BP915899 |
Clone id |
YMU001_000079_C04 |
Library |
YMU01 |
Length |
528 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000079_C04. |
Accession |
BP915899 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL914Contig1 |
Sequence |
CTGTTCCATGGTTAATTTCTCAAAGTCAACTGCCTCTTCTGGCATCTCCACCCCATGAAC CCTTGAAACAAAGGCAAGAACCTCAGTTCCGGATATTTTCTTCAGCACTTTCTTGGCAAC TGCTCCAGCTGCCACCCTTCCAATAGTCTCTCTCGCGGAGGACCTACCACCACCTTGAAC AGCCCGAATCCCATACTTGAAATCATAGGTAGCATCTGCATGGGATGGTCTGTAGGCAAG CGACATTTCTTGATAGTCCCCTCCTCTTTGATCTGTATTTGGCACGTTCACGGCAATTGG AGTTCCCAAGGTAAGACCGTCCGCAATACCAGACAATATTGAGCAGGTATCGGTCTCCTT TCGAGGAGTTGTGATGCGGCTTTGACCTGGCCTCCTCCTATCCAGCTCAAACTGCATGTC TGCTTCAGTGAGCGGTAGTCTTGGAGGAACCCCATCAATGACACAACCAACACCTCCACC ATGCGACTCGCCATATGTGGTCACTCGAAACAAATTTCCAAATGTATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q42885 |
Definition |
sp|Q42885|AROC2_SOLLC Chorismate synthase 2, chloroplastic OS=Solanum lycopersicum |
Align length |
176 |
Score (bit) |
272.0 |
E-value |
8.0e-73 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915899|Adiantum capillus-veneris mRNA, clone: YMU001_000079_C04. (528 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q42885|AROC2_SOLLC Chorismate synthase 2, chloroplastic OS=So... 272 8e-73 sp|Q42884|AROC1_SOLLC Chorismate synthase 1, chloroplastic OS=So... 269 5e-72 sp|P57720|AROC_ARATH Chorismate synthase, chloroplastic OS=Arabi... 260 3e-69 sp|P27793|AROC_CORSE Chorismate synthase, chloroplastic OS=Coryd... 257 2e-68 sp|Q31RS5|AROC_SYNE7 Chorismate synthase OS=Synechococcus elonga... 225 9e-59 sp|Q5N2I0|AROC_SYNP6 Chorismate synthase OS=Synechococcus sp. (s... 223 6e-58 sp|Q8DLM1|AROC_THEEB Chorismate synthase OS=Thermosynechococcus ... 217 3e-56 sp|B0C2W2|AROC_ACAM1 Chorismate synthase OS=Acaryochloris marina... 213 5e-55 sp|Q110N5|AROC_TRIEI Chorismate synthase OS=Trichodesmium erythr... 212 1e-54 sp|P23353|AROC_SYNY3 Chorismate synthase OS=Synechocystis sp. (s... 210 3e-54 sp|Q2JLD4|AROC_SYNJB Chorismate synthase OS=Synechococcus sp. GN... 207 2e-53 sp|Q3MFM3|AROC_ANAVT Chorismate synthase OS=Anabaena variabilis ... 207 3e-53 sp|Q8YYP9|AROC_ANASP Chorismate synthase OS=Anabaena sp. (strain... 