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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915932
Clone id YMU001_000079_F07
Library
Length 320
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000079_F07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ATCCATGCTCAAACCGAGCCATTGAGACATCAGACCAAAAGAACAACGTCTGGCTTTATA
GGGAGCCACCCGTACATAACCATAACAAGAGCTCGAACGAGAGAAGTGTCCGGCTTAACA
GGGAGCCATCCGTACAAAACATAACATAGTAAATCCGATGTAAAGCAATACCCATAACTA
TCAAGGGTTGCCACCATGAAGGGCGAGCTGCCACCCCGACCCACATGTCCGCTCAACAGG
CTACTAACAATCAAAGGAGAAAATACAGAACACCATGAGCCACCACCGGAGCCAAGAGAG
CCATCATAAATCTCATGCTT
■■Homology search results ■■ -
sp_hit_id Q8UFX0
Definition sp|Q8UFX0|NUOH_AGRT5 NADH-quinone oxidoreductase subunit H OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Align length 49
Score (bit) 32.3
E-value 0.75
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915932|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_F07.
         (320 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8UFX0|NUOH_AGRT5 NADH-quinone oxidoreductase subunit H OS=Ag...    32   0.75 
sp|Q13585|MTR1L_HUMAN Melatonin-related receptor OS=Homo sapiens...    30   2.8  
sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5 ...    30   2.8  
sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5 ...    30   3.7  
sp|Q4U4S6|XIRP2_MOUSE Xin actin-binding repeat-containing protei...    29   8.2  
sp|Q1MIK7|NUOH_RHIL3 NADH-quinone oxidoreductase subunit H OS=Rh...    29   8.2  
sp|Q2K9S5|NUOH1_RHIEC NADH-quinone oxidoreductase subunit H 1 OS...    29   8.2  

>sp|Q8UFX0|NUOH_AGRT5 NADH-quinone oxidoreductase subunit H
           OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
           GN=nuoH PE=3 SV=1
          Length = 348

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -1

Query: 257 PLIVSSLLSGHVGRGGSSPFMVATLDSYGYCFTSDLLCYVLY--GWLPV 117
           P   S L++GH+   GS+P+M+  L  Y        L  +L+  GWLP+
Sbjct: 229 PEAESELVAGHMVEYGSTPYMMFMLGEYAAIVLICCLTTILFLGGWLPI 277


>sp|Q13585|MTR1L_HUMAN Melatonin-related receptor OS=Homo sapiens
           GN=GPR50 PE=2 SV=1
          Length = 613

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +2

Query: 194 P*RASCHPDPHVRSTGY*QSKEKIQNTMSHHRSQESHHKS 313
           P RAS HP PH RS     S    ++  +HH+S  SH K+
Sbjct: 379 PDRASGHPKPHSRS-----SSAYRKSASTHHKSVFSHSKA 413


>sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5
           OS=Homo sapiens GN=CREB5 PE=1 SV=2
          Length = 508

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = +2

Query: 158 M*SNTHNYQGLPP*RASCHPDPHVRSTGY*QSKEKIQNTMSHHRSQESHHKSHA 319
           M S+ H +Q LPP     HP PH       Q      +   HH+    HH SH+
Sbjct: 274 MHSHPHQHQTLPP----HHPYPHQH-----QHPAHHPHPQPHHQQNHPHHHSHS 318


>sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5
           OS=Mus musculus GN=Creb5 PE=2 SV=3
          Length = 357

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +2

Query: 164 SNTHNYQGLPP*RASCHPDPHVRSTGY*QSKEKIQNTMSHHRSQESHHKSHA 319
           S+ H +Q LPP     HP PH       Q      +   HH+    HH SH+
Sbjct: 125 SHPHQHQTLPP----HHPYPHQH-----QHPAHHPHPQPHHQQNHPHHHSHS 167


>sp|Q4U4S6|XIRP2_MOUSE Xin actin-binding repeat-containing protein 2
            OS=Mus musculus GN=Xirp2 PE=1 SV=1
          Length = 3784

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 21   IETSDQKNNVWLYREPPVHNHNKSSNER 104
            I  SD K   WL+   P+H  NK+  E+
Sbjct: 1288 IPPSDVKTTTWLFETTPIHEFNKTRVEK 1315


>sp|Q1MIK7|NUOH_RHIL3 NADH-quinone oxidoreductase subunit H
           OS=Rhizobium leguminosarum bv. viciae (strain 3841)
           GN=nuoH PE=3 SV=1
          Length = 347

