BP915890
Clone id YMU001_000079_B05
Library
Length 352
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000079_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCCAAAAACAAGAGAGAGAGAGTATAGACACAATGATAATGCTCAAAGTGTAAAGATTAA
CTAGAAAATAGCCTCTAATATAGGCTTGGTAGTTACATTAATTGGCTAGAGAGGTTGCAT
CATTTTCCTATTGGAACTAGTCATCATTTCATCCATCCTAGTAGTCATGTGGTTCCATAA
GTGCGGGCTTACCCTTAAAATTTCCTCCTTAAGCCAACACTTGGGGAAAAATAAAAATGG
TTTTGTGTTTGTCATACAACACTCCTAGGTTTATAGGATTCAACTACCCTAATTCAACAT
GTTGGTTCTCACTGGATTTAACACTCATGGTTCTTAACTAGATACATCATGG
■■Homology search results ■■ -
sp_hit_id P55386
Definition sp|P55386|Y4CD_RHISN Uncharacterized protein y4cD OS=Rhizobium sp. (strain NGR234)
Align length 31
Score (bit) 29.3
E-value 6.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915890|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_B05.
(352 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P55386|Y4CD_RHISN Uncharacterized protein y4cD OS=Rhizobium s... 29 6.3

>sp|P55386|Y4CD_RHISN Uncharacterized protein y4cD OS=Rhizobium sp.
(strain NGR234) GN=y4cD PE=4 SV=1
Length = 640

Score = 29.3 bits (64), Expect = 6.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2

Query: 204 EILRVSPHLWNHMTTRMDEMMTSSNRKMMQP 112
EI++ LW H T ++E++T++ RK M P
Sbjct: 130 EIVKAHEGLWAHSTPVLEEVVTNAVRKAMAP 160


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915890|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_B05.
(352 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******