207 3e-53 sp|Q2JXD0|AROC_SYNJA Chorismate synthase OS=Synechococcus sp. (s... 207 3e-53 sp|Q0ID82|AROC_SYNS3 Chorismate synthase OS=Synechococcus sp. (s... 202 8e-52 sp|A5GW34|AROC_SYNR3 Chorismate synthase OS=Synechococcus sp. (s... 201 2e-51 sp|A5GIL9|AROC_SYNPW Chorismate synthase OS=Synechococcus sp. (s... 199 7e-51 sp|Q3AMV2|AROC_SYNSC Chorismate synthase OS=Synechococcus sp. (s... 199 9e-51 sp|Q7U9F0|AROC_SYNPX Chorismate synthase OS=Synechococcus sp. (s... 198 2e-50 sp|B0JWQ2|AROC_MICAN Chorismate synthase OS=Microcystis aerugino... 197 2e-50 sp|Q3AUR6|AROC_SYNS9 Chorismate synthase OS=Synechococcus sp. (s... 194 2e-49 sp|Q7V4Y9|AROC_PROMM Chorismate synthase OS=Prochlorococcus mari... 190 4e-48 sp|P46894|AROC_PROMA Chorismate synthase OS=Prochlorococcus mari... 190 4e-48 sp|A2CCA2|AROC_PROM3 Chorismate synthase OS=Prochlorococcus mari... 190 4e-48 sp|Q31CV7|AROC_PROM9 Chorismate synthase OS=Prochlorococcus mari... 188 1e-47 sp|Q7V364|AROC_PROMP Chorismate synthase OS=Prochlorococcus mari... 186 5e-47 sp|A2BP22|AROC_PROMS Chorismate synthase OS=Prochlorococcus mari... 186 6e-47 sp|A2BUK4|AROC_PROM5 Chorismate synthase OS=Prochlorococcus mari... 184 2e-46 sp|A3PAU4|AROC_PROM0 Chorismate synthase OS=Prochlorococcus mari... 184 2e-46 sp|A2C058|AROC_PROM1 Chorismate synthase OS=Prochlorococcus mari... 182 9e-46
>sp|Q42885|AROC2_SOLLC Chorismate synthase 2, chloroplastic OS=Solanum lycopersicum GN=CS2 PE=2 SV=1 Length = 431
Score = 272 bits (695), Expect = 8e-73 Identities = 131/176 (74%), Positives = 146/176 (82%) Frame = -1
Query: 528 NTFGNLFRVTTYGESHGGGVGCVIDGVPPRLPLTEADMQFELDRRRPGQSRITTPRKETD 349 NTFGN FRVTT+GESHGGGVGC+IDG PPRLPL+E+DMQ ELDRRRPGQSRITTPRKETD Sbjct: 51 NTFGNYFRVTTFGESHGGGVGCIIDGCPPRLPLSESDMQVELDRRRPGQSRITTPRKETD 110
Query: 348 TCSILSGIADGLTLGTPIAVNVPNTDQRGGDYQEMSLAYRPSHADATYDFKYGIRAVQGG 169 TC I SG ADGLT G+PI V VPNTDQRG DY EMSLAYRPSHADATYDFKYG+R+VQGG Sbjct: 111 TCKISSGTADGLTTGSPIKVEVPNTDQRGNDYSEMSLAYRPSHADATYDFKYGVRSVQGG 170
Query: 168 GRSSARETIGRXXXXXXXXXXXXKISGTEVLAFVSRVHGVEMPEEAVDFEKLTMEQ 1 GRSSARETIGR SGTE+LA+VS+VH V +PE+ VD + +T+EQ Sbjct: 171 GRSSARETIGRVAAGAVAKKILKLYSGTEILAYVSQVHNVVLPEDLVDNQIVTLEQ 226
>sp|Q42884|AROC1_SOLLC Chorismate synthase 1, chloroplastic OS=Solanum lycopersicum GN=CS1 PE=2 SV=1 Length = 440
Score = 269 bits (688), Expect = 5e-72 Identities = 129/176 (73%), Positives = 145/176 (82%) Frame = -1
Query: 528 NTFGNLFRVTTYGESHGGGVGCVIDGVPPRLPLTEADMQFELDRRRPGQSRITTPRKETD 349 +TFGN FRVTT+GESHGGGVGC+IDG PPRLPL+E+DMQ ELDRRRPGQSRITTPRKETD Sbjct: 57 STFGNYFRVTTFGESHGGGVGCIIDGCPPRLPLSESDMQVELDRRRPGQSRITTPRKETD 116
