BP915926
Clone id YMU001_000079_E10
Library
Length 513
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000079_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGGGAATATCAGCTCACAGAATCCCTACCAGTCTACACTGTGCAAGGCACTTAAGAATCC
CTACCAGTCTACATTGTGCAAGGCACTTATAGTTTTGGTTCTCACGTTGAGGCCATCGCT
CTTCGCACGGGCTTACAATTCTGCATGCAAAGCATGCTAGGGCGATGGATTTGATTCTAC
CGCTTCATGCATTACGCTTCCGCTATCACACTCGTAGCTCCGTCAAGGACAGACTAAGAA
TGGATTGTTAATATGATTGTTGGTTGCTATCAACACACAACAACACTAAAAAGGACCTAA
AATTTTGACTAGATTCACCAACAAAGTGTCCTATTCAAGTCATCCTCCTACAATCACGAC
CCATACACGGTAGATGGTCAAGATTTGAATTGTGTATCATGTTGCCTCTCTTGATGAGAG
CGTCATACAGAAAGATTCTTGTATGCTTATAGGATAAGCTGCAAATCAGGCATAAGATGC
CTAAGAGCACACATTTTGGGCACACACACACTA
■■Homology search results ■■ -
sp_hit_id Q55CY9
Definition sp|Q55CY9|GDT8_DICDI Probable serine/threonine-protein kinase gdt8 OS=Dictyostelium discoideum
Align length 65
Score (bit) 30.8
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915926|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_E10.
(513 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q55CY9|GDT8_DICDI Probable serine/threonine-protein kinase gd... 31 3.8

>sp|Q55CY9|GDT8_DICDI Probable serine/threonine-protein kinase gdt8
OS=Dictyostelium discoideum GN=gdt8 PE=3 SV=1
Length = 1326

Score = 30.8 bits (68), Expect = 3.8
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +3

Query: 312 DSPTKCPIQVILLQSRPIH----GRWSRFELCIMLPLLMRASYR---KILVCL*DKLQIR 470
D+PT+ P Q +L S+PI R EL I LP+ + + I++C+ K+Q
Sbjct: 751 DTPTQTPTQTPILTSKPITQISVDRNENLELKIALPICLSLALLIGIIIMICIFKKVQSN 810

Query: 471 HKMPK 485
K+ K
Sbjct: 811 SKLKK 815


tr_hit_id A7T327
Definition tr|A7T327|A7T327_NEMVE Predicted protein OS=Nematostella vectensis
Align length 58
Score (bit) 37.0
E-value 0.56
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915926|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_E10.
(513 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7T327|A7T327_NEMVE Predicted protein OS=Nematostella vectens... 37 0.56
tr|B7U381|B7U381_HRSV Glycoprotein (Fragment) OS=Human respirato... 33 8.1

>tr|A7T327|A7T327_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g143825 PE=4 SV=1
Length = 244

Score = 37.0 bits (84), Expect = 0.56
Identities = 23/58 (39%), Positives = 29/58 (50%)
Frame = +3

Query: 33 LHCARHLRIPTSLHCARHL*FWFSR*GHRSSHGLTILHAKHARAMDLILPLHALRFRY 206
LHC RHL + LHC RHL + HR H L + + H R L+L H R R+
Sbjct: 95 LHCMRHLVLQYHLHCMRHLVLQYHL--HRMQH-LVLQYHLH-RMQHLVLQYHLHRMRH 148



Score = 35.4 bits (80), Expect = 1.6
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3

Query: 33 LHCARHLRIPTSLHCARHL*FWFSR*GHRSSHGLTILHAKHARAMDLILPLHALR---FR 203
LHC RHL + LHC RHL + HR H + H + + L LH ++ +
Sbjct: 35 LHCMRHLVLQYHLHCMRHLVLQYHL--HRMQHLVLQYHLHRMQHLVLQYHLHCMQHLVLQ 92

Query: 204 YH 209
YH
Sbjct: 93 YH 94


>tr|B7U381|B7U381_HRSV Glycoprotein (Fragment) OS=Human respiratory
syncytial virus GN=G PE=4 SV=1
Length = 107

Score = 33.1 bits (74), Expect = 8.1
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 13/83 (15%)
Frame = +3

Query: 15 HRIPTSLHCARHLRIPT--------SLHCARHL*FWFSR*GHRSSHGLTIL-----HAKH 155
H+ PT +HCARH I T ++HCARH H +H T + KH
Sbjct: 31 HQYPT-IHCARHNHIKTHRKRHQHLTIHCARH--------NHIKTHNSTAIPLLNHPRKH 81

Query: 156 ARAMDLILPLHALRFRYHTRSSV 224
+ + AL ++H ++ V
Sbjct: 82 NQLHTNTHSIRALHIKFHPKTLV 104