BP915931
Clone id YMU001_000079_F06
Library
Length 270
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000079_F06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGCTGATGCTCTCTCCAATATTTAATGTGCCACGCCTTAATTCCTCAACCGCAAGAGGCG
CTGCCTCTGCACGTTGAAGAGGCCGCCTGCATCTTTCAGACTCGGAATTCGCAGCTTTGC
CCAAGTTCACCTCATGTTTCTTGTTAGCAGCAGTAATAGGGGGCCGCCCTCTAGTGCGTC
TTTCAATGATCCGGACGGCAATGTCCCGAGGCCCCTTCCATATGAGATGCAGCTCCTTTC
CGATCTTCAGCTCGTTGTCAGCGATGAACC
■■Homology search results ■■ -
sp_hit_id Q61595
Definition sp|Q61595|KTN1_MOUSE Kinectin OS=Mus musculus
Align length 64
Score (bit) 33.1
E-value 0.45
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915931|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_F06.
(270 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q61595|KTN1_MOUSE Kinectin OS=Mus musculus GN=Ktn1 PE=1 SV=1 33 0.45
sp|Q5ZBH5|RH25_ORYSJ DEAD-box ATP-dependent RNA helicase 25 OS=O... 32 0.76
sp|Q5VWN6|CJ018_HUMAN Uncharacterized protein C10orf18 OS=Homo s... 30 3.8
sp|Q46635|AMSE_ERWAM Amylovoran biosynthesis glycosyltransferase... 30 4.9
sp|Q55G81|ERCC2_DICDI TFIIH basal transcription factor complex h... 29 8.4

>sp|Q61595|KTN1_MOUSE Kinectin OS=Mus musculus GN=Ktn1 PE=1 SV=1
Length = 1327

Score = 33.1 bits (74), Expect = 0.45
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = -3

Query: 193 RIIERRTRGRPPITAANKKHEVNLGKAANSESERCRRPLQRAEAAPLAVEELRRGTLNIG 14
++I +T + NKK E+ G S+SE R + ++A+P E+ LN+
Sbjct: 46 KLISTKTDKKKAEKKKNKKKEIQNGTLRESDSEHVPRDFKLSDASPAEDEQFVPAPLNVA 105

Query: 13 ESIS 2
E+ S
Sbjct: 106 ETSS 109


>sp|Q5ZBH5|RH25_ORYSJ DEAD-box ATP-dependent RNA helicase 25
OS=Oryza sativa subsp. japonica GN=Os01g0618400 PE=2
SV=1
Length = 594

Score = 32.3 bits (72), Expect = 0.76
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Frame = -3

Query: 211 PRDIAVRIIERRTRGRPPITAANKK------HEVNLGKAANSESERCRRPLQRAEAAPLA 50
P + +R+ RR RG PP+TAA V G AA + R RR + E LA
Sbjct: 22 PSCLCLRVPARRRRGAPPLTAAKVDVADAVGRRVRSGGAAVPKRRRSRRDAEEEEEEGLA 81

Query: 49 VEELRRG 29
+ G
Sbjct: 82 FSRVVTG 88


>sp|Q5VWN6|CJ018_HUMAN Uncharacterized protein C10orf18 OS=Homo
sapiens GN=C10orf18 PE=1 SV=1
Length = 2430

Score = 30.0 bits (66), Expect = 3.8
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -3

Query: 172 RGRPPITAANKKHEVNLGKAANSESERCRRPLQ--RAEAAPLAVEELRRGTLNIGESIS 2
R +PP+ + +K VN+ K +E+ R R+ LQ + E A E+ RG G SI+
Sbjct: 451 RAKPPVKKSPQKQRVNIVK--GNENPRNRKQLQPVKGETASKLQSEISRGCQEDGISIN 507


>sp|Q46635|AMSE_ERWAM Amylovoran biosynthesis glycosyltransferase
amsE OS=Erwinia amylovora GN=amsE PE=3 SV=1
Length = 266

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3

Query: 235 ELHLIWKGPRDIAVRIIERRTRGRPPITAANKKHEVNLGKAANSESERC 89
E+ L++ GP +++ + R P+ + + LGKA N+ ERC
Sbjct: 33 EIVLVYDGPVSESLKAVATRWANLLPLVIVPLEKNLGLGKALNAGLERC 81


>sp|Q55G81|ERCC2_DICDI TFIIH basal transcription factor complex
helicase subunit OS=Dictyostelium discoideum GN=repD
PE=2 SV=1
Length = 776

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1

Query: 10 SLQYLMCHALIPQPQEALPLHVEEAACIFQTRNSQLCPSSPHVSC 144
S++ + C +P+ ++A EEA + Q RNS++ SP C
Sbjct: 65 SIKLIYCSRTVPEIEQA----TEEARRVLQYRNSEMGEESPKTLC 105


tr_hit_id Q1JT20
Definition tr|Q1JT20|Q1JT20_TOXGO Zinc finger domain containing protein, putative OS=Toxoplasma gondii RH
Align length 84
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915931|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_F06.
(270 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1JT20|Q1JT20_TOXGO Zinc finger domain containing protein, pu... 36 1.1
tr|B6KQK1|B6KQK1_TOXGO Zinc finger DHHC domain-containing protei... 36 1.1
tr|A4U124|A4U124_9PROT Serine/threonine protein kinase OS=Magnet... 33 9.2

>tr|Q1JT20|Q1JT20_TOXGO Zinc finger domain containing protein,
putative OS=Toxoplasma gondii RH GN=TgIa.2020c PE=3 SV=1
Length = 1100

Score = 35.8 bits (81), Expect = 1.1
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = -3

Query: 259 DNELKIGKELHLIWKGPRDIAVRIIERRTRGRPPITAANKKHEVNLGKAANSESERCRRP 80
D+ +GK + P D R ERRTR +PP A +++ L +A+S+S
Sbjct: 170 DSRRVLGKRPRVSRHSPPDAERRSFERRTRAKPPFFARRRENWSRLRSSASSDS------ 223

Query: 79 LQRAEAAPLAVEELRRGTLNIGES 8
+E AP ++++ + GES
Sbjct: 224 -AASETAPRWQKQVKDSCSSSGES 246


>tr|B6KQK1|B6KQK1_TOXGO Zinc finger DHHC domain-containing protein
OS=Toxoplasma gondii ME49 GN=TGME49_093220 PE=4 SV=1
Length = 1268

Score = 35.8 bits (81), Expect = 1.1
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = -3

Query: 259 DNELKIGKELHLIWKGPRDIAVRIIERRTRGRPPITAANKKHEVNLGKAANSESERCRRP 80
D+ +GK + P D R ERRTR +PP A +++ L +A+S+S
Sbjct: 296 DSRRVLGKRPRVSRHSPPDAERRSFERRTRAKPPFFARRRENWSRLRSSASSDS------ 349

Query: 79 LQRAEAAPLAVEELRRGTLNIGES 8
+E AP ++++ + GES
Sbjct: 350 -AASETAPRWQKQVKDSCSSSGES 372


>tr|A4U124|A4U124_9PROT Serine/threonine protein kinase
OS=Magnetospirillum gryphiswaldense GN=MGR_1253 PE=4
SV=1
Length = 298

Score = 32.7 bits (73), Expect = 9.2
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = -3

Query: 211 PRDIAVRIIERRTRGRP----PITAANKKHEVNLGKAANSESERCRRPLQRA 68
P IAV+ +E T GRP P AAN + E+ E + R PL RA
Sbjct: 70 PHIIAVKSMETGTSGRPFFVMPYMAANLRFEIGKDNVTEGEDKSRRLPLARA 121