Query: 348 TCSILSGIADGLTLGTPIAVNVPNTDQRGGDYQEMSLAYRPSHADATYDFKYGIRAVQGG 169 TC I SG ADGLT G+PI V VPNTDQRG DY EMSLAYRPSHADATYDFKYG+R+VQGG Sbjct: 117 TCKISSGTADGLTTGSPIKVEVPNTDQRGNDYSEMSLAYRPSHADATYDFKYGVRSVQGG 176
Query: 168 GRSSARETIGRXXXXXXXXXXXXKISGTEVLAFVSRVHGVEMPEEAVDFEKLTMEQ 1 GRSSARETIGR SG EVLA+VS+VH V +PE+ +D + +T+EQ Sbjct: 177 GRSSARETIGRVAAGAVAKKILKLYSGAEVLAYVSQVHQVVLPEDLIDHQNVTLEQ 232
>sp|P57720|AROC_ARATH Chorismate synthase, chloroplastic OS=Arabidopsis thaliana GN=EMB1144 PE=2 SV=2 Length = 436
Score = 260 bits (665), Expect = 3e-69 Identities = 123/176 (69%), Positives = 147/176 (83%) Frame = -1
Query: 528 NTFGNLFRVTTYGESHGGGVGCVIDGVPPRLPLTEADMQFELDRRRPGQSRITTPRKETD 349 +++G FRV+T+GESHGGGVGC+IDG PPR+PLTE+D+QF+LDRRRPGQSRITTPRKETD Sbjct: 53 SSYGTHFRVSTFGESHGGGVGCIIDGCPPRIPLTESDLQFDLDRRRPGQSRITTPRKETD 112
Query: 348 TCSILSGIADGLTLGTPIAVNVPNTDQRGGDYQEMSLAYRPSHADATYDFKYGIRAVQGG 169 TC I SG+++G+T GTPI V VPNTDQRG DY EMS+AYRPSHADATYD KYG+R+VQGG Sbjct: 113 TCRISSGVSEGMTTGTPIHVFVPNTDQRGLDYSEMSVAYRPSHADATYDMKYGVRSVQGG 172
Query: 168 GRSSARETIGRXXXXXXXXXXXXKISGTEVLAFVSRVHGVEMPEEAVDFEKLTMEQ 1 GRSSARETIGR + +GTE+LA+VS+VH V +PEE VD E LT+EQ Sbjct: 173 GRSSARETIGRVAPGALAKKILKQFAGTEILAYVSQVHHVVLPEELVDHENLTLEQ 228
>sp|P27793|AROC_CORSE Chorismate synthase, chloroplastic OS=Corydalis sempervirens PE=1 SV=1 Length = 447
Score = 257 bits (657), Expect = 2e-68 Identities = 122/176 (69%), Positives = 143/176 (81%) Frame = -1
Query: 528 NTFGNLFRVTTYGESHGGGVGCVIDGVPPRLPLTEADMQFELDRRRPGQSRITTPRKETD 349 ++FG +F+VTTYGESHGGGVGCVIDG PPR P++EAD+Q +LDRRRPGQSRITTPRKETD Sbjct: 61 SSFGKVFQVTTYGESHGGGVGCVIDGCPPRFPISEADIQSDLDRRRPGQSRITTPRKETD 120
Query: 348 TCSILSGIADGLTLGTPIAVNVPNTDQRGGDYQEMSLAYRPSHADATYDFKYGIRAVQGG 169 TC I SG+ADG T G+PI ++VPNTDQRG DY EM+ AYRPSHADATYDFKYG+R+VQGG Sbjct: 121 TCKIYSGVADGFTTGSPIHISVPNTDQRGNDYSEMAKAYRPSHADATYDFKYGVRSVQGG 180
Query: 168 GRSSARETIGRXXXXXXXXXXXXKISGTEVLAFVSRVHGVEMPEEAVDFEKLTMEQ 1 GRSSARETIGR +GTEVLA+VS+ H V +PE VD E L++EQ Sbjct: 181 GRSSARETIGRVAAGALAKKILKAYAGTEVLAYVSQAHKVVLPEGLVDHETLSLEQ 236
>sp|Q31RS5|AROC_SYNE7 Chorismate synthase OS=Synechococcus elongatus (strain PCC 7942) GN=aroC PE=3 SV=1 Length = 362
Score = 225 bits (574), Expect = 9e-59 Identities = 111/176 (63%), Positives = 135/176 (76%) Frame = -1
Query: 528 NTFGNLFRVTTYGESHGGGVGCVIDGVPPRLPLTEADMQFELDRRRPGQSRITTPRKETD 349 ++FG+LFR++T+GESHGGGVG VIDG PPRL ++EA++QFELDRRRPGQS+ITTPRKE D Sbjct: 3 SSFGHLFRISTFGESHGGGVGVVIDGCPPRLEISEAEIQFELDRRRPGQSKITTPRKEAD 62
