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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915927
Clone id YMU001_000079_E12
Library
Length 441
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000079_E12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTCTATGTCTAGATCATGCCAAGCGTGAGCAGCAACAGCACGACGAGTCATAGAGGAAAG
GATCCGCTCGTTCAGAGGTGGGTGGGGGACACGTGAACCTTTTCCCAGGGGAACCATTGT
CAGTCCATGATACCTTGCGTTCAGCTTCAGCTGGCACAGCCGTGCCGTTCTCTGAGCTCA
TCTCTCACCAAAATGAAGGTTTACTGCTCTGCTCGTGCTGCAAGTTTCCCCAAACTCCCG
AGAGAAGACAATGCCGCTAAAAGGAGGTATGGCAGCAAGGTCATCCGCTGAGGCTAATAA
TAATGAAAGTGCATCATCTACCAGGTCTTCTACAGGTGCTGAAATGTATGTGTAAAGGCG
ATGCACGCTGGAGGCTGGGAAGAAGCAGATGGGTGGAGGGACTTTTTTGGCGAAAAAATG
CAGTTGGGAAACGTGAAGCGA
■■Homology search results ■■ -
sp_hit_id Q0DYB1
Definition sp|Q0DYB1|IPYR_ORYSJ Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica
Align length 32
Score (bit) 48.5
E-value 1.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915927|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_E12.
         (441 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0DYB1|IPYR_ORYSJ Soluble inorganic pyrophosphatase OS=Oryza ...    49   1e-05
sp|A2X8Q3|IPYR_ORYSI Soluble inorganic pyrophosphatase OS=Oryza ...    49   1e-05
sp|O48556|IPYR_MAIZE Soluble inorganic pyrophosphatase OS=Zea ma...    47   4e-05
sp|Q43187|IPYR_SOLTU Soluble inorganic pyrophosphatase OS=Solanu...    46   6e-05
sp|O23979|IPYR_HORVD Soluble inorganic pyrophosphatase OS=Hordeu...    44   2e-04
sp|P21216|IPYR2_ARATH Soluble inorganic pyrophosphatase 2 OS=Ara...    38   0.016
sp|Q9S850|SUOX_ARATH Sulfite oxidase OS=Arabidopsis thaliana GN=...    29   7.5  
sp|Q971J2|RLA0_SULTO Acidic ribosomal protein P0 homolog OS=Sulf...    29   7.5  
sp|A9JS71|ECHD3_XENLA Enoyl-CoA hydratase domain-containing prot...    29   7.5  
sp|Q07116|SUOX_RAT Sulfite oxidase, mitochondrial OS=Rattus norv...    29   9.8  
sp|Q8R086|SUOX_MOUSE Sulfite oxidase, mitochondrial OS=Mus muscu...    29   9.8  
sp|Q60HD0|SUOX_MACFA Sulfite oxidase, mitochondrial OS=Macaca fa...    29   9.8  
sp|P51687|SUOX_HUMAN Sulfite oxidase, mitochondrial OS=Homo sapi...    29   9.8  
sp|P22064|LTB1S_HUMAN Latent-transforming growth factor beta-bin...    29   9.8  
sp|Q14766|LTB1L_HUMAN Latent-transforming growth factor beta-bin...    29   9.8  
sp|P12263|FA8_PIG Coagulation factor VIII OS=Sus scrofa GN=F8 PE...    29   9.8  

>sp|Q0DYB1|IPYR_ORYSJ Soluble inorganic pyrophosphatase OS=Oryza
           sativa subsp. japonica GN=IPP PE=2 SV=1
          Length = 214

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = -1

Query: 99  GSRVPHPPLNERILSSMTRRAVAAHAWHDLDI 4
           GSR P   LNERILSSM+++ VAAH WHDL+I
Sbjct: 12  GSRYPPAALNERILSSMSQKHVAAHPWHDLEI 43


>sp|A2X8Q3|IPYR_ORYSI Soluble inorganic pyrophosphatase OS=Oryza
           sativa subsp. indica GN=IPP PE=2 SV=1
          Length = 214

