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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915972
Clone id YMU001_000081_C05
Library
Length 531
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000081_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGCATGATGTATGCATCATCCCCAGCAAAAGTATAATCTCTTTCACAAAAACATTCTATA
CCCGATAATTGGTTGTGATGCTCCTTCGGGTGGACACTGCAAAATCGGTTGTTCCCCGAT
TTTTGCCAGTATCCAAATTTTAATTCCATTCACCCAAAAATATGGCCCCCTCTATTCAAG
GACTTATGTTGAGCATGCACAAGCGGGGGCACCAAACTGCAAGTTTCGAACCTCCATGTC
ACTCGACTGCTTTCTCAGCCGAGCACTGGTGCTTCGCTTTCGCTCAAAGAACAAAGGCAT
TGCCTCCTCCTTTGATACCTCCAGACCACATACATTTTGCAGCTGATCTGCAATCTCAGA
AGCATTAATATGTCGAGCTGCAGAAGTGTGTGCATTTGACATCGAGACTCTAAATTGATC
AACTTTTTGGTACGAATGGTCCAGCACAGAAGCAGGATTCTGCTCCTTCACCCTCCCAAT
AACCTTCGCAGGTCATCCAACAGCAGTTGCAAAGGATGGGATATCACTTAA
■■Homology search results ■■ -
sp_hit_id Q8W2B8
Definition sp|Q8W2B8|SAT4_ARATH Serine acetyltransferase 4 OS=Arabidopsis thaliana
Align length 32
Score (bit) 36.2
E-value 0.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915972|Adiantum capillus-veneris mRNA, clone:
YMU001_000081_C05.
         (531 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8W2B8|SAT4_ARATH Serine acetyltransferase 4 OS=Arabidopsis t...    36   0.10 
sp|Q5THK1|CV030_HUMAN Uncharacterized protein C22orf30 OS=Homo s...    33   0.66 
sp|Q8S895|SAT2_ARATH Serine acetyltransferase 2 OS=Arabidopsis t...    33   0.86 
sp|Q10S58|SAT2_ORYSJ Probable serine acetyltransferase 2 OS=Oryz...    32   1.5  
sp|Q6VY05|DND1_MOUSE Dead end protein homolog 1 OS=Mus musculus ...    31   3.2  
sp|P32003|CYSE_BUCAP Serine acetyltransferase OS=Buchnera aphidi...    31   3.3  
sp|Q55CC2|DHSB_DICDI Succinate dehydrogenase [ubiquinone] iron-s...    31   4.2  
sp|P43886|CYSE_HAEIN Serine acetyltransferase OS=Haemophilus inf...    30   7.3  
sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccha...    30   9.5  

>sp|Q8W2B8|SAT4_ARATH Serine acetyltransferase 4 OS=Arabidopsis
           thaliana GN=SAT4 PE=1 SV=1
          Length = 355

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = -1

Query: 531 LSDIPSFATAVG*PAKVIGRVKEQNPASVLDH 436
           L D+PS +   G PAK+IG V EQ+P+  ++H
Sbjct: 291 LKDVPSHSMVAGNPAKLIGFVDEQDPSMTMEH 322


>sp|Q5THK1|CV030_HUMAN Uncharacterized protein C22orf30 OS=Homo
            sapiens GN=C22orf30 PE=1 SV=1
          Length = 2151

 Score = 33.5 bits (75), Expect = 0.66
 Identities = 22/89 (24%), Positives = 44/89 (49%)
 Frame = -1

Query: 483  VIGRVKEQNPASVLDHSYQKVDQFRVSMSNAHTSAARHINASEIADQLQNVCGLEVSKEE 304
            ++   ++Q    VLD+  QK +++ +    AHT + + I++S + D  QN    +  K+E
Sbjct: 1382 ILNHAEKQQSPEVLDYMLQKEEKY-IRQQKAHTISQQCISSSLLLDDAQNQNQPKADKDE 1440

Query: 303  AMPLFFERKRSTSARLRKQSSDMEVRNLQ 217
            +  +       T A+L K S   + + L+
Sbjct: 1441 STMI----NEITLAKLAKDSIVAQTQKLE 1465


>sp|Q8S895|SAT2_ARATH Serine acetyltransferase 2 OS=Arabidopsis
           thaliana GN=SAT2 PE=1 SV=2
          Length = 323

