BP915903
Clone id YMU001_000079_C09
Library
Length 388
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000079_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGAGTAATGAAGGGAAGGTGGAGCCTATGAAGGGCGATGACCTCCTGTGAATGTGACGA
CTTGTCAACACCAGCATGGTAAGGGTATAGAGTGACCACTCCTATCCTTTTAGCTAGCAA
CAGTTGCAAATAGTTATCGTAATCAACTCGTTGCATGAATTCCACACCATTTAATTGTAG
CCTGTCTCCAGTCCACTGGGTTTACCTATGATAGACAGTTTCTTTAGGATGAGTTTCACG
GGGAGAGGAGAAAGGCCCTTTATCCAACTTCCAAAACAGCAAGGACAGTAGCCAAACCAC
TCCTCTCTAGGACATGGCAATCTCCTTATCACCTCCGCTTCGGTCGAAGTGAGCTGGCAG
CACTCGCTGTGCCGCAAATTGATAGACG
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915903|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_C09.
(388 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A4VNR2
Definition tr|A4VNR2|A4VNR2_PSEU5 DNA repair system protein OS=Pseudomonas stutzeri (strain A1501)
Align length 42
Score (bit) 33.5
E-value 5.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915903|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_C09.
(388 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4VNR2|A4VNR2_PSEU5 DNA repair system protein OS=Pseudomonas ... 33 5.5
tr|B5EA88|B5EA88_GEOBB Asparagine synthase (Glutamine-hydrolyzin... 33 7.1
tr|A6VZM6|A6VZM6_MARMS Putative alkylated DNA repair protein OS=... 33 9.3
tr|B1SFM8|B1SFM8_9STRE Putative uncharacterized protein OS=Strep... 33 9.3
tr|A9RYQ3|A9RYQ3_PHYPA Predicted protein OS=Physcomitrella paten... 33 9.3

>tr|A4VNR2|A4VNR2_PSEU5 DNA repair system protein OS=Pseudomonas
stutzeri (strain A1501) GN=PST_2967 PE=4 SV=1
Length = 212

Score = 33.5 bits (75), Expect = 5.5
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1

Query: 250 ERPFIQLPKQQGQ*PNHSSLGHGNLLITSASVEVSWQHSLCR 375
ER F K G+ + LGHG+LL+ S + + WQH + R
Sbjct: 147 ERRFDLRRKGSGRIQHSLLLGHGSLLVMSGATQHHWQHQIAR 188


>tr|B5EA88|B5EA88_GEOBB Asparagine synthase (Glutamine-hydrolyzing)
OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 /
DSM 16622) GN=Gbem_1778 PE=4 SV=1
Length = 629

Score = 33.1 bits (74), Expect = 7.1
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2

Query: 177 QLNGVEFMQRVDYDNYLQLLLAKRIGVVTLYPYHAGVDKSSHSQEVIAL 31
+LNG+ D D LL RIG LY YHAG D+ + + E+ +L
Sbjct: 118 RLNGMFAFALWDRDTKTLLLARDRIGKKPLYYYHAGGDRIAFASEIKSL 166


>tr|A6VZM6|A6VZM6_MARMS Putative alkylated DNA repair protein
OS=Marinomonas sp. (strain MWYL1) GN=Mmwyl1_2994 PE=4
SV=1
Length = 185

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1

Query: 253 RPFIQLPKQQGQ*PNHSSLGHGNLLITSASVEVSWQHSL 369
RPFI K Q + L G+ L+ SAS +V WQHSL
Sbjct: 128 RPFIFRLKGNHQIKHSVELEDGSWLVMSASTQVLWQHSL 166


>tr|B1SFM8|B1SFM8_9STRE Putative uncharacterized protein
OS=Streptococcus infantarius subsp. infantarius ATCC
BAA-102 GN=STRINF_01493 PE=4 SV=1
Length = 299

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2

Query: 186 DRLQLNGVEFMQRVDYDNYLQLLLAKRIGVVTLYPYHAGVDKSSHSQE 43
D + NGV + YDNY ++ A+ IG L+PY AG D + E
Sbjct: 202 DLMVENGVLDEAKWLYDNYREVQAARAIGYKELFPYFAGEDSLENCVE 249


>tr|A9RYQ3|A9RYQ3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_56441 PE=4 SV=1
Length = 430

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2

Query: 366 RVLPAHFDRSGGDKEIAMS*RGVVWLLSLLFWKLDKGPFSSPRETHPKE 220
R L HFD +GG +A++ ++L LL + P PR THP E
Sbjct: 61 RHLLHHFDNNGGIAIVAVTVINTAYVLVLLLLTSGRDPGIIPRNTHPPE 109