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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915973
Clone id YMU001_000081_C06
Library
Length 192
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000081_C06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CAGGAACCATGGGAACTTGAAGAAGAGGATACCATATCAGGTGAAAGAGAGCGGTGGGTG
GTCGATTACGGCGATCCAGCTACAGTGTGTTGTGTAGGGGAAAGCGCTGGAGCCACTATT
TTACATTTATGTTGCGCCCAAAAATGGTGAAGCATGAATGGAATCCCCTCAATATACGGG
GGCTCATATTTG
■■Homology search results ■■ -
sp_hit_id Q44315
Definition sp|Q44315|TREY_ARTSQ Maltooligosyl trehalose synthase OS=Arthrobacter sp. (strain Q36)
Align length 22
Score (bit) 30.0
E-value 3.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915973|Adiantum capillus-veneris mRNA, clone:
YMU001_000081_C06.
         (192 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q44315|TREY_ARTSQ Maltooligosyl trehalose synthase OS=Arthrob...    30   3.8  
sp|A6WW98|SYGA_OCHA4 Glycyl-tRNA synthetase alpha subunit OS=Och...    29   6.5  
sp|Q8G2C1|SYGA_BRUSU Glycyl-tRNA synthetase alpha subunit OS=Bru...    29   6.5  
sp|B0CK89|SYGA_BRUSI Glycyl-tRNA synthetase alpha subunit OS=Bru...    29   6.5  
sp|Q8YFJ0|SYGA_BRUME Glycyl-tRNA synthetase alpha subunit OS=Bru...    29   6.5  
sp|A9M8H7|SYGA_BRUC2 Glycyl-tRNA synthetase alpha subunit OS=Bru...    29   6.5  
sp|Q57EW2|SYGA_BRUAB Glycyl-tRNA synthetase alpha subunit OS=Bru...    29   6.5  
sp|Q2YME4|SYGA_BRUA2 Glycyl-tRNA synthetase alpha subunit OS=Bru...    29   6.5  

>sp|Q44315|TREY_ARTSQ Maltooligosyl trehalose synthase
           OS=Arthrobacter sp. (strain Q36) GN=treY PE=1 SV=1
          Length = 775

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 17  LKKRIPYQVKESGGWSITAIQL 82
           L  R+PY +++SGGW  TA++L
Sbjct: 714 LATRLPYGLEQSGGWRDTAVEL 735


>sp|A6WW98|SYGA_OCHA4 Glycyl-tRNA synthetase alpha subunit
           OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
           NCTC 12168) GN=glyQ PE=3 SV=1
          Length = 311

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 170 EGIPFMLHHFWAQHKCKIVAP 108
           +G+   LH++WA+H C I+ P
Sbjct: 8   QGLILTLHNYWAEHGCAILQP 28


>sp|Q8G2C1|SYGA_BRUSU Glycyl-tRNA synthetase alpha subunit
           OS=Brucella suis GN=glyQ PE=3 SV=1
          Length = 308

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 170 EGIPFMLHHFWAQHKCKIVAP 108
           +G+   LH++WA+H C I+ P
Sbjct: 8   QGLILTLHNYWAEHGCAILQP 28


>sp|B0CK89|SYGA_BRUSI Glycyl-tRNA synthetase alpha subunit
           OS=Brucella suis (strain ATCC 23445 / NCTC 10510)
           GN=glyQ PE=3 SV=1
          Length = 308

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 170 EGIPFMLHHFWAQHKCKIVAP 108
           +G+   LH++WA+H C I+ P
Sbjct: 8   QGLILTLHNYWAEHGCAILQP 28


>sp|Q8YFJ0|SYGA_BRUME Glycyl-tRNA synthetase alpha subunit
           OS=Brucella melitensis GN=glyQ PE=3 SV=2
          Length = 308

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 170 EGIPFMLHHFWAQHKCKIVAP 108
           +G+   LH++WA+H C I+ P
Sbjct: 8   QGLILTLHNYWAEHGCAILQP 28


>sp|A9M8H7|SYGA_BRUC2 Glycyl-tRNA synthetase alpha subunit
           OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
           GN=glyQ PE=3 SV=1
          Length = 308

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 170 EGIPFMLHHFWAQHKCKIVAP 108
           +G+   LH++WA+H C I+ P
Sbjct: 8   QGLILTLHNYWAEHGCAILQP 28


>sp|Q57EW2|SYGA_BRUAB Glycyl-tRNA synthetase alpha subunit
           OS=Brucella abortus GN=glyQ PE=3 SV=1
          Length = 308

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 170 EGIPFMLHHFWAQHKCKIVAP 108
           +G+   LH++WA+H C I+ P
Sbjct: 8   QGLILTLHNYWAEHGCAILQP 28


>sp|Q2YME4|SYGA_BRUA2 Glycyl-tRNA synthetase alpha subunit
           OS=Brucella abortus (strain 2308) GN=glyQ PE=3 SV=1
          Length = 308

