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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915930
Clone id YMU001_000079_F05
Library
Length 531
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000079_F05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GGAGCTGCAGGCCAACAGAAGGTGGGTAAAGTGATGTTGGTTGCTCGAGGAAAGCCGTGA
GCTATCAAGGGGCATCGTATGCGCAGGTTGTGAGCAAGGCAAAAAAGGTGAAGAGGGAGA
CCTGTAGTAGCAGATAAAGATCGTTGCAAAGTGAATGTCCGAGAGCGACATGTGAAGCTG
GGGGTTGGAGACTTTGGCACCATTTTGCAGTAGAGAAGAGGAGGCCACTGCAATCAAAGG
GAATTGAGGCCAAGGCTAATAAGGGACGGAGTCAGAAATTAGCATTGCATGAAGAGAGAC
TTGGGAGTAACCTACAATACCGAAGGCCGATATGGACGGCAAGTGGACTAAGTGGAACAT
GTGCTAACATACGTAGCAATGTCGCAAGCTACGCCATCAATTGTAAAGACCTCTATTGAA
TTTCAAACTCATCATGACCGAGTTTTCTCCCTTTTCTCTCTAGTTATCTATGCACCCTCA
TCATCAATCTATGTAAGTGTTGGGTGTGTCAAGTTTATGAATGCTCTCTAT
■■Homology search results ■■ -
sp_hit_id Q10136
Definition sp|Q10136|STE7_SCHPO Protein ste7 OS=Schizosaccharomyces pombe
Align length 42
Score (bit) 33.1
E-value 0.85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915930|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_F05.
         (531 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q10136|STE7_SCHPO Protein ste7 OS=Schizosaccharomyces pombe G...    33   0.85 
sp|Q8BQZ4|K1219_MOUSE Protein KIAA1219 OS=Mus musculus GN=Kiaa12...    32   1.5  
sp|Q86X10|K1219_HUMAN Protein KIAA1219 OS=Homo sapiens GN=KIAA12...    32   1.5  
sp|Q2T8Y6|CHEB2_BURTA Chemotaxis response regulator protein-glut...    31   3.2  
sp|P51670|CCL9_MOUSE C-C motif chemokine 9 OS=Mus musculus GN=Cc...    30   7.2  
sp|Q9P2N4|ATS9_HUMAN A disintegrin and metalloproteinase with th...    30   9.4  

>sp|Q10136|STE7_SCHPO Protein ste7 OS=Schizosaccharomyces pombe
           GN=ste7 PE=1 SV=1
          Length = 569

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -2

Query: 224 PPLLYCKMVPKSPTPSFTCRSRTFTLQRSLSATTGLPLHLFC 99
           PP+LY     K P  S+T  + +F  QR +S+ T LP   FC
Sbjct: 341 PPMLY-----KFPQRSYTAPNTSFNSQRRMSSITSLPTASFC 377


>sp|Q8BQZ4|K1219_MOUSE Protein KIAA1219 OS=Mus musculus GN=Kiaa1219
            PE=1 SV=2
          Length = 1484

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
 Frame = -1

Query: 201  GAKVSNPQLHMSLSDIHFATI-----FICYYRSPSSPFLPCSQPAHTMPLDSSRLSSSNQ 37
            G K  NP   M + D   AT+      +  + SPS P  PCS    T  +  SRL + N+
Sbjct: 873  GDKEPNPA-SMRVKDAAEATLTCIMQLLGAFPSPSGPASPCSLVNETTLIKYSRLPTINK 931

Query: 36   HHFTHLLL 13
            H F + +L
Sbjct: 932  HSFRYFVL 939


>sp|Q86X10|K1219_HUMAN Protein KIAA1219 OS=Homo sapiens GN=KIAA1219
            PE=1 SV=1
          Length = 1494

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
 Frame = -1

Query: 201  GAKVSNPQLHMSLSDIHFATI-----FICYYRSPSSPFLPCSQPAHTMPLDSSRLSSSNQ 37
            G K  NP   M + D   AT+      +  + SPS P  PCS    T  +  SRL + N+
Sbjct: 884  GDKEPNPA-SMRVKDAAEATLTCIMQLLGAFPSPSGPASPCSLVNETTLIKYSRLPTINK 942

Query: 36   HHFTHLLL 13
            H F + +L
Sbjct: 943  HSFRYFVL 950


>sp|Q2T8Y6|CHEB2_BURTA Chemotaxis response regulator
           protein-glutamate methylesterase 2 OS=Burkholderia
           thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
           CIP 106301) GN=cheB2 PE=3 SV=2
          Length = 354