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = -1

Query: 99  GSRVPHPPLNERILSSMTRRAVAAHAWHDLDI 4
           GSR P   LNERILSSM+++ VAAH WHDL+I
Sbjct: 12  GSRYPPAALNERILSSMSQKHVAAHPWHDLEI 43


>sp|O48556|IPYR_MAIZE Soluble inorganic pyrophosphatase OS=Zea
          mays GN=IPP PE=2 SV=1
          Length = 214

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = -1

Query: 81 PPLNERILSSMTRRAVAAHAWHDLDI 4
          P LNERILSS++RR+VAAH WHDL+I
Sbjct: 18 PKLNERILSSLSRRSVAAHPWHDLEI 43


>sp|Q43187|IPYR_SOLTU Soluble inorganic pyrophosphatase OS=Solanum
          tuberosum GN=PPA PE=2 SV=1
          Length = 211

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = -1

Query: 81 PPLNERILSSMTRRAVAAHAWHDLDI 4
          P LNERILSS++RR+VAAH WHDL+I
Sbjct: 15 PRLNERILSSISRRSVAAHPWHDLEI 40


>sp|O23979|IPYR_HORVD Soluble inorganic pyrophosphatase OS=Hordeum
           vulgare var. distichum GN=IPP PE=2 SV=1
          Length = 215

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = -1

Query: 87  PHPPLNERILSSMTRRAVAAHAWHDLDI 4
           P P LNERILSS++RR   AH WHDL+I
Sbjct: 19  PAPKLNERILSSLSRRGGGAHPWHDLEI 46


>sp|P21216|IPYR2_ARATH Soluble inorganic pyrophosphatase 2
           OS=Arabidopsis thaliana GN=PPA2 PE=2 SV=2
          Length = 218

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = -1

Query: 93  RVPHPPLNERILSSMTRRAVAAHAWHDLDI 4
           R P+  LNER  ++ T R+ AAH WHDL+I
Sbjct: 18  RNPNVTLNERNFAAFTHRSAAAHPWHDLEI 47


>sp|Q9S850|SUOX_ARATH Sulfite oxidase OS=Arabidopsis thaliana GN=SOX
           PE=1 SV=1
          Length = 393

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 282 HPLRLIIMKVHHLPGLLQVLKCMCKGDARWRLGRSRWVEGLFWRKNAVG 428
           +P +L I  +  LP         C G+ R  + + R V G+ W  +A+G
Sbjct: 75  NPRKLFIKDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVSAIG 123


>sp|Q971J2|RLA0_SULTO Acidic ribosomal protein P0 homolog
           OS=Sulfolobus tokodaii GN=rplP0 PE=3 SV=1
          Length = 337

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +3

Query: 18  AKREQQQHDES*RKGSARSEVGGGHVNLFPG 110
           A++++++ +E  +KG +  E+GGG  +LF G
Sbjct: 307 AEKKEEKKEEEEKKGPSEEEIGGGLSSLFGG 337


>sp|A9JS71|ECHD3_XENLA Enoyl-CoA hydratase domain-containing protein
           3, mitochondrial OS=Xenopus laevis GN=echdc3 PE=2 SV=1
          Length = 294

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +3

Query: 99  LFPGEPLSVHDTLRSASAGTAVPFSELISHQNE-GLLLC 212
           LF GEP+S HD L        VP   L S  N   L +C
Sbjct: 196 LFTGEPISAHDALLHGLVSKVVPEENLKSETNRIALKIC 234


>sp|Q07116|SUOX_RAT Sulfite oxidase, mitochondrial OS=Rattus
           norvegicus GN=Suox PE=1 SV=2
          Length = 546