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 170 EGIPFMLHHFWAQHKCKIVAP 108
           +G+   LH++WA+H C I+ P
Sbjct: 8   QGLILTLHNYWAEHGCAILQP 28
tr_hit_id B6T2X8
Definition tr|B6T2X8|B6T2X8_MAIZE Gibberellin receptor GID1L2 OS=Zea mays
Align length 31
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915973|Adiantum capillus-veneris mRNA, clone:
YMU001_000081_C06.
         (192 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6T2X8|B6T2X8_MAIZE Gibberellin receptor GID1L2 OS=Zea mays P...    35   1.9  
tr|B4FRL3|B4FRL3_MAIZE Putative uncharacterized protein OS=Zea m...    35   1.9  
tr|Q8LG06|Q8LG06_ARATH Putative uncharacterized protein OS=Arabi...    34   4.2  
tr|Q6ZIJ0|Q6ZIJ0_ORYSJ Putative cell death associated protein OS...    34   4.2  
tr|Q6ZDG6|Q6ZDG6_ORYSJ Putative PrMC3 OS=Oryza sativa subsp. jap...    34   4.2  
tr|Q0J519|Q0J519_ORYSJ Os08g0475000 protein OS=Oryza sativa subs...    34   4.2  
tr|B8B6E9|B8B6E9_ORYSI Putative uncharacterized protein OS=Oryza...    34   4.2  
tr|A3BU28|A3BU28_ORYSJ Putative uncharacterized protein OS=Oryza...    34   4.2  
tr|A2YW73|A2YW73_ORYSI Putative uncharacterized protein OS=Oryza...    34   4.2  
tr|Q67J05|Q67J05_ORYSJ Os09g0460700 protein OS=Oryza sativa subs...    33   7.1  
tr|A3BJL6|A3BJL6_ORYSJ Putative uncharacterized protein OS=Oryza...    33   7.1  
tr|A2YL54|A2YL54_ORYSI Putative uncharacterized protein OS=Oryza...    33   7.1  
tr|B2AMD5|B2AMD5_PODAN Predicted CDS Pa_5_7070 OS=Podospora anse...    33   7.1  
tr|B8DTK9|B8DTK9_BIFAN Carboxylesterase, type B OS=Bifidobacteri...    33   9.3  
tr|B2ECK9|B2ECK9_BIFAN Probable esterase OS=Bifidobacterium anim...    33   9.3  
tr|Q69PF3|Q69PF3_ORYSJ Putative PrMC3 OS=Oryza sativa subsp. jap...    33   9.3  
tr|A3BZ59|A3BZ59_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.3  
tr|A2Z1L1|A2Z1L1_ORYSI Putative uncharacterized protein OS=Oryza...    33   9.3  

>tr|B6T2X8|B6T2X8_MAIZE Gibberellin receptor GID1L2 OS=Zea mays PE=2
           SV=1
          Length = 310

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +1

Query: 34  ISGERERWVVDYGDPATVCCVGESAGATILH 126
           ++  ++ W+V++GD A +   G+SAGA I+H
Sbjct: 135 VTSAQDEWIVEHGDTARLFLAGDSAGANIVH 165


>tr|B4FRL3|B4FRL3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 371

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +1

Query: 34  ISGERERWVVDYGDPATVCCVGESAGATILH 126
           ++  ++ W+V++GD A +   G+SAGA I+H
Sbjct: 196 VTSAQDEWIVEHGDTARLFLAGDSAGANIVH 226


>tr|Q8LG06|Q8LG06_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 314

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 28  DTISGERERWVVDYGDPATVCCVGESAGATILH 126
           +TI    E W+ DY D  ++  VG+SAGA I H
Sbjct: 133 NTIQAINEPWINDYADLDSIFLVGDSAGANISH 165


>tr|Q6ZIJ0|Q6ZIJ0_ORYSJ Putative cell death associated protein
           OS=Oryza sativa subsp. japonica GN=OJ1112_F06.11 PE=4
           SV=1
          Length = 448

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +1

Query: 55  WVVDYGDPATVCCVGESAGATILHLCCAQ 141
           WV  Y DP  +   GESAGATI H   A+
Sbjct: 164 WVARYADPTRLFLAGESAGATIAHNVAAR 192


>tr|Q6ZDG6|Q6ZDG6_ORYSJ Putative PrMC3 OS=Oryza sativa subsp.
           japonica GN=P0451G12.19 PE=4 SV=1
          Length = 329

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 37  SGERERWVVDYGDPATVCCVGESAGATILH 126
           SG  E W+ ++GD A +   G+SAGA I H
Sbjct: 142 SGGPEPWLAEHGDAARIFVAGDSAGANIAH 171


>tr|Q0J519|Q0J519_ORYSJ Os08g0475000 protein OS=Oryza sativa subsp.
           japonica GN=Os08g0475000 PE=4 SV=1
          Length = 379

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 37  SGERERWVVDYGDPATVCCVGESAGATILH 126
           SG  E W+ ++GD A +   G+SAGA I H
Sbjct: 192 SGGPEPWLAEHGDAARIFVAGDSAGANIAH 221


>tr|B8B6E9|B8B6E9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26116 PE=4 SV=1
          Length = 425

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +1

Query: 55  WVVDYGDPATVCCVGESAGATILHLCCAQ 141
           WV  Y DP  +   GESAGATI H   A+
Sbjct: 141 WVARYADPTRLFLAGESAGATIAHNVAAR 169


>tr|A3BU28|A3BU28_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_026550 PE=4 SV=1
          Length = 259

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 37  SGERERWVVDYGDPATVCCVGESAGATILH 126
           SG  E W+ ++GD A +   G+SAGA I H
Sbjct: 72  SGGPEPWLAEHGDAARIFVAGDSAGANIAH 101


>tr|A2YW73|A2YW73_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_29583 PE=4 SV=1
          Length = 329

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 37  SGERERWVVDYGDPATVCCVGESAGATILH 126
           SG  E W+ ++GD A +   G+SAGA I H
Sbjct: 142 SGGPEPWLAEHGDAARIFVAGDSAGANIAH 171


>tr|Q67J05|Q67J05_ORYSJ Os09g0460700 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0054F02.30 PE=2 SV=1
          Length = 312

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 34  ISGERERWVVDYGDPATVCCVGESAGATILH 126
           +S   + W+ ++GD A V   G+SAG  I+H
Sbjct: 137 VSAHADDWITEHGDTARVFVAGDSAGGNIVH 167