BP915938 |
Clone id |
YMU001_000079_G02 |
Library |
YMU01 |
Length |
561 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000079_G02. |
Accession |
BP915938 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1391Contig1 |
Sequence |
AGAGAGTAGACGTTTCTCTGCACAACACTCAGAGAACTCTAGAACTCTACACAAGTTTCC TCTCGGCACGATCGCAAGCGAGGGAAGCTTTCATATTTCCCGATAGATGAGATAATAGGC TCTCAAGTATGGCCACAAGCACTGAACCTTTTCGCAGGCTGGTGAAGCTAGTGGCAAGAG CATTCTATGATGATGACATGAATGCAAAGGGAGCAAATAAACCCAAAACAGAAAAATTTG ATAATCGAGGCATTGCAGTGGTGGTTCTTGATGCGCTAACCAGGCGACAATGGGTTAAGG AGGATGATTTGGCAAAGAATTTACGGCTGCATCCAAAACAGTTAAGGCGAACTCTACGTA CTTTAGAGGAAGAAGCATTGATTGCTCGAGAACATCGTCGGGAGACGGCCAAAGGAGTAA AAGCTTATAATGCAGCAATTGCAGCAACCAACGATGGATCAATGAATCAACGGGAGGGAG AGGAGAAGCAAAAACTCCACACACATTCGTATGGTTGCTTGGATTATGCCCAGGTGTATG ACATTGTAAGGTACAGAATAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q557M8 |
Definition |
sp|Q557M8|T2EA_DICDI General transcription factor IIE subunit 1 OS=Dictyostelium discoideum |
Align length |
134 |
Score (bit) |
46.2 |
E-value |
0.0001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S7R4 |
Definition |
tr|A9S7R4|A9S7R4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
141 |
Score (bit) |
226.0 |
E-value |
5.0e-58 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915938|Adiantum capillus-veneris mRNA, clone: YMU001_000079_G02. (561 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S7R4|A9S7R4_PHYPA Predicted protein OS=Physcomitrella paten... 226 5e-58 tr|B8LLR7|B8LLR7_PICSI Putative uncharacterized protein OS=Picea... 211 2e-53 tr|Q6ZB67|Q6ZB67_ORYSJ Os08g0343300 protein OS=Oryza sativa subs... 195 2e-48 tr|A2YU74|A2YU74_ORYSI Putative uncharacterized protein OS=Oryza... 195 2e-48 tr|B4FWI2|B4FWI2_MAIZE Putative uncharacterized protein OS=Zea m... 189 7e-47 tr|B4FSN5|B4FSN5_MAIZE Putative uncharacterized protein OS=Zea m... 189 1e-46 tr|Q93ZW3|Q93ZW3_ARATH Putative uncharacterized protein At1g0328... 174 2e-42 tr|Q9ZVS9|Q9ZVS9_ARATH F15K9.12 protein OS=Arabidopsis thaliana ... 167 5e-40 tr|B4FHH9|B4FHH9_MAIZE Putative uncharacterized protein OS=Zea m... 149 8e-35 tr|Q9SUP2|Q9SUP2_ARATH Putative uncharacterized protein AT4g2034... 138 2e-31 tr|Q6S7C4|Q6S7C4_ARATH TFIIE-alpha 2 (Fragment) OS=Arabidopsis t... 138 2e-31 tr|B8BLY0|B8BLY0_ORYSI Putative uncharacterized protein OS=Oryza... 136 9e-31 tr|Q9SVG6|Q9SVG6_ARATH Putative uncharacterized protein AT4g2081... 123 6e-27 tr|A5CAZ7|A5CAZ7_VITVI Putative uncharacterized protein OS=Vitis... 122 1e-26 tr|A7R8E9|A7R8E9_VITVI Chromosome undetermined scaffold_2500, wh... 122 2e-26 tr|Q2RAU2|Q2RAU2_ORYSJ Os11g0137500 protein OS=Oryza sativa subs... 93 1e-17 tr|A3C8F6|A3C8F6_ORYSJ Putative uncharacterized protein OS=Oryza... 