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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915956
Clone id YMU001_000081_A04
Library
Length 324
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000081_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GGTCCCCTCGATGCTCTAGCGCCCGCACCGGATATGGACCGAACTGTCTCGCGACGTTCT
GAACCCAGCTCACGTACCGCTTTAATGGGCGAACTAGCCCAAACCTATGGGACGTACTAC
CGCCCCGAGGTGGCGAAGAGCCGACATCGAGGTGCCAAAGCTTCCCGTCGATGTGAACTC
TTGGGGAAGATCAGCCTGTTATCCTTAGAGTAACTTTTATCCGTTGAGCGACGGCCCTTC
CACTTGGAACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACTGGTAGGTCTCG
CAGTCGAGCTCCCTTCTGCCTTTG
■■Homology search results ■■ -
sp_hit_id Q9PLI5
Definition sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia muridarum
Align length 86
Score (bit) 65.1
E-value 1.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915956|Adiantum capillus-veneris mRNA, clone:
YMU001_000081_A04.
         (324 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydi...    65   1e-10
sp|Q3B2V9|THIC_PELLD Thiamine biosynthesis protein thiC OS=Pelod...    30   4.8  
sp|A8AAF8|ARGC_IGNH4 N-acetyl-gamma-glutamyl-phosphate/N-acetyl-...    29   8.2  

>sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia
           muridarum GN=TC_0114 PE=4 SV=2
          Length = 122

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 39/86 (45%), Positives = 44/86 (51%)
 Frame = +1

Query: 4   PLDALAPAPDMDRTVSRRSEPSSRTALMGELAQTYGTYYRPEVAKSRHRGAKASRRCXXX 183
           PL   AP  D D+TVSRR EPSSRTAL+GE    +    +P+ A SRHRGAK  RR    
Sbjct: 38  PLKYPAPTKDRDQTVSRRFEPSSRTALIGEQPNPW-DLLQPQDAMSRHRGAKPPRRYELL 96

Query: 184 XXXXXXXXXXXXXXXRRPFHLEPSDH 261
                          RR FH  P DH
Sbjct: 97  VAISLLSPEYLLSVKRRRFHFPPPDH 122


>sp|Q3B2V9|THIC_PELLD Thiamine biosynthesis protein thiC
           OS=Pelodictyon luteolum (strain DSM 273) GN=thiC PE=3
           SV=1
          Length = 565

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 205 RITG*SSPRVHIDGKLWHLDVG 140
           R+ G SS ++H+DG LW L VG
Sbjct: 14  RLYGNSSRKIHVDGTLWPLRVG 35


>sp|A8AAF8|ARGC_IGNH4
           N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-
           aminoadipyl-phosphate reductase OS=Ignicoccus hospitalis
           (strain KIN4/I / DSM 18386 / JCM 14125) GN=argC PE=3
           SV=1
          Length = 356

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = -3

Query: 181 RVHIDGKLWHLDVGSSPPRGGSTSHRFGLVRPL----KRYVSWVQNVARQF 41
           R+ +D K+   + G+ P RGG    R G  RP      R+V+ ++ V R +
Sbjct: 179 RIVVDVKVGSSEAGAKPYRGGHHPEREGTARPYDAEGHRHVAELEQVIRDY 229
tr_hit_id Q4EE25
Definition tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria monocytogenes str. 4b H7858
Align length 103
Score (bit) 142.0
E-value 6.0e-33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915956|Adiantum capillus-veneris mRNA, clone:
YMU001_000081_A04.
         (324 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Liste...   142   6e-33
tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein OS=Rumin...   137   3e-31
tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacil...   134   2e-30
tr|A5ZYK8|A5ZYK8_9FIRM Putative uncharacterized protein OS=Rumin...   132   1e-29
tr|B6G1S6|B6G1S6_9CLOT Putative uncharacterized protein OS=Clost...   115   1e-25
tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein OS=Clost...   108   2e-22
tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein OS=Clost...   108   2e-22
tr|B1BEF3|B1BEF3_CLOBO Putative uncharacterized protein (Fragmen...   108   2e-22
tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein OS=Clost...   108   2e-22
tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein OS=Clost...   108   2e-22
tr|B2E6W4|B2E6W4_STRPN Putative uncharacterized protein OS=Strep...   107   3e-22
tr|Q877Q8|Q877Q8_CLOTE Putative uncharacterized protein OS=Clost...   105   9e-22
tr|A7DZU9|A7DZU9_CLOSP Hypothetical CTC00065-like protein OS=Clo...   105   9e-22
tr|B1QFN6|B1QFN6_CLOBO Putative uncharacterized protein OS=Clost...   105   1e-21
tr|B1QFL7|B1QFL7_CLOBO Putative uncharacterized protein (Fragmen...   105   1e-21
tr|B1RTR7|B1RTR7_CLOPE Putative uncharacterized protein OS=Clost...   104   2e-21
tr|B1RKU9|B1RKU9_CLOPE Putative uncharacterized protein OS=Clost...   104   2e-21
tr|B1RCB4|B1RCB4_CLOPE Putative uncharacterized protein OS=Clost...   104   2e-21
tr|B1BTI8|B1BTI8_CLOPE Putative uncharacterized protein OS=Clost...   104   2e-21
tr|B1BLN6|B1BLN6_CLOPE Putative uncharacterized protein OS=Clost...   104   2e-21
tr|B1BEX7|B1BEX7_CLOPE Putative uncharacterized protein OS=Clost...   104   2e-21
tr|Q8CQV6|Q8CQV6_STAES Putative uncharacterized protein OS=Staph...   104   2e-21
tr|B5HM15|B5HM15_9ACTO Putative uncharacterized protein OS=Strep...   100   6e-20
tr|B5G7E4|B5G7E4_9ACTO Putative uncharacterized protein OS=Strep...   100   6e-20
tr|B4V362|B4V362_9ACTO Putative uncharacterized protein OS=Strep...   100   6e-20
tr|A5Z309|A5Z309_9FIRM Putative uncharacterized protein OS=Eubac...    99   1e-19
tr|B1C1N3|B1C1N3_9FIRM Putative uncharacterized protein OS=Clost...    94   4e-18
tr|Q1YII0|Q1YII0_MOBAS Putative uncharacterized protein OS=Manga...    90   5e-17
tr|B0A9C5|B0A9C5_9CLOT Putative uncharacterized protein OS=Clost...    90   5e-17
tr|B0A7G5|B0A7G5_9CLOT Putative uncharacterized protein OS=Clost...    90   5e-17

>tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria
           monocytogenes str. 4b H7858 GN=LMOh7858_1903 PE=4 SV=1
          Length = 112

 Score =  142 bits (359), Expect = 6e-33
 Identities = 74/103 (71%), Positives = 80/103 (77%)
 Frame = -3

Query: 322 KAEGSSTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLRITG*SSPRVHIDGKLWHLDV 143
           KA+GS TAR TSRAGTKVGLSDP VP GRA+AQRIK T  ITG S PRVHIDG++WHLDV
Sbjct: 10  KAQGSLTARLTSRAGTKVGLSDPVVPHGRAIAQRIKATPGITGLSPPRVHIDGEVWHLDV 69

Query: 142 GSSPPRGGSTSHRFGLVRPLKRYVSWVQNVARQFGPYPVRALE 14
           GSS P G     +   VRPLKR+ SWVQNV RQFGPYP RA E
Sbjct: 70  GSSHP-GAVVGPKGWAVRPLKRHASWVQNVVRQFGPYPSRAQE 111


>tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein
           OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_01295 PE=4
           SV=1
          Length = 109

 Score =  137 bits (344), Expect = 3e-31
 Identities = 72/101 (71%), Positives = 75/101 (74%)
 Frame = -3

Query: 322 KAEGSSTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLRITG*SSPRVHIDGKLWHLDV 143
           KAEGS TA PT  AGTKVGLSDP V SG A+AQRIK TL ITG S PRVHIDG +WHLDV
Sbjct: 10  KAEGSLTATPTGGAGTKVGLSDPVVLSGNAIAQRIKATLGITGLSLPRVHIDGVVWHLDV 69

Query: 142 GSSPPRGGSTSHRFGLVRPLKRYVSWVQNVARQFGPYPVRA 20
           GSS P G     +   VRPLKRY SWVQNV RQFGPYP  A
Sbjct: 70  GSSHP-GAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPAWA 109


>tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacillus
           megaterium PE=4 SV=1
          Length = 95

 Score =  134 bits (337), Expect = 2e-30
 Identities = 68/92 (73%), Positives = 72/92 (78%)
 Frame = -3

Query: 304 TARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLRITG*SSPRVHIDGKLWHLDVGSSPPR 125
           TAR TSRAGTKVGLSDP VP GRA+AQRIK T  ITG S PRVHIDG++WHLDVGSS P 
Sbjct: 2   TARTTSRAGTKVGLSDPVVPHGRAIAQRIKATPGITGLSPPRVHIDGEVWHLDVGSSHP- 60

Query: 124 GGSTSHRFGLVRPLKRYVSWVQNVARQFGPYP 29
           G     +   VRPLKRY SWVQNV RQFGPYP
Sbjct: 61  GAVVGPKGWAVRPLKRYASWVQNVVRQFGPYP 92


>tr|A5ZYK8|A5ZYK8_9FIRM Putative uncharacterized protein
           OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_04125 PE=4
           SV=1
          Length = 108

 Score =  132 bits (331), Expect = 1e-29
 Identities = 69/101 (68%), Positives = 74/101 (73%)
 Frame = -3