 Score = 33.1 bits (74), Expect = 0.86
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
 Frame = -1

Query: 531 LSDIPSFATAVG*PAKVIGRVKEQNPASVLDHSYQK------VDQFRVSMSNAHTSAA 376
           L D+PS +   G PAK+I  ++EQ+P+  + H   K       D ++ + SN  + +A
Sbjct: 254 LKDVPSHSVVAGNPAKLIRVMEEQDPSLAMKHDATKEFFRHVADGYKGAQSNGPSLSA 311


>sp|Q10S58|SAT2_ORYSJ Probable serine acetyltransferase 2 OS=Oryza
           sativa subsp. japonica GN=SAT2 PE=2 SV=1
          Length = 354

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -1

Query: 531 LSDIPSFATAVG*PAKVIGRVKEQNPASVLDHSYQK 424
           L D+P  + AVG PAKV+G   +++P+  + H  ++
Sbjct: 298 LKDVPPHSMAVGNPAKVVGYKDKEDPSLTMKHDARR 333


>sp|Q6VY05|DND1_MOUSE Dead end protein homolog 1 OS=Mus musculus
           GN=Dnd1 PE=2 SV=1
          Length = 352

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 29/115 (25%), Positives = 42/115 (36%)
 Frame = +2

Query: 68  IGCDAPSGGHCKIGCSPIFASIQILIPFTQKYGPLYSRTYVEHAQAGAPNCKFRTSMSLD 247
           +G   PSG    IG  P       LIP  Q+ G LY               +FR  M+  
Sbjct: 50  VGSPPPSGSEVYIGRLPQDVYEHQLIPLFQRVGRLY---------------EFRLMMTFS 94

Query: 248 CFLSRALVLRFRSKNKGIASSFDTSRPHTFCS*SAISEALICRAAEVCAFDIETL 412
             L+R       S  +G  ++  T   H         + L+CR+ E C   ++ L
Sbjct: 95  -GLNRGFAYARYSSRRGAQAAIATLHNHQL---RPSCQLLVCRSTEKCELTVDGL 145


>sp|P32003|CYSE_BUCAP Serine acetyltransferase OS=Buchnera
           aphidicola subsp. Schizaphis graminum GN=cysE PE=3 SV=1
          Length = 261

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -1

Query: 531 LSDIPSFATAVG*PAKVIGRVKEQN 457
           L +IP F T VG PAK+I ++K  N
Sbjct: 228 LKNIPPFVTVVGVPAKIIKKIKNSN 252


>sp|Q55CC2|DHSB_DICDI Succinate dehydrogenase [ubiquinone]
           iron-sulfur subunit, mitochondrial OS=Dictyostelium
           discoideum GN=sdhB PE=3 SV=1
          Length = 287

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 517 ILCNCCWMTCEGYWEGEGAESCFCAGPFV 431
           ILC CC  +C  YW  EG +  +  GP V
Sbjct: 197 ILCACCSTSCPSYWWSEGGDGGY-LGPAV 224


>sp|P43886|CYSE_HAEIN Serine acetyltransferase OS=Haemophilus
           influenzae GN=cysE PE=1 SV=1
          Length = 267

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = -1

Query: 531 LSDIPSFATAVG*PAKVIGRVKEQNPASVLDHSYQKVD 418
           L+ +P +ATA G PA+++ + K   PA  ++  +  +D
Sbjct: 223 LNPVPEYATAAGVPARIVSQDKAAKPAFDMNQYFIGID 260


>sp|P25694|CDC48_YEAST Cell division control protein 48
           OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3
          Length = 835