93 1e-17 tr|A2ZB75|A2ZB75_ORYSI Putative uncharacterized protein OS=Oryza... 93 1e-17 tr|A3C3L3|A3C3L3_ORYSJ Putative uncharacterized protein OS=Oryza... 74 7e-12 tr|A4RRX3|A4RRX3_OSTLU Predicted protein OS=Ostreococcus lucimar... 70 1e-10 tr|Q01FP4|Q01FP4_OSTTA Transcription initiation factor IIE, alph... 69 1e-10 tr|A7P2B5|A7P2B5_VITVI Chromosome chr1 scaffold_5, whole genome ... 67 9e-10 tr|Q0IQ75|Q0IQ75_ORYSJ Os12g0140200 protein OS=Oryza sativa subs... 60 6e-08 tr|B8BLZ9|B8BLZ9_ORYSI Putative uncharacterized protein OS=Oryza... 60 6e-08 tr|B8LCE0|B8LCE0_THAPS Predicted protein OS=Thalassiosira pseudo... 55 3e-06 tr|B7P1M1|B7P1M1_IXOSC Transcription initiation factor iie, alph... 47 7e-04 tr|B0DBU0|B0DBU0_LACBS Predicted protein OS=Laccaria bicolor (st... 43 0.010 tr|B3S9K5|B3S9K5_TRIAD Putative uncharacterized protein (Fragmen... 43 0.013 tr|Q6DFT2|Q6DFT2_XENTR General transcription factor IIE, polypep... 42 0.030 tr|Q28GU2|Q28GU2_XENTR General transcription factor IIE, polypep... 42 0.030
>tr|A9S7R4|A9S7R4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_105932 PE=4 SV=1 Length = 483
Score = 226 bits (577), Expect = 5e-58 Identities = 110/141 (78%), Positives = 124/141 (87%) Frame = +3
Query: 138 STEPFRRLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAK 317 S EPFRRLVKLVARAFYD+++ AKG N+ K++K DN+GIAVVVLDALTRRQWVKE+DLAK Sbjct: 2 SIEPFRRLVKLVARAFYDEEIPAKGPNRSKSDKSDNKGIAVVVLDALTRRQWVKEEDLAK 61
Query: 318 NLRLHPKQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKL 497 LRLHPKQLRRTLR LEEE LI REHR+ET KG K YNAA+AA +DG+ ++EGEEK KL Sbjct: 62 KLRLHPKQLRRTLRVLEEEMLIIREHRKETVKGAKVYNAAVAAVSDGTTGEKEGEEKLKL 121
Query: 498 HTHSYGCLDYAQVYDIVRYRI 560 HTHSY CLDYAQVYDIVRYRI Sbjct: 122 HTHSYCCLDYAQVYDIVRYRI 142
>tr|B8LLR7|B8LLR7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 480
Score = 211 bits (538), Expect = 2e-53 Identities = 105/141 (74%), Positives = 118/141 (83%) Frame = +3
Query: 138 STEPFRRLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAK 317 S EPF+RLV+LVARAFYDD + N+PK+ + DNRG+AVVVLDALTRRQWVKEDDLAK Sbjct: 2 SAEPFKRLVRLVARAFYDDT-TTRAENQPKSGRSDNRGMAVVVLDALTRRQWVKEDDLAK 60
Query: 318 NLRLHPKQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKL 497 +L+LH KQLRRTLR EEE LI R+HRRETAKG K +NAAIAAT DG N +EGEEK KL Sbjct: 61 DLKLHSKQLRRTLRFFEEERLITRDHRRETAKGAKVFNAAIAATADGQQNGKEGEEKLKL 120
Query: 498 HTHSYGCLDYAQVYDIVRYRI 560 HTHSY CLDYAQ YD+VRYRI Sbjct: 121 HTHSYCCLDYAQTYDVVRYRI 141
>tr|Q6ZB67|Q6ZB67_ORYSJ Os08g0343300 protein OS=Oryza sativa subsp. japonica GN=OJ1119_B10.8 PE=2 SV=1 Length = 462
Score = 195 bits (495), Expect = 2e-48 Identities = 96/141 (68%), Positives = 114/141 (80%) Frame = +3
