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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915949
Clone id YMU001_000079_H06
Library
Length 314
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000079_H06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TCTCTTTGTCAGGCAAAGTGAACACCATTGCTCTCCCAATCTTGCTTTGCACCTATCGCC
AAAATCCATGGCCTACCCAAAATGATAGGGTAAGCATTATCTCCTGCCTTCATCACAAAA
AAGTCTATTAGGCACTCTATGCCGATCACCTTGACCTTCACATCGCTGAGCCACACCCAG
ACACCTGGCTTTGATATGGTTGGCCATCCTCATGCGTACATATGGATTGACTACCGCCTT
GAGTCCCGTCTCTTTCATGGCTGCTTCCGTCATGACACAAACCTGTGCTCCACCGTCTAT
GTAAGCTTGTACCT
■■Homology search results ■■ -
sp_hit_id Q7M3K2
Definition sp|Q7M3K2|PELET_DROME Transposable element P transposase OS=Drosophila melanogaster
Align length 44
Score (bit) 30.8
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915949|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_H06.
         (314 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7M3K2|PELET_DROME Transposable element P transposase OS=Dros...    31   2.2  
sp|P94844|DAPB_HELPY Dihydrodipicolinate reductase OS=Helicobact...    30   4.9  
sp|A0PJX8|TMM82_HUMAN Transmembrane protein 82 OS=Homo sapiens G...    29   8.3  
sp|P40087|DDI1_YEAST DNA damage-inducible protein 1 OS=Saccharom...    29   8.3  
sp|Q754R2|DDI1_ASHGO DNA damage-inducible protein 1 OS=Ashbya go...    29   8.3  
sp|Q9ZLW6|DAPB_HELPJ Dihydrodipicolinate reductase OS=Helicobact...    29   8.3  

>sp|Q7M3K2|PELET_DROME Transposable element P transposase
           OS=Drosophila melanogaster GN=T PE=2 SV=2
          Length = 751

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -1

Query: 224 HMYA*GWPTISKPGVWVWLSDVKVKVIGIECLIDFFVMKAGDNA 93
           H+Y  G+P  S+  ++ WLSDV +K   ++ +ID       D+A
Sbjct: 178 HLYKKGFPLPSRTTLYRWLSDVDIKRGCLDVVIDLMDSDGVDDA 221


>sp|P94844|DAPB_HELPY Dihydrodipicolinate reductase OS=Helicobacter
           pylori GN=dapB PE=3 SV=2
          Length = 254

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -1

Query: 167 SDVKVKVIGIECLIDFFVMKAGDNAYPIILGRPWILAIG 51
           +D+K  V   EC+IDF + K  DN    +L  P IL  G
Sbjct: 53  NDLKAFVRACECVIDFSLPKGVDNLLEALLECPKILVSG 91


>sp|A0PJX8|TMM82_HUMAN Transmembrane protein 82 OS=Homo sapiens
           GN=TMEM82 PE=2 SV=2
          Length = 343

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 16/58 (27%)
 Frame = +1

Query: 43  CFAPIAKIHGLPKMIG*ALSPAF----------------ITKKSIRHSMPITLTFTSL 168
           C   +A  HGLP+++G AL+ AF                 T +++R   P+T+ +T L
Sbjct: 190 CLGLLAHAHGLPQLLGRALAIAFAVGDLAAVALINQDFLTTSEAMRFWTPLTICYTLL 247


>sp|P40087|DDI1_YEAST DNA damage-inducible protein 1
           OS=Saccharomyces cerevisiae GN=DDI1 PE=1 SV=1
          Length = 428

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -3

Query: 312 VQAYIDGGAQVCVMTEAAMKETGLKAVVN 226
           V+A++D GAQ  +M+    K+TGL  +++
Sbjct: 215 VKAFVDTGAQTTIMSTRLAKKTGLSRMID 243


>sp|Q754R2|DDI1_ASHGO DNA damage-inducible protein 1 OS=Ashbya
           gossypii GN=DDI1 PE=3 SV=1
          Length = 472

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -3

Query: 312 VQAYIDGGAQVCVMTEAAMKETGLKAVVNPYVR 214
           V+A++D GAQ  +M+ A  + TGL  +V+   R
Sbjct: 274 VKAFVDSGAQSTIMSTALAERTGLGRLVDKRFR 306


>sp|Q9ZLW6|DAPB_HELPJ Dihydrodipicolinate reductase OS=Helicobacter
           pylori J99 GN=dapB PE=3 SV=1
          Length = 254

