDYE 166 VYGTAVPVHGR+ +KLQHQGYGTLLMEEAERI+++EHR T+LAVISGVGTR+YYRKL YE Sbjct: 494 VYGTAVPVHGRENDKLQHQGYGTLLMEEAERISLTEHRSTKLAVISGVGTRHYYRKLGYE 553
Query: 165 LEGPHMVKYL 136 LEGP+MVKYL Sbjct: 554 LEGPYMVKYL 563
>tr|A7QZ22|A7QZ22_VITVI Chromosome chr17 scaffold_263, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010464001 PE=4 SV=1 Length = 563
Score = 226 bits (577), Expect = 4e-58 Identities = 111/130 (85%), Positives = 119/130 (91%) Frame = -2
Query: 522 EEVELIRRDYVANEG*ETFLSYEDTQQDILVGLLRLRKCGQNVTCSELKGRCSIVRELHV 343 EEVEL+RRDY ANEG ETFLSYED +QDILVGLLRLRKCG+N TC EL GRCSIVRELHV Sbjct: 434 EEVELVRRDYTANEGWETFLSYEDIRQDILVGLLRLRKCGRNTTCPELIGRCSIVRELHV 493
Query: 342 YGTAVPVHGRDAEKLQHQGYGTLLMEEAERIAISEHRFTRLAVISGVGTRYYYRKLDYEL 163 YGTAVPVHGRDA+KLQHQGYGTLLME AERIA EHR T++AVISGVGTR+YYRKL YEL Sbjct: 494 YGTAVPVHGRDADKLQHQGYGTLLMEAAERIAGREHRSTKIAVISGVGTRHYYRKLGYEL 553
Query: 162 EGPHMVKYLV 133 EGP+MVKYLV Sbjct: 554 EGPYMVKYLV 563
>tr|B4FJY4|B4FJY4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 570
Score = 224 bits (571), Expect = 2e-57 Identities = 109/129 (84%), Positives = 118/129 (91%) Frame = -2
Query: 522 EEVELIRRDYVANEG*ETFLSYEDTQQDILVGLLRLRKCGQNVTCSELKGRCSIVRELHV 343 +EVEL+RRDY ANEG ETFLSYEDT+QDIL+GLLRLRKCG+NVTC EL GRCSIVRELHV Sbjct: 441 DEVELVRRDYAANEGWETFLSYEDTRQDILIGLLRLRKCGRNVTCPELVGRCSIVRELHV 500
Query: 342 YGTAVPVHGRDAEKLQHQGYGTLLMEEAERIAISEHRFTRLAVISGVGTRYYYRKLDYEL 163 YGTAVPVHGRD +KLQHQGYGTLLMEEAERIA EHR +LAVISGVGTR+YYRKL YEL Sbjct: 501 YGTAVPVHGRDVDKLQHQGYGTLLMEEAERIAQKEHRSEKLAVISGVGTRHYYRKLGYEL 560
Query: 162 EGPHMVKYL 136 EGP+MVK L Sbjct: 561 EGPYMVKCL 569
>tr|Q0Z9V9|Q0Z9V9_WHEAT Histone acetyltransferase HAT2 OS=Triticum aestivum PE=2 SV=1 Length = 569
Score = 223 bits (568), Expect = 5e-57 Identities = 110/129 (85%), Positives = 118/129 (91%) Frame = -2
Query: 522 EEVELIRRDYVANEG*ETFLSYEDTQQDILVGLLRLRKCGQNVTCSELKGRCSIVRELHV 343 +EVEL+RRDY AN+G ETFLSYEDT+QDIL+GLLRLRKCG+NVT EL GRCSIVRELHV Sbjct: 440 DEVELVRRDYAANDGWETFLSYEDTRQDILIGLLRLRKCGRNVTGPELVGRCSIVRELHV 499
Query: 342 YGTAVPVHGRDAEKLQHQGYGTLLMEEAERIAISEHRFTRLAVISGVGTRYYYRKLDYEL 163 YGTAVPVHGRDAEKLQHQGYGTLLMEEAERIA EHR +LAVISGVGTRYYYRKL YEL Sbjct: 500 YGTAVPVHGRDAEKLQHQGYGTLLMEEAERIARKEHRSKKLAVISGVGTRYYYRKLGYEL 559
Query: 162 EGPHMVKYL 136 EGP+MVK L Sbjct: 560 EGPYMVKCL 568
>tr|B4KER3|B4KER3_DROMO GI22150 OS=Drosophila mojavensis GN=GI22150 PE=4 SV=1 Length = 563
Score = 189 bits (480), Expect = 7e-47 Identities = 94/128 (73%), Positives = 104/128 (81%) Frame = -2
Query: 519 EVELIRRDYVANEG*ETFLSYEDTQQDILVGLLRLRKCGQNVTCSELKGRCSIVRELHVY 340 E+ELIRRDYVAN G ETFLSYED +QDILVGLLRLRKC EL+G CSIVRELHVY Sbjct: 421 EIELIRRDYVANGGWETFLSYEDPEQDILVGLLRLRKCSSETFRPELQGNCSIVRELHVY 480
Query: 339 GTAVPVHGRDAEKLQHQGYGTLLMEEAERIAISEHRFTRLAVISGVGTRYYYRKLDYELE 160 G+ VPV RD K QHQG+GTLLMEEA+RIA+ EH T++AVISGVGTR YYRKL Y LE Sbjct: 481 GSVVPVSSRDPTKFQHQGFGTLLMEEAQRIAVEEHESTKIAVISGVGTRNYYRKLGYTLE 540
Query: 159 GPHMVKYL 136 GP+MVK L Sbjct: 541 GPYMVKDL 548
>tr|B6MKG1|B6MKG1_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_123517 PE=4 SV=1 Length = 550
Score = 186 bits (472), Expect = 6e-46 Identities = 94/128 (73%), Positives = 103/128 (80%) Frame = -2
Query: 519 EVELIRRDYVANEG*ETFLSYEDTQQDILVGLLRLRKCGQNVTCSELKGRCSIVRELHVY 340 EVELIRRDYVAN G ETFLSYED +QDIL+GLLRLRKC + ELKG CSIVRELHVY Sbjct: 423 EVELIRRDYVANGGWETFLSYEDPEQDILIGLLRLRKCSEETFRPELKGGCSIVRELHVY 482
Query: 339 GTAVPVHGRDAEKLQHQGYGTLLMEEAERIAISEHRFTRLAVISGVGTRYYYRKLDYELE 160 G+ VPV RD K QHQG+G LLMEEAERIA EH ++AVISGVGTR YYRK+ YELE Sbjct: 483 GSVVPVSSRDPGKFQHQGFGMLLMEEAERIAREEHGANKIAVISGVGTRNYYRKIGYELE 542
Query: 159 GPHMVKYL 136 GP+MVK L Sbjct: 543 GPYMVKKL 550
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