Query: 138 STEPFRRLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAK 317 S EPF RLV+L ARAFYDD ++ KG N+PKT + DNRG+AVVVLDALTRRQWV+E+DLAK Sbjct: 3 SMEPFNRLVRLAARAFYDD-ISMKGDNQPKTSRGDNRGMAVVVLDALTRRQWVREEDLAK 61
Query: 318 NLRLHPKQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKL 497 L+LH KQLRR LR EEE L+ R+HR+E+AKG K Y+AA AA DG +EGEEK K+ Sbjct: 62 ALKLHSKQLRRILRFFEEEKLVTRDHRKESAKGAKIYSAAAAAAGDGQSITKEGEEKVKM 121
Query: 498 HTHSYGCLDYAQVYDIVRYRI 560 HTHSY CLDYAQ+ D+VRYRI Sbjct: 122 HTHSYCCLDYAQICDVVRYRI 142
>tr|A2YU74|A2YU74_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28884 PE=4 SV=1 Length = 462
Score = 195 bits (495), Expect = 2e-48 Identities = 96/141 (68%), Positives = 114/141 (80%) Frame = +3
Query: 138 STEPFRRLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAK 317 S EPF RLV+L ARAFYDD ++ KG N+PKT + DNRG+AVVVLDALTRRQWV+E+DLAK Sbjct: 3 SMEPFNRLVRLAARAFYDD-ISMKGDNQPKTSRGDNRGMAVVVLDALTRRQWVREEDLAK 61
Query: 318 NLRLHPKQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKL 497 L+LH KQLRR LR EEE L+ R+HR+E+AKG K Y+AA AA DG +EGEEK K+ Sbjct: 62 ALKLHSKQLRRILRFFEEEKLVTRDHRKESAKGAKIYSAAAAAAGDGQSITKEGEEKVKM 121
Query: 498 HTHSYGCLDYAQVYDIVRYRI 560 HTHSY CLDYAQ+ D+VRYRI Sbjct: 122 HTHSYCCLDYAQICDVVRYRI 142
>tr|B4FWI2|B4FWI2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 460
Score = 189 bits (481), Expect = 7e-47 Identities = 96/141 (68%), Positives = 113/141 (80%) Frame = +3
Query: 138 STEPFRRLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAK 317 S EPF RLVKL ARAFYDD ++ KG N+PKT + DNRG+AVVVLDALTRR WV+E+DLAK Sbjct: 3 SIEPFNRLVKLAARAFYDD-VSMKGDNQPKTSRGDNRGMAVVVLDALTRRPWVREEDLAK 61
Query: 318 NLRLHPKQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKL 497 L+LH KQLRR LR EEE L+ R+HR+E+AK KA+NA AA NDG +EGEEK K+ Sbjct: 62 ALKLHSKQLRRILRFFEEEKLVTRDHRKESAKNAKAHNA--AAANDGQTVAKEGEEKVKM 119
Query: 498 HTHSYGCLDYAQVYDIVRYRI 560 HTHSY CLDYAQ+ D+VRYRI Sbjct: 120 HTHSYCCLDYAQICDVVRYRI 140
>tr|B4FSN5|B4FSN5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 457
Score = 189 bits (479), Expect = 1e-46 Identities = 96/141 (68%), Positives = 113/141 (80%) Frame = +3
Query: 138 STEPFRRLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAK 317 S EPF RLV+L ARAFYDD ++ KG N+PKT + DNRG+AVVVLDALTRR WV+E+DLAK Sbjct: 3 SIEPFNRLVRLAARAFYDD-VSMKGDNQPKTSRGDNRGMAVVVLDALTRRPWVREEDLAK 61
Query: 318 NLRLHPKQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKL 497 L+LH KQLRR LR EEE L+ R+HR+E+AK KA+NA AA NDG +EGEEK KL Sbjct: 62 ALKLHSKQLRRILRFFEEEKLVTRDHRKESAKNAKAHNA--AAANDGQPIAKEGEEKVKL 119
Query: 498 HTHSYGCLDYAQVYDIVRYRI 560 HTHSY CLDYAQ+ D+VRYRI Sbjct: 120 HTHSYCCLDYAQICDVVRYRI 140
>tr|Q93ZW3|Q93ZW3_ARATH Putative uncharacterized protein At1g03280 (TFIIE-alpha 1) OS=Arabidopsis thaliana GN=At1g03280 PE=2 SV=1 Length = 479