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 167 SDVKVKVIGIECLIDFFVMKAGDNAYPIILGRPWILAIG 51
           +D+K  V   EC++DF + K  D+   ++L  P IL  G
Sbjct: 53  NDLKAFVKACECVVDFSLPKGVDHLLDVLLECPKILVSG 91
tr_hit_id Q9SKR9
Definition tr|Q9SKR9|Q9SKR9_ARATH Putative Athila retroelement ORF1 protein OS=Arabidopsis thaliana
Align length 45
Score (bit) 38.1
E-value 0.22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915949|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_H06.
         (314 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9SKR9|Q9SKR9_ARATH Putative Athila retroelement ORF1 protein...    38   0.22 
tr|Q9C8Q7|Q9C8Q7_ARATH Athila ORF 1, putative; 43045-40843 OS=Ar...    37   0.64 
tr|Q9M106|Q9M106_ARATH Putative transposon protein OS=Arabidopsi...    35   1.9  
tr|O81509|O81509_ARATH T7M24.3 protein OS=Arabidopsis thaliana G...    35   1.9  
tr|A9SA67|A9SA67_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.5  
tr|A9RE89|A9RE89_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.5  
tr|A9RIV8|A9RIV8_PHYPA Predicted protein OS=Physcomitrella paten...    34   3.2  
tr|A2SBW4|A2SBW4_METPP Acyltransferase-like protein OS=Methylibi...    34   4.2  
tr|A9TWR8|A9TWR8_PHYPA Predicted protein OS=Physcomitrella paten...    34   4.2  
tr|A9RT56|A9RT56_PHYPA Predicted protein OS=Physcomitrella paten...    34   4.2  
tr|A9U3K7|A9U3K7_PHYPA Predicted protein OS=Physcomitrella paten...    33   5.5  
tr|A9U3K5|A9U3K5_PHYPA Predicted protein OS=Physcomitrella paten...    33   5.5  
tr|A9TMV1|A9TMV1_PHYPA Predicted protein OS=Physcomitrella paten...    33   5.5  
tr|A9SQT0|A9SQT0_PHYPA Predicted protein OS=Physcomitrella paten...    33   5.5  
tr|A9SNT0|A9SNT0_PHYPA Predicted protein OS=Physcomitrella paten...    33   5.5  
tr|Q9LKS4|Q9LKS4_ARATH Putative uncharacterized protein T15F17.d...    33   7.1  
tr|Q9C8Q6|Q9C8Q6_ARATH Athila ORF 1, putative; 49840-46364 OS=Ar...    33   7.1  
tr|Q7FZN4|Q7FZN4_ARATH AT4g08050 protein OS=Arabidopsis thaliana...    33   7.1  
tr|A9TMZ2|A9TMZ2_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.1  
tr|A9TLV8|A9TLV8_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.1  
tr|A9T8S7|A9T8S7_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.1  
tr|Q9BK44|Q9BK44_9MUSC Putative transposase OS=Drosophila helvet...    33   7.1  
tr|Q23845|Q23845_DROBF Transposase protein OS=Drosophila bifasci...    33   7.1  
tr|A8N8J9|A8N8J9_COPC7 Putative uncharacterized protein OS=Copri...    31   8.9  
tr|A8NJA7|A8NJA7_COPC7 Predicted protein OS=Coprinopsis cinerea ...    31   9.2  
tr|Q9MA68|Q9MA68_ARATH F2J6.13 protein OS=Arabidopsis thaliana G...    33   9.3  
tr|A9U6L4|A9U6L4_PHYPA Predicted protein OS=Physcomitrella paten...    33   9.3  
tr|A9U620|A9U620_PHYPA Predicted protein OS=Physcomitrella paten...    33   9.3  
tr|A9U290|A9U290_PHYPA Predicted protein OS=Physcomitrella paten...    33   9.3  
tr|A9U044|A9U044_PHYPA Predicted protein OS=Physcomitrella paten...    33   9.3  

>tr|Q9SKR9|Q9SKR9_ARATH Putative Athila retroelement ORF1 protein
           OS=Arabidopsis thaliana GN=At2g10670 PE=4 SV=1
          Length = 929

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = -1

Query: 170 LSDVKVKVIGIECLIDFFVMKA-GDNAYPIILGRPWILAIGAKQD 39
           L DV V + G+E   DF V++  G++  P+ILGRP++ ++GA  D
Sbjct: 636 LEDVPVMINGVEVPTDFVVLEMDGESKDPLILGRPFLASVGAVID 680


>tr|Q9C8Q7|Q9C8Q7_ARATH Athila ORF 1, putative; 43045-40843
           OS=Arabidopsis thaliana GN=T4I21.13 PE=4 SV=1
          Length = 530