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -2

Query: 224 PPLLYCKMVPKSPTPSFTCRSRTFTLQRSLSATTGLPLHLFC 99
           PP+L C+ +P+  T SF  R       R   A  G PLH  C
Sbjct: 195 PPILICQHMPEGFTASFAARLDAICGIRVKEAEQGEPLHYGC 236


>sp|P51670|CCL9_MOUSE C-C motif chemokine 9 OS=Mus musculus GN=Ccl9
           PE=1 SV=1
          Length = 122

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
 Frame = -2

Query: 173 TCRSRTFTLQRSLSATTGLPLHLF----------CLAHNLRIRCPLIAHGFPRATNITLP 24
           T  + T  +Q SL A  GL + +F          CL++N RI+C      FP +   T P
Sbjct: 24  THATETKEVQSSLKAQQGLEIEMFHMGFQDSSDCCLSYNSRIQCSRFIGYFPTSGGCTRP 83


>sp|Q9P2N4|ATS9_HUMAN A disintegrin and metalloproteinase with
            thrombospondin motifs 9 OS=Homo sapiens GN=ADAMTS9 PE=2
            SV=4
          Length = 1935

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +3

Query: 39   GCSRKAVSYQGASYAQVVSKAKKVKRETCSSR*RSLQSECPRATCEAGGWR 191
            G   + +    A Y+++  K +KV    CSS  +    E     C  GGWR
Sbjct: 952  GLGYRTLDIYCAKYSRLDGKTEKVDDGFCSSHPKPSNREKCSGECNTGGWR 1002
tr_hit_id A7S381
Definition tr|A7S381|A7S381_NEMVE Predicted protein OS=Nematostella vectensis
Align length 110
Score (bit) 37.7
E-value 0.37
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915930|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_F05.
         (531 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7S381|A7S381_NEMVE Predicted protein OS=Nematostella vectens...    38   0.37 
tr|B4LVU0|B4LVU0_DROVI GJ24210 OS=Drosophila virilis GN=GJ24210 ...    36   1.1  
tr|Q59IQ0|Q59IQ0_WATSC Cytochrome c oxidase subunit 1 (Fragment)...    36   1.4  
tr|Q6K4R1|Q6K4R1_ORYSJ Putative LZ-NBS-LRR class RGA OS=Oryza sa...    35   2.4  
tr|A3C7H0|A3C7H0_ORYSJ Putative uncharacterized protein OS=Oryza...    35   2.4  
tr|A1BIM8|A1BIM8_CHLPD Sulfatase OS=Chlorobium phaeobacteroides ...    34   5.4  
tr|Q3BW60|Q3BW60_XANC5 Putative uncharacterized protein OS=Xanth...    33   6.9  
tr|Q1IUS6|Q1IUS6_ACIBL ABC efflux pump, inner membrane subunit O...    33   6.9  

>tr|A7S381|A7S381_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g206096 PE=4 SV=1
          Length = 394

 Score = 37.7 bits (86), Expect = 0.37
 Identities = 33/110 (30%), Positives = 51/110 (46%)
 Frame = -1

Query: 342 LPSISAFGIVGYSQVSLHAMLISDSVPY*PWPQFPLIAVASSSLLQNGAKVSNPQLHMSL 163
           L S+ A     Y  +SL ++  S S+PY P P+ P     S SL+   A +S P  +  L
Sbjct: 275 LDSLQASPSYPYKPLSLDSLQASPSIPYKPLPRIP----TSLSLVFLQASLSYP--YKPL 328

Query: 162 SDIHFATIFICYYRSPSSPFLPCSQPAHTMPLDSSRLSSSNQHHFTHLLL 13
             I  +   +    SPS P+ P  +   ++ LDS + S S +     LL+
Sbjct: 329 PRIPTSLPLVSLQASPSIPYKPLPRFPTSLSLDSLQASPSCRVRANPLLI 378


>tr|B4LVU0|B4LVU0_DROVI GJ24210 OS=Drosophila virilis GN=GJ24210
           PE=4 SV=1
          Length = 475

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
 Frame = +3

Query: 63  YQGASYAQVVSKAKKVKRETCSSR*RSLQSECPRATCEAG----GWRLWHHFAVEKRRPL 230
           ++   Y ++++  K VK E   +  +   S   +   EA      W   +    E + P 
Sbjct: 209 HEKLKYTEILNNVKAVKVEHFKNYVQVTDSHGKKHKAEAVILAIPWDKVNKLQFEPQLPR 268

Query: 231 QSKGIEAKANKGRSQKLALHEERLGSNLQYRRPIWTASGLSGTCANIRSNVASYAIN 401
           Q +    +  K +S            +++Y +P+W + G SG   NIR  V  YA+N
Sbjct: 269 QFRIPSRRTKKSKSMITQY-------SMRYNKPVWISQGYSGQFLNIRPLVVGYALN 318