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 279 GHPLRLIIMKVHHLPGLLQVLKCMCKGDARWRLGRSRWVEGLFWRKNAV 425
           G  L L +  +H  P     +   C G+ R  + + + V+GL WR  A+
Sbjct: 241 GQSLSLSLDDLHKFPKHEVTVTLQCAGNRRSEMNKVKEVKGLEWRTGAI 289
tr_hit_id A9NMY6
Definition tr|A9NMY6|A9NMY6_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 34
Score (bit) 59.7
E-value 7.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915927|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_E12.
         (441 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NMY6|A9NMY6_PICSI Putative uncharacterized protein OS=Picea...    60   7e-08
tr|Q9M611|Q9M611_MALDO Soluble inorganic pyrophosphatase OS=Malu...    55   1e-06
tr|O49949|O49949_SOLTU Magnesium dependent soluble inorganic pyr...    55   2e-06
tr|A9PAT6|A9PAT6_POPTR Putative uncharacterized protein OS=Popul...    54   3e-06
tr|Q6KBB0|Q6KBB0_ARAHY Putative inorganic pyrophosphatase OS=Ara...    52   1e-05
tr|A9U500|A9U500_PHYPA Predicted protein OS=Physcomitrella paten...    50   6e-05
tr|Q2P9V0|Q2P9V0_9MAGN Soluble inorganic pyrophosphatase OS=Papa...    50   7e-05
tr|Q75HX3|Q75HX3_ORYSJ Os05g0438500 protein OS=Oryza sativa subs...    49   1e-04
tr|Q5N9F4|Q5N9F4_ORYSJ cDNA clone:J023060L20, full insert sequen...    49   1e-04
tr|A9PJT3|A9PJT3_POPJC Putative uncharacterized protein OS=Popul...    49   1e-04
tr|A9PC87|A9PC87_POPTR Putative uncharacterized protein OS=Popul...    49   1e-04
tr|A2Y531|A2Y531_ORYSI Putative uncharacterized protein OS=Oryza...    49   1e-04
tr|A2WXB3|A2WXB3_ORYSI Putative uncharacterized protein OS=Oryza...    49   1e-04
tr|Q9MAM9|Q9MAM9_ARATH T25K16.5 OS=Arabidopsis thaliana PE=4 SV=1      49   2e-04
tr|Q93V56|Q93V56_ARATH At1g01050/T25K16_5 (Putative soluble inor...    49   2e-04
tr|B7E5N1|B7E5N1_ORYSJ cDNA clone:001-017-G06, full insert seque...    49   2e-04
tr|Q75L10|Q75L10_ORYSJ Os05g0114000 protein OS=Oryza sativa subs...    48   2e-04
tr|Q2HTA8|Q2HTA8_MEDTR Inorganic pyrophosphatase OS=Medicago tru...    48   2e-04
tr|B8AXA3|B8AXA3_ORYSI Putative uncharacterized protein OS=Oryza...    48   2e-04
tr|B4FJX6|B4FJX6_MAIZE Putative uncharacterized protein OS=Zea m...    48   2e-04
tr|A3AZA3|A3AZA3_ORYSJ Putative uncharacterized protein OS=Oryza...    48   2e-04
tr|Q8GXR0|Q8GXR0_ARATH Putative inorganic pyrophosphatase OS=Ara...    47   4e-04
tr|O82793|O82793_ARATH Putative inorganic pyrophosphatase (At2g4...    47   4e-04
tr|O82597|O82597_ARATH Putative inorganic phosphatase OS=Arabido...    47   4e-04
tr|Q7XTL6|Q7XTL6_ORYSJ Os04g0687100 protein OS=Oryza sativa subs...    47   5e-04
tr|Q5JL11|Q5JL11_ORYSJ Putative soluble inorganic pyrophosphatas...    47   5e-04
tr|Q56US1|Q56US1_ORYSJ Inorganic pyrophosphatase (Fragment) OS=O...    47   5e-04
tr|Q2P9V1|Q2P9V1_9MAGN Soluble inorganic pyrophosphatase OS=Papa...    47   5e-04
tr|Q259L2|Q259L2_ORYSA H0701F11.4 protein OS=Oryza sativa GN=H07...    47   5e-04
tr|Q0JFK7|Q0JFK7_ORYSJ Os01g0974700 protein OS=Oryza sativa subs...    47   5e-04

>tr|A9NMY6|A9NMY6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 216

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 105 GKGSRVPHPPLNERILSSMTRRAVAAHAWHDLDI 4
           G  SR PHPPLNERILSS++RR+VAAH WHDL+I
Sbjct: 12  GGESRFPHPPLNERILSSLSRRSVAAHPWHDLEI 45


>tr|Q9M611|Q9M611_MALDO Soluble inorganic pyrophosphatase OS=Malus
           domestica PE=2 SV=1
          Length = 228