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = -1

Query: 170 LSDVKVKVIGIECLIDFFVMKAGDNAY-PIILGRPWILAIGAKQD 39
           L DV V + G+E  IDF V++  + +  P+ILGRP++ + GA  D
Sbjct: 236 LEDVPVMINGVEVPIDFVVLEMDEESKDPLILGRPFLASAGAVID 280


>tr|Q9M106|Q9M106_ARATH Putative transposon protein OS=Arabidopsis
           thaliana GN=AT4g03850 PE=2 SV=1
          Length = 334

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = -1

Query: 170 LSDVKVKVIGIECLIDFFVMKAG-DNAYPIILGRPWILAIGAKQD 39
           L D+ V + G+E  IDF V+    ++  P+ILGRP++ ++GA  D
Sbjct: 135 LKDLPVMINGVEVPIDFVVLDMEVEHKDPLILGRPFLASVGAVID 179


>tr|O81509|O81509_ARATH T7M24.3 protein OS=Arabidopsis thaliana
           GN=T7M24.3 PE=4 SV=1
          Length = 1120

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = -1

Query: 170 LSDVKVKVIGIECLIDFFVMKAG-DNAYPIILGRPWILAIGAKQD 39
           L D+ V + G+E  IDF V+    ++  P+ILGRP++ ++GA  D
Sbjct: 253 LKDLPVMINGVEVPIDFVVLDMEVEHKDPLILGRPFLASVGAVID 297


>tr|A9SA67|A9SA67_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_76625 PE=4 SV=1
          Length = 785

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = -1

Query: 164 DVKVKVIGIECLIDFFVMKAGDNAYPIILGRPWILAIGAKQDWESNGVHFA 12
           DVK ++  +E   +FFV  +    YP+ILG+P+I A   +    ++G H+A
Sbjct: 696 DVKTRIGDVEVEQNFFVQNSA--TYPVILGQPYITAARMETRVLNDGSHYA 744


>tr|A9RE89|A9RE89_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_64957 PE=4 SV=1
          Length = 939

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -1

Query: 170 LSDVKVKVIGIECLIDF--FVMKAGDNAYPIILGRPWILAIGAKQDW 36
           L DV+  +  I   ID+  F +K+   +YPI+L RPW+    A  DW
Sbjct: 746 LVDVETIIAEIAYKIDYVVFQLKSSALSYPILLVRPWLFHAKAHNDW 792


>tr|A9RIV8|A9RIV8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_66721 PE=4 SV=1
          Length = 413

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 19/54 (35%), Positives = 31/54 (57%)
 Frame = -1

Query: 164 DVKVKVIGIECLIDFFVMKAGDNAYPIILGRPWILAIGAKQDWESNGVHFA*QR 3
           DVK+++  +     FFV      +YP+ILG+P+I+AI  +     NG  +A +R
Sbjct: 37  DVKIRIGDVAIEQHFFVQDT--TSYPLILGQPYIMAIRIETKVLDNGSAYARER 88


>tr|A2SBW4|A2SBW4_METPP Acyltransferase-like protein OS=Methylibium
           petroleiphilum (strain PM1) GN=Mpe_A0091 PE=4 SV=1
          Length = 401

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = -1

Query: 203 PTISKPGVWVWLSDVKVK----VIGIECLIDFFVMKAGDNAYPIILGRPWILAIG 51
           P  + P  WVWL DV VK    V+    LI    + +G      +L RPW++A+G
Sbjct: 286 PDYTGPDRWVWLLDVSVKYGSFVLPFTALI--LAVASGHTVLSGLLLRPWMVALG 338


>tr|A9TWR8|A9TWR8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_98312 PE=4 SV=1
          Length = 874

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/51 (39%), Positives = 28/51 (54%)
 Frame = -1

Query: 164 DVKVKVIGIECLIDFFVMKAGDNAYPIILGRPWILAIGAKQDWESNGVHFA 12
           DVK+K+  I     FFV    D +YP+ILG+P+I A   +     NG  +A
Sbjct: 561 DVKIKIGDIATKQYFFVQ---DTSYPLILGQPYITATRMETKVLDNGFAYA 608


>tr|A9RT56|A9RT56_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_70220 PE=4 SV=1
          Length = 311

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/60 (33%), Positives = 33/60 (55%)
 Frame = -1

Query: 191 KPGVWVWLSDVKVKVIGIECLIDFFVMKAGDNAYPIILGRPWILAIGAKQDWESNGVHFA 12
           K G++     V  K+  +E   +FFV    +  YPIILG+P+I+A   +    ++G H+A
Sbjct: 66  KGGLYDVYPAVMAKIEDVEVEQNFFVQN--NCTYPIILGQPYIIATRMENKVLNDGYHYA 123