Query: 322 KAEGSSTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLRITG*SSPRVHIDGKLWHLDV 143
           ++ GS TA PT  AGTKVGLSDP V SG A+AQRIK TL ITG S PRVHIDG +WHLDV
Sbjct: 9   QSRGSLTATPTGGAGTKVGLSDPVVLSGNAIAQRIKATLGITGLSLPRVHIDGVVWHLDV 68

Query: 142 GSSPPRGGSTSHRFGLVRPLKRYVSWVQNVARQFGPYPVRA 20
           GSS P G     +   VRPLKRY SWVQNV RQFGPYP  A
Sbjct: 69  GSSHP-GAVVGLKGWAVRPLKRYASWVQNVVRQFGPYPAWA 108


>tr|B6G1S6|B6G1S6_9CLOT Putative uncharacterized protein
           OS=Clostridium hiranonis DSM 13275 GN=CLOHIR_02084 PE=4
           SV=1
          Length = 169

 Score =  115 bits (288), Expect(2) = 1e-25
 Identities = 59/85 (69%), Positives = 65/85 (76%)
 Frame = -3

Query: 274 KVGLSDPTVPSGRAVAQRIKVTLRITG*SSPRVHIDGKLWHLDVGSSPPRGGSTSHRFGL 95
           +VGLSDP V SGRA+AQRIK TL ITG S PRVHIDG++WHLDVGSS P G     +   
Sbjct: 86  EVGLSDPVVLSGRAIAQRIKATLGITGLSPPRVHIDGEVWHLDVGSSHP-GAVVGPKGWA 144

Query: 94  VRPLKRYVSWVQNVARQFGPYPVRA 20
           VRPLK Y SWVQNV RQFGPYP +A
Sbjct: 145 VRPLKWYASWVQNVVRQFGPYPSQA 169



 Score = 24.3 bits (51), Expect(2) = 1e-25
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 323 KGRRELDCETYQ 288
           KG RELDC+TY+
Sbjct: 70  KGIRELDCKTYR 81


>tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein
           OS=Clostridium novyi (strain NT) GN=NT01CX_0152 PE=4
           SV=1
          Length = 213

 Score =  108 bits (269), Expect = 2e-22
 Identities = 50/63 (79%), Positives = 53/63 (84%)
 Frame = +2

Query: 134 RRADIEVPKLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSRAP 313
           RRADIEVP LPVDV+SWGRSACYP  +FYPLSDGPS  N RITK DFRPCST   RS+AP
Sbjct: 2   RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 314 FCL 322
           FCL
Sbjct: 62  FCL 64


>tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein
           OS=Clostridium novyi (strain NT) GN=NT01CX_0251 PE=4
           SV=1
          Length = 213

 Score =  108 bits (269), Expect = 2e-22
 Identities = 50/63 (79%), Positives = 53/63 (84%)
 Frame = +2

Query: 134 RRADIEVPKLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSRAP 313
           RRADIEVP LPVDV+SWGRSACYP  +FYPLSDGPS  N RITK DFRPCST   RS+AP
Sbjct: 2   RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 314 FCL 322
           FCL
Sbjct: 62  FCL 64


>tr|B1BEF3|B1BEF3_CLOBO Putative uncharacterized protein (Fragment)
           OS=Clostridium botulinum C str. Eklund GN=CBC_A1887 PE=4
           SV=1
          Length = 107

 Score =  108 bits (269), Expect = 2e-22
 Identities = 50/63 (79%), Positives = 53/63 (84%)
 Frame = +2

Query: 134 RRADIEVPKLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSRAP 313
           RRADIEVP LPVDV+SWGRSACYP  +FYPLSDGPS  N RITK DFRPCST   RS+AP
Sbjct: 2   RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 314 FCL 322
           FCL
Sbjct: 62  FCL 64


>tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein
           OS=Clostridium botulinum C str. Eklund GN=CBC_A1890 PE=4
           SV=1
          Length = 210

 Score =  108 bits (269), Expect = 2e-22
 Identities = 50/63 (79%), Positives = 53/63 (84%)
 Frame = +2

Query: 134 RRADIEVPKLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSRAP 313
           RRADIEVP LPVDV+SWGRSACYP  +FYPLSDGPS  N RITK DFRPCST   RS+AP
Sbjct: 2   RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 314 FCL 322
           FCL
Sbjct: 62  FCL 64


>tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein
           OS=Clostridium botulinum C str. Eklund GN=CBC_0392 PE=4
           SV=1
          Length = 213

 Score =  108 bits (269), Expect = 2e-22
 Identities = 50/63 (79%), Positives = 53/63 (84%)
 Frame = +2

Query: 134 RRADIEVPKLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSRAP 313
           RRADIEVP LPVDV+SWGRSACYP  +FYPLSDGPS  N RITK DFRPCST   RS+AP
Sbjct: 2   RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 314 FCL 322
           FCL
Sbjct: 62  FCL 64