Query: 348 TCSILSGIADGLTLGTPIAVNVPNTDQRGGDYQEMSLAYRPSHADATYDFKYGIRAVQGG 169 C ILSG+ DG TLGTPIA+ V N DQR DY EM +AYRPSHADATYD KYGIRAV GG Sbjct: 63 QCEILSGVVDGKTLGTPIAIVVRNKDQRSQDYSEMQVAYRPSHADATYDAKYGIRAVAGG 122
Query: 168 GRSSARETIGRXXXXXXXXXXXXKISGTEVLAFVSRVHGVEMPEEAVDFEKLTMEQ 1 GRSSARETIGR +I+G E++ +V R+ + E +D E +T+EQ Sbjct: 123 GRSSARETIGRVAAGAIAKKLLREIAGVEIVGYVKRIKDL---EGQIDPETVTLEQ 175
>sp|Q5N2I0|AROC_SYNP6 Chorismate synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=aroC PE=3 SV=1 Length = 362
Score = 223 bits (567), Expect = 6e-58 Identities = 110/176 (62%), Positives = 134/176 (76%) Frame = -1
Query: 528 NTFGNLFRVTTYGESHGGGVGCVIDGVPPRLPLTEADMQFELDRRRPGQSRITTPRKETD 349 ++FG+LFR++T+GESHGGGVG VIDG PPRL ++EA++QFELDRRRPGQS+ITTPRKE D Sbjct: 3 SSFGHLFRISTFGESHGGGVGVVIDGCPPRLEISEAEIQFELDRRRPGQSKITTPRKEAD 62
Query: 348 TCSILSGIADGLTLGTPIAVNVPNTDQRGGDYQEMSLAYRPSHADATYDFKYGIRAVQGG 169 C ILSG+ DG TL TPIA+ V N DQR DY EM +AYRPSHADATYD KYGIRAV GG Sbjct: 63 QCEILSGVVDGKTLDTPIAIVVRNKDQRSQDYSEMQVAYRPSHADATYDAKYGIRAVAGG 122
Query: 168 GRSSARETIGRXXXXXXXXXXXXKISGTEVLAFVSRVHGVEMPEEAVDFEKLTMEQ 1 GRSSARETIGR +I+G E++ +V R+ + E +D E +T+EQ Sbjct: 123 GRSSARETIGRVAAGAIAKKLLREIAGVEIVGYVKRIKDL---EGQIDPETVTLEQ 175
>sp|Q8DLM1|AROC_THEEB Chorismate synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=aroC PE=3 SV=1 Length = 363
Score = 217 bits (552), Expect = 3e-56 Identities = 106/161 (65%), Positives = 125/161 (77%) Frame = -1
Query: 528 NTFGNLFRVTTYGESHGGGVGCVIDGVPPRLPLTEADMQFELDRRRPGQSRITTPRKETD 349 NTFG+LFRVTT+GESHGGGVG V+DG PPRL L+E D+Q ELDRRRPGQSR+TTPR+E+D Sbjct: 3 NTFGHLFRVTTFGESHGGGVGVVVDGCPPRLELSEVDIQKELDRRRPGQSRLTTPRQESD 62
Query: 348 TCSILSGIADGLTLGTPIAVNVPNTDQRGGDYQEMSLAYRPSHADATYDFKYGIRAVQGG 169 C ILSG+ +G TLGTPIA+ V N D R DY EM+ YRPSHADATYD KYGIR QGG Sbjct: 63 RCEILSGVFEGKTLGTPIAILVRNKDTRPEDYAEMAQVYRPSHADATYDAKYGIRNWQGG 122
Query: 168 GRSSARETIGRXXXXXXXXXXXXKISGTEVLAFVSRVHGVE 46 GRSSARETIGR +++GTE++A+V RV +E Sbjct: 123 GRSSARETIGRVAAGAIARKILTQVAGTEIIAYVKRVKDIE 163
>sp|B0C2W2|AROC_ACAM1 Chorismate synthase OS=Acaryochloris marina (strain MBIC 11017) GN=aroC PE=3 SV=1 Length = 364
Score = 213 bits (542), Expect = 5e-55 Identities = 107/176 (60%), Positives = 128/176 (72%) Frame = -1
