BP915992 |
Clone id |
YMU001_000081_F02 |
Library |
YMU01 |
Length |
464 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000081_F02. |
Accession |
BP915992 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGGAAAAAAAGAACTTAAGATACTGAAACTTTTTAACACTCTTTCAGTCTTTGTGTGTCC CCTTAAAGGATTAGAATTAACACATTTCCTAGACAAAAGTTGCACGTCTCAATGTGTGCG ACACCTGCACACCATGGCAGCCTTTACTGTATTAGAGTAGTCCCAATCCACAATGCATCT ACAAGAACCACCAAATGCCTGGATAGAGACTTGGTAATCAAAGTGCCAACAAAGGATTTA CAAGGTTCAAAACAAATGAACACAAAATGATCCGACGATATCACACCATGCGTATAAGAA TCATCAATGACTGACACAGCCAATGAAGAGATGGATAGTAGGGTGGGGGTGATATCTTCA AGATTGAAATTCAGGGAGACCCCAATAGGATGGTTCAAAATCCAAAATCGAACCTAGAAT CTGATCTGCACCCTCACATAGAGATCGATCCAAGTTGGGATCCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q94529 |
Definition |
sp|Q94529|GS1_DROME GS1-like protein OS=Drosophila melanogaster |
Align length |
32 |
Score (bit) |
33.5 |
E-value |
0.46 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8L8P9 |
Definition |
tr|Q8L8P9|Q8L8P9_ARATH GS1-like protein OS=Arabidopsis thaliana |
Align length |
33 |
Score (bit) |
52.0 |
E-value |
1.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915992|Adiantum capillus-veneris mRNA, clone: YMU001_000081_F02. (464 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8L8P9|Q8L8P9_ARATH GS1-like protein OS=Arabidopsis thaliana ... 52 1e-05 tr|Q49SB5|Q49SB5_BRAJU Putative hydrolase (Fragment) OS=Brassica... 51 2e-05 tr|Q9SW01|Q9SW01_ARATH Putative uncharacterized protein AT4g2584... 49 1e-04 tr|Q8GW23|Q8GW23_ARATH Putative uncharacterized protein At4g2584... 49 1e-04 tr|A9TYI8|A9TYI8_PHYPA Predicted protein OS=Physcomitrella paten... 48 2e-04 tr|B6THA2|B6THA2_MAIZE Haloacid dehalogenase-like hydrolase doma... 48 3e-04 tr|B4FTM3|B4FTM3_MAIZE Putative uncharacterized protein OS=Zea m... 48 3e-04 tr|B7FHV4|B7FHV4_MEDTR Putative uncharacterized protein OS=Medic... 47 5e-04 tr|B6E208|B6E208_ELAGV Putative HAD superfamily hydrolase OS=Ela... 46 8e-04 tr|A7Q6E1|A7Q6E1_VITVI Chromosome chr11 