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 257 PLIVSSLLSGHVGRGGSSPFMVATLDSYGYCFTSDLLCYVLY--GWLP 120
           P   S L++G +   GSSP+M+  L  Y        L  +L+  GWLP
Sbjct: 229 PEAESELVAGFMVEYGSSPYMMFMLGEYAAVCLMCALTTILFLGGWLP 276


>sp|Q2K9S5|NUOH1_RHIEC NADH-quinone oxidoreductase subunit H 1
           OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=nuoH1
           PE=3 SV=1
          Length = 347

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 257 PLIVSSLLSGHVGRGGSSPFMVATLDSYGYCFTSDLLCYVLY--GWLP 120
           P   S L++G +   GSSP+M+  L  Y        L  +L+  GWLP
Sbjct: 229 PEAESELVAGFMVEYGSSPYMMFMLGEYAAVCLMCALTTILFLGGWLP 276
tr_hit_id A6LWE8
Definition tr|A6LWE8|A6LWE8_CLOB8 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)
Align length 80
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915932|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_F07.
         (320 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6LWE8|A6LWE8_CLOB8 Ribonucleoside-triphosphate reductase, ad...    35   1.4  
tr|Q7Q337|Q7Q337_ANOGA Candidate odorant receptor (AGAP011467-PA...    35   2.4  
tr|Q8MTW0|Q8MTW0_ANOGA Putative odorant receptor Or5 OS=Anophele...    34   4.1  
tr|Q7Q053|Q7Q053_ANOGA AGAP012264-PA (Fragment) OS=Anopheles gam...    33   9.2  

>tr|A6LWE8|A6LWE8_CLOB8 Ribonucleoside-triphosphate reductase,
           adenosylcobalamin-dependent OS=Clostridium beijerinckii
           (strain ATCC 51743 / NCIMB 8052) GN=Cbei_2522 PE=4 SV=1
          Length = 697

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 26/80 (32%), Positives = 36/80 (45%)
 Frame = +3

Query: 12  NRAIETSDQKNNVWLYREPPVHNHNKSSNERSVRLNREPSVQNIT**IRCKAIPITIKGC 191
           N  +      NN  LY+E P  N  K   E S+++N EP   N +  +R K    T KGC
Sbjct: 328 NSEVSHRKMSNNSVLYKEKPSLNKIKKILE-SIKINGEPGFINGSEAMRRKR---TFKGC 383

Query: 192 HHEGRAATPTHMSAQQATNN 251
           +  G     +H     +TNN
Sbjct: 384 NPCGEILLNSHQCCNLSTNN 403


>tr|Q7Q337|Q7Q337_ANOGA Candidate odorant receptor (AGAP011467-PA)
           OS=Anopheles gambiae GN=GPROR5 PE=3 SV=2
          Length = 391

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
 Frame = -1

Query: 275 WCSVFSPLIVSSLLSGHVGRGGSSPFMVATLDSYGYCF-----TSDLLCYVL----YGWL 123
           WCS+   + V+ L +     G    F++ T+++YG+C+     TS++ CY L    YG L
Sbjct: 278 WCSLVLYVAVTGLSTKAANVGVL--FILLTVETYGFCYFGSDLTSEVRCYSLTRAAYGSL 335

Query: 122 PVKPDTSLVRALVMVM 75
             +   S+ R L MV+
Sbjct: 336 WYRRSVSIQRKLRMVL 351


>tr|Q8MTW0|Q8MTW0_ANOGA Putative odorant receptor Or5 OS=Anopheles
           gambiae PE=3 SV=1
          Length = 391

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
 Frame = -1

Query: 275 WCSVFSPLIVSSLLSGHVGRGGSSPFMVATLDSYGYCF-----TSDLLCYVL----YGWL 123
           WCS+   + V+ L +     G    F++ T+++YG+C+     TS+  CY L    YG L
Sbjct: 278 WCSLVLYVAVTGLSTKAANVGVL--FILLTVETYGFCYFGSDLTSEASCYSLTRAAYGSL 335

Query: 122 PVKPDTSLVRALVMVM 75
             +   S+ R L MV+
Sbjct: 336 WYRRSVSIQRKLRMVL 351


>tr|Q7Q053|Q7Q053_ANOGA AGAP012264-PA (Fragment) OS=Anopheles
           gambiae GN=AGAP012264 PE=4 SV=4
          Length = 505

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +1

Query: 1   IHAQTEPLRHQTKRTTSGFIGSHPYITITRARTREVSGLTGSH 129
           I   + PL ++TKR  SG +  HPY     AR R  S  + +H
Sbjct: 103 IGKSSSPLPNETKRRRSGLLTEHPYCVTGLARVRANSNDSATH 145