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -1

Query: 84  HPPLNERILSSMTRRAVAAHAWHDLDI 4
           HPPLNERILSSMTRR++AAH WHDL+I
Sbjct: 31  HPPLNERILSSMTRRSIAAHPWHDLEI 57


>tr|O49949|O49949_SOLTU Magnesium dependent soluble inorganic
           pyrophosphatase OS=Solanum tuberosum GN=ppa2 PE=2 SV=1
          Length = 217

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = -1

Query: 81  PPLNERILSSMTRRAVAAHAWHDLDIE 1
           PPLNERILSSMTRR+VAAH WHDL+IE
Sbjct: 20  PPLNERILSSMTRRSVAAHPWHDLEIE 46


>tr|A9PAT6|A9PAT6_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 216

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 26/42 (61%), Positives = 31/42 (73%), Gaps = 6/42 (14%)
 Frame = -1

Query: 111 PLGKGSRVP------HPPLNERILSSMTRRAVAAHAWHDLDI 4
           P+   S++P      HPPLNERILSSM RR+VAAH WHDL+I
Sbjct: 4   PIETPSKLPISRHSSHPPLNERILSSMNRRSVAAHPWHDLEI 45


>tr|Q6KBB0|Q6KBB0_ARAHY Putative inorganic pyrophosphatase
          OS=Arachis hypogaea GN=pah767 PE=2 SV=1
          Length = 216

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = -1

Query: 81 PPLNERILSSMTRRAVAAHAWHDLDI 4
          PPLNERI+SSMTRR+VAAH WHDL+I
Sbjct: 20 PPLNERIISSMTRRSVAAHPWHDLEI 45


>tr|A9U500|A9U500_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_156544 PE=4 SV=1
          Length = 218

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
 Frame = -1

Query: 129 HGLTMVPLGKGSRVPHP--PLNERILSSMTRRAVAAHAWHDLDI 4
           +G+  VP  KGS   H   PLN RI+++M RR VAAH WHDL+I
Sbjct: 4   NGVAAVPSKKGSTAVHKATPLNSRIMTTMERRTVAAHPWHDLEI 47


>tr|Q2P9V0|Q2P9V0_9MAGN Soluble inorganic pyrophosphatase OS=Papaver
           rhoeas GN=p26.1b PE=2 SV=1
          Length = 236

 Score = 49.7 bits (117), Expect = 7e-05
 Identities = 25/45 (55%), Positives = 29/45 (64%)
 Frame = -1

Query: 138 ARYHGLTMVPLGKGSRVPHPPLNERILSSMTRRAVAAHAWHDLDI 4
           A+   L  +     S    P LNERILSSM+RRAVAAH WHDL+I
Sbjct: 21  AKNKTLNAIKAASYSSHARPSLNERILSSMSRRAVAAHPWHDLEI 65


>tr|Q75HX3|Q75HX3_ORYSJ Os05g0438500 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0042J17.9 PE=2 SV=1
          Length = 224

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = -1

Query: 87  PHPPLNERILSSMTRRAVAAHAWHDLDI 4
           P P LNERILSS++RR+VAAH WHDL+I
Sbjct: 26  PGPKLNERILSSLSRRSVAAHPWHDLEI 53


>tr|Q5N9F4|Q5N9F4_ORYSJ cDNA clone:J023060L20, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0505D12.37 PE=2 SV=1
          Length = 212

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 22/33 (66%), Positives = 26/33 (78%)
 Frame = -1

Query: 105 GKGSRVPHPPLNERILSSMTRRAVAAHAWHDLD 7
           G   + P P LNERILSS++RR+VAAH WHDLD
Sbjct: 9   GAKPKRPAPRLNERILSSLSRRSVAAHPWHDLD 41


>tr|A9PJT3|A9PJT3_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 212

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 23/33 (69%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
 Frame = -1

Query: 99  GSRVPHPP-LNERILSSMTRRAVAAHAWHDLDI 4
           G R   PP LNERILSSM+RR++AAH WHDL+I
Sbjct: 9   GKRAGWPPVLNERILSSMSRRSIAAHPWHDLEI 41