>tr|Q59IQ0|Q59IQ0_WATSC Cytochrome c oxidase subunit 1 (Fragment)
           OS=Watasenia scintillans GN=COI PE=3 SV=1
          Length = 217

 Score = 35.8 bits (81), Expect = 1.4
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = -1

Query: 243 FPLIAVASSSLLQNGAKVSNPQLHMSLSDIHFATIFIC----YYRSPSSPFLPCSQPAHT 76
           FPL     SS+L +     N  L+   S  +  T FIC    YYR PS+PF  C+  ++ 
Sbjct: 130 FPLHLAGVSSILGSYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYY 189

Query: 75  MPLDSSRL 52
             ++S  L
Sbjct: 190 YIINSPLL 197


>tr|Q6K4R1|Q6K4R1_ORYSJ Putative LZ-NBS-LRR class RGA OS=Oryza
           sativa subsp. japonica GN=OSJNBa0030M21.32 PE=4 SV=1
          Length = 900

 Score = 35.0 bits (79), Expect = 2.4
 Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
 Frame = -3

Query: 280 NF*LR---PLLALASIPFDCSGLLFSTAKWCQSLQPPASHVALGHSLCNDLYLLLQVSLF 110
           NF LR   P L L S+  D  G++    KW  SL P  + V+LG+  C D  LL++ S F
Sbjct: 759 NFLLRLKTPPLLLESVRID--GVMDQLPKWFNSLLPNLASVSLGYDSCTDDELLVR-SAF 815

Query: 109 TFFAL 95
            F AL
Sbjct: 816 KFPAL 820


>tr|A3C7H0|A3C7H0_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_031242 PE=4 SV=1
          Length = 1088

 Score = 35.0 bits (79), Expect = 2.4
 Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
 Frame = -3

Query: 280  NF*LR---PLLALASIPFDCSGLLFSTAKWCQSLQPPASHVALGHSLCNDLYLLLQVSLF 110
            NF LR   P L L S+  D  G++    KW  SL P  + V+LG+  C D  LL++ S F
Sbjct: 947  NFLLRLKTPPLLLESVRID--GVMDQLPKWFNSLLPNLASVSLGYDSCTDDELLVR-SAF 1003

Query: 109  TFFAL 95
             F AL
Sbjct: 1004 KFPAL 1008


>tr|A1BIM8|A1BIM8_CHLPD Sulfatase OS=Chlorobium phaeobacteroides
           (strain DSM 266) GN=Cpha266_2263 PE=4 SV=1
          Length = 563

 Score = 33.9 bits (76), Expect = 5.4
 Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 13/103 (12%)
 Frame = -1

Query: 306 SQVSLHAMLISDSVPY*PWPQFPLIAVASSSLLQNGAKVSNPQLHMSLSDIHFATIFICY 127
           S  SL AML S+ VPY  +    L    +++          P L  S  DI F T+FI  
Sbjct: 281 SYTSLIAMLTSEQVPYRSYTDTGLYDAVNNA----------PNLARSFKDIGFHTLFISI 330

Query: 126 YRSPSSPFLPCSQP------AHTMP-------LDSSRLSSSNQ 37
           Y     PF+P  +        H +P       ++SSR+ S+ +
Sbjct: 331 Y--DDQPFIPVRRDWSKIMHRHDLPAGKQWVSVESSRMESATE 371


>tr|Q3BW60|Q3BW60_XANC5 Putative uncharacterized protein
           OS=Xanthomonas campestris pv. vesicatoria (strain 85-10)
           GN=XCV1272 PE=4 SV=1
          Length = 443

 Score = 33.5 bits (75), Expect = 6.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -3

Query: 196 QSLQPPASHVALGHSLCNDLYLLLQVSLFTFFALLTTCAYDAP 68
           +S +PP   + + H  C +L ++    L T  AL   CA+ AP
Sbjct: 13  RSTEPPDCDIGVSHPACENLAMIKPFLLLTLTALCAACAHPAP 55


>tr|Q1IUS6|Q1IUS6_ACIBL ABC efflux pump, inner membrane subunit
           OS=Acidobacteria bacterium (strain Ellin345)
           GN=Acid345_0369 PE=4 SV=1
          Length = 855

 Score = 33.5 bits (75), Expect = 6.9
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +3

Query: 165 ATCEAGGWRLWHHFAVEKRRPLQSKGIEAKANKGRSQKLALHEERLGSNL--QYRRPIWT 338
           A  EAG   LWH    E+ + +++K  + + N G    L LH    G +L  QYR P+  
Sbjct: 246 AQAEAGLDSLWHSAREEELKEVRNKSDKFRENFGPKSHLYLHNGARGFSLLDQYRMPMLI 305

Query: 339 ASGL 350
             G+
Sbjct: 306 VMGM 309