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = -1

Query: 468 KEQNPASVLDHSYQKVDQFRVSMSNAHTSAARHINASEIADQLQNVCGLEVSKEE 304
           +++  A VLD     +D FR ++ N++ SA R      +     +V GL+  KEE
Sbjct: 444 EDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIKEE 498
tr_hit_id B6IP83
Definition tr|B6IP83|B6IP83_RHOCS Serine acetyltransferase OS=Rhodospirillum centenum (strain ATCC 51521 / SW)
Align length 33
Score (bit) 37.7
E-value 0.37
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915972|Adiantum capillus-veneris mRNA, clone:
YMU001_000081_C05.
         (531 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6IP83|B6IP83_RHOCS Serine acetyltransferase OS=Rhodospirillu...    38   0.37 
tr|A9NXF4|A9NXF4_PICSI Putative uncharacterized protein OS=Picea...    36   1.4  
tr|A4S0T9|A4S0T9_OSTLU Serine acetyl transferase OS=Ostreococcus...    36   1.4  
tr|A0Z8J8|A0Z8J8_9GAMM Serine O-acetyltransferase OS=marine gamm...    35   1.8  
tr|A7R6W8|A7R6W8_VITVI Chromosome undetermined scaffold_1460, wh...    35   1.8  
tr|Q7VNA1|Q7VNA1_HAEDU Serine acetyltransferase OS=Haemophilus d...    34   4.1  
tr|Q0RGC6|Q0RGC6_FRAAA Putative transcriptional regulator OS=Fra...    34   5.3  
tr|A4A8J1|A4A8J1_9GAMM Serine acetyltransferase OS=Congregibacte...    34   5.4  
tr|A7R130|A7R130_VITVI Chromosome undetermined scaffold_334, who...    34   5.4  
tr|Q15NG1|Q15NG1_PSEA6 Serine O-acetyltransferase OS=Pseudoalter...    33   7.0  
tr|B8KUU6|B8KUU6_9GAMM Serine O-acetyltransferase OS=gamma prote...    33   7.0  
tr|A7JWU5|A7JWU5_PASHA Serine O-acetyltransferase OS=Mannheimia ...    33   7.0  
tr|A9T958|A9T958_PHYPA Predicted protein (Fragment) OS=Physcomit...    33   7.0  
tr|Q3IHJ6|Q3IHJ6_PSEHT Serine acetyltransferase OS=Pseudoalterom...    33   9.2  
tr|Q3B2Y5|Q3B2Y5_PELLD Serine O-acetyltransferase OS=Pelodictyon...    33   9.2  
tr|B3E7D0|B3E7D0_GEOLS Apolipoprotein N-acyltransferase OS=Geoba...    33   9.2  
tr|B1KQ81|B1KQ81_SHEWM Serine O-acetyltransferase OS=Shewanella ...    33   9.2  
tr|B8F6W6|B8F6W6_HAEPR Serine acetyltransferase OS=Haemophilus p...    33   9.2  
tr|B0QS30|B0QS30_HAEPR Serine acetyltransferase OS=Haemophilus p...    33   9.2  
tr|A8JD52|A8JD52_CHLRE Predicted protein OS=Chlamydomonas reinha...    33   9.2  
tr|Q1RLB1|Q1RLB1_CIOIN Zinc finger protein OS=Ciona intestinalis...    33   9.2  

>tr|B6IP83|B6IP83_RHOCS Serine acetyltransferase OS=Rhodospirillum
           centenum (strain ATCC 51521 / SW) GN=cysE PE=4 SV=1
          Length = 277

 Score = 37.7 bits (86), Expect = 0.37
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -1

Query: 531 LSDIPSFATAVG*PAKVIGRVKEQNPASVLDHS 433
           L  +P+FAT  G PA+++GR  ++ PA  +DHS
Sbjct: 232 LHPVPAFATVAGVPARLVGRRSDEVPARTMDHS 264


>tr|A9NXF4|A9NXF4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 498

 Score = 35.8 bits (81), Expect = 1.4
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = -1

Query: 531 LSDIPSFATAVG*PAKVIGRVKEQNPASVLDHSYQK 424
           L DIP  +   G PA VIG ++EQNPA  + H   K
Sbjct: 446 LKDIPPHSMVAGTPANVIGFLEEQNPALTMKHDATK 481


>tr|A4S0T9|A4S0T9_OSTLU Serine acetyl transferase OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=SAT1 PE=4 SV=1
          Length = 374

 Score = 35.8 bits (81), Expect = 1.4
 Identities = 19/40 (47%), Positives = 23/40 (57%)
 Frame = -1

Query: 531 LSDIPSFATAVG*PAKVIGRVKEQNPASVLDHSYQKVDQF 412
           L DIP  +TAVG PAKVI R   Q P+  +D +    D F
Sbjct: 334 LDDIPEGSTAVGIPAKVINRGAPQQPSLSMDQTSYITDYF 373


>tr|A0Z8J8|A0Z8J8_9GAMM Serine O-acetyltransferase OS=marine gamma
           proteobacterium HTCC2080 GN=MGP2080_04475 PE=4 SV=1
          Length = 278

 Score = 35.4 bits (80), Expect = 1.8
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -1

Query: 531 LSDIPSFATAVG*PAKVIGRVKEQNPASVLDHSYQKVD 418
           L D+PS  T  G PAKV+G    + PA  +DH+  + D
Sbjct: 240 LHDVPSHTTVAGVPAKVVGVPDSETPALDMDHALPESD 277


>tr|A7R6W8|A7R6W8_VITVI Chromosome undetermined scaffold_1460, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00008446001 PE=4 SV=1
          Length = 261

 Score = 35.4 bits (80), Expect = 1.8
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -1

Query: 531 LSDIPSFATAVG*PAKVIGRVKEQNPASVLDHSYQKVDQFRVSMSNAHT 385
           L D+P  +   G PA++IG V EQ+P+  + H   K D F  +M    T
Sbjct: 210 LKDVPPHSMVAGIPARLIGHVHEQDPSLTMKHDATK-DYFEHAMDGQST 257


>tr|Q7VNA1|Q7VNA1_HAEDU Serine acetyltransferase OS=Haemophilus
           ducreyi GN=cysE PE=4 SV=1
          Length = 271

 Score = 34.3 bits (77), Expect = 4.1
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -1

Query: 531 LSDIPSFATAVG*PAKVIGRVKEQNPASVLDHSYQKVD 418
           L  +P   TA G PA++IGR  +Q PA  ++  +++++
Sbjct: 227 LQAVPDHTTAAGIPARIIGRAPQQKPAFDMNQYFEEIE 264


>tr|Q0RGC6|Q0RGC6_FRAAA Putative transcriptional regulator
           OS=Frankia alni (strain ACN14a) GN=FRAAL4821 PE=4 SV=1
          Length = 213

 Score = 33.9 bits (76), Expect = 5.3
 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
 Frame = +2

Query: 77  DAPSGGHCKIGCSPIFASIQILIPFTQKYGP--LYSRTYVEHAQAGAPNCKFRTSMSLDC 250
           DAP+ G  +I   P      + +P T++ G    Y   Y  H+ AG P+ +         
Sbjct: 85  DAPATGDPRIHPRPTVRDGVVFLPMTRRPGGPRAYKMVYPAHSPAGPPDQRVHEGYEWLY 144

Query: 251 FLSRALVLRFRSKN----KGIASSFDTSRPHTF 337
            LS  L L     +     G A+ FDT  PH F
Sbjct: 145 VLSGRLRLVLGEHDLLLGPGEAAEFDTRTPHWF 177


>tr|A4A8J1|A4A8J1_9GAMM Serine acetyltransferase OS=Congregibacter
           litoralis KT71 GN=KT71_03720 PE=4 SV=1
          Length = 266

 Score = 33.9 bits (76), Expect = 5.4
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -1

Query: 531 LSDIPSFATAVG*PAKVIGRVKEQNPASVLDHSYQKVD 418
           L  +P   T  G PAKV+G+     PA  +DHS+   D
Sbjct: 228 LEPVPPHTTVAGVPAKVVGKPNSDQPALDMDHSWPCCD 265


>tr|A7R130|A7R130_VITVI Chromosome undetermined scaffold_334, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00011752001 PE=4 SV=1
          Length = 307

 Score = 33.9 bits (76), Expect = 5.4
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 531 LSDIPSFATAVG*PAKVIGRVKEQNPASVLDHSYQK 424
           L D+P  +   G PA++IG V EQ+P+  + H   K
Sbjct: 256 LKDVPPHSMVAGIPARLIGHVHEQDPSLTMKHGTSK 291


>tr|Q15NG1|Q15NG1_PSEA6 Serine O-acetyltransferase
           OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087)
           GN=Patl_4078 PE=4 SV=1
          Length = 259

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 531 LSDIPSFATAVG*PAKVIGRVKEQNPASVL 442
           L+D+PS  T  G PAK++G+   QNP   +
Sbjct: 223 LADVPSHVTVAGVPAKIVGKPSCQNPCQTM 252