Score = 174 bits (442), Expect = 2e-42 Identities = 88/143 (61%), Positives = 109/143 (76%) Frame = +3
Query: 132 ATSTEPFRRLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDL 311 A +PF +LV+LVARAFYDD K N+ K+ + DNRGIA VVLDAL RRQWV+E+DL Sbjct: 10 AVVLQPFVKLVRLVARAFYDD-YTTKSDNQQKSARSDNRGIAAVVLDALARRQWVREEDL 68
Query: 312 AKNLRLHPKQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQ 491 AK+L+LH KQLR+ +R EEE LI R+HR+ETAKG K Y+AA+AAT DG E+K Sbjct: 69 AKDLQLHAKQLRKIIRLFEEEKLIMRDHRKETAKGAKMYSAAVAATTDG-----RAEDKV 123
Query: 492 KLHTHSYGCLDYAQVYDIVRYRI 560 KLHTHSY CLDYAQ+ D+VR+R+ Sbjct: 124 KLHTHSYCCLDYAQICDVVRFRL 146
>tr|Q9ZVS9|Q9ZVS9_ARATH F15K9.12 protein OS=Arabidopsis thaliana GN=F15K9.12 PE=4 SV=1 Length = 506
Score = 167 bits (422), Expect = 5e-40 Identities = 88/152 (57%), Positives = 109/152 (71%), Gaps = 9/152 (5%) Frame = +3
Query: 132 ATSTEPFRRLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDL 311 A +PF +LV+LVARAFYDD K N+ K+ + DNRGIA VVLDAL RRQWV+E+DL Sbjct: 10 AVVLQPFVKLVRLVARAFYDD-YTTKSDNQQKSARSDNRGIAAVVLDALARRQWVREEDL 68
Query: 312 AKNLRLHPKQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQ 491 AK+L+LH KQLR+ +R EEE LI R+HR+ETAKG K Y+AA+AAT DG E+K Sbjct: 69 AKDLQLHAKQLRKIIRLFEEEKLIMRDHRKETAKGAKMYSAAVAATTDG-----RAEDKV 123
Query: 492 KLHTHSYGCLDYA---------QVYDIVRYRI 560 KLHTHSY CLDYA Q+ D+VR+R+ Sbjct: 124 KLHTHSYCCLDYAQARFISSFLQICDVVRFRL 155
>tr|B4FHH9|B4FHH9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 336
Score = 149 bits (377), Expect = 8e-35 Identities = 75/109 (68%), Positives = 87/109 (79%) Frame = +3
Query: 207 KGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAKNLRLHPKQLRRTLRTLEEEALIA 386 KG N+PKT + DNRG+AVVVLDALTRR WV+E+DLAK L+LH KQLRR LR EEE L+ Sbjct: 2 KGDNQPKTSRGDNRGMAVVVLDALTRRPWVREEDLAKALKLHSKQLRRILRFFEEEKLVT 61
Query: 387 REHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKLHTHSYGCLDYAQ 533 R+HR+E+AK KA+NA AA NDG +EGEEK KLHTHSY CLDYAQ Sbjct: 62 RDHRKESAKNAKAHNA--AAANDGQPIAKEGEEKVKLHTHSYCCLDYAQ 108
>tr|Q9SUP2|Q9SUP2_ARATH Putative uncharacterized protein AT4g20340 OS=Arabidopsis thaliana GN=F9F13.4 PE=4 SV=1 Length = 527
Score = 138 bits (347), Expect = 2e-31 Identities = 70/139 (50%), Positives = 97/139 (69%) Frame = +3
Query: 144 EPFRRLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAKNL 323 EPF +LV+L+ R FYD+ + N+ K+ K + +G AV+VLDALTRRQWV+E+DLAK + Sbjct: 15 EPFVKLVRLLVRIFYDN-YTPESDNQQKSVK-NVKGSAVIVLDALTRRQWVREEDLAKEV 72
Query: 324 RLHPKQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKLHT 503 + + K+LR+ +R EE+ + R HR+ETAK K Y+ A+ T DG E+ K HT Sbjct: 73 KRNAKELRKLIRHFEEQKFVMRYHRKETAKRAKMYSYAVGGTTDG-----RAEDNVKFHT 127
Query: 504 HSYGCLDYAQVYDIVRYRI 560 HSY CLDYAQ+YDIVRY++ Sbjct: 128 HSYCCLDYAQIYDIVRYKL 146
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