Query: 528 NTFGNLFRVTTYGESHGGGVGCVIDGVPPRLPLTEADMQFELDRRRPGQSRITTPRKETD 349 NTFG+LFR+TT+GESHGGGVG VIDG PP++ + D+QFELDRRRPGQSRITTPRKETD Sbjct: 3 NTFGHLFRITTFGESHGGGVGVVIDGCPPQIEIAAEDIQFELDRRRPGQSRITTPRKETD 62
Query: 348 TCSILSGIADGLTLGTPIAVNVPNTDQRGGDYQEMSLAYRPSHADATYDFKYGIRAVQGG 169 TC I+SG+ G TLGTPI + V N D R DY EM+ YRPSHADATYD KYGIR QGG Sbjct: 63 TCEIVSGMFQGKTLGTPITILVRNKDTRPQDYSEMAQVYRPSHADATYDAKYGIRNWQGG 122
Query: 168 GRSSARETIGRXXXXXXXXXXXXKISGTEVLAFVSRVHGVEMPEEAVDFEKLTMEQ 1 GRSSARETIGR + +G EV+ +V R+ VE +D +++T+ Q Sbjct: 123 GRSSARETIGRVAAGAIAKKILQQAAGVEVIGYVKRIKTVEAD---IDPDQVTLAQ 175
>sp|Q110N5|AROC_TRIEI Chorismate synthase OS=Trichodesmium erythraeum (strain IMS101) GN=aroC PE=3 SV=1 Length = 370
Score = 212 bits (539), Expect = 1e-54 Identities = 106/176 (60%), Positives = 129/176 (73%) Frame = -1
Query: 528 NTFGNLFRVTTYGESHGGGVGCVIDGVPPRLPLTEADMQFELDRRRPGQSRITTPRKETD 349 N FG+LFRVTT+GESHGGGVG +IDG PP+L + ++Q+ELDRRRPGQS+ITTPRKE+D Sbjct: 3 NIFGHLFRVTTFGESHGGGVGVIIDGCPPKLEINVKEIQYELDRRRPGQSKITTPRKESD 62
Query: 348 TCSILSGIADGLTLGTPIAVNVPNTDQRGGDYQEMSLAYRPSHADATYDFKYGIRAVQGG 169 TC ILSG+ +G TLGTPI + V N D R DYQ+M++ YRPSHADATYD KYGIR QGG Sbjct: 63 TCEILSGVFEGQTLGTPIMIWVRNKDARPQDYQDMAIKYRPSHADATYDAKYGIRNWQGG 122
Query: 168 GRSSARETIGRXXXXXXXXXXXXKISGTEVLAFVSRVHGVEMPEEAVDFEKLTMEQ 1 GRSSARETIGR + SG E++ +V R+ + E VD +TMEQ Sbjct: 123 GRSSARETIGRVASGAIAKKILQQYSGVEIVGYVKRIKNL---EAIVDPTTVTMEQ 175
>sp|P23353|AROC_SYNY3 Chorismate synthase OS=Synechocystis sp. (strain PCC 6803) GN=aroC PE=3 SV=2 Length = 362
Score = 210 bits (535), Expect = 3e-54 Identities = 103/176 (58%), Positives = 128/176 (72%) Frame = -1
Query: 528 NTFGNLFRVTTYGESHGGGVGCVIDGVPPRLPLTEADMQFELDRRRPGQSRITTPRKETD 349 NTFG+LFR+TT+GESHGGGVG +IDG PPRL ++ ++Q +LDRRRPGQS+ITTPRKE D Sbjct: 3 NTFGSLFRITTFGESHGGGVGVIIDGCPPRLEISPEEIQVDLDRRRPGQSKITTPRKEAD 62
Query: 348 TCSILSGIADGLTLGTPIAVNVPNTDQRGGDYQEMSLAYRPSHADATYDFKYGIRAVQGG 169 C ILSG+ +G TLGTPIA+ V N D R DY EM++ YRPSHADATY+ KYGIR QGG Sbjct: 63 QCEILSGVFEGKTLGTPIAILVRNKDARSQDYNEMAVKYRPSHADATYEAKYGIRNWQGG 122
Query: 168 GRSSARETIGRXXXXXXXXXXXXKISGTEVLAFVSRVHGVEMPEEAVDFEKLTMEQ 1 GRSSARETIGR + +G E++A+V + + E VD +T+EQ Sbjct: 123 GRSSARETIGRVAAGAIAKKILAQFNGVEIVAYVKSIQDI---EATVDSNTVTLEQ 175
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RTV8 |
Definition |
tr|A9RTV8|A9RTV8_PHYPA Chorismate synthase OS=Physcomitrella patens subsp. patens |
Align length |
176 |
Score (bit) |
278.0 |
E-value |
2.0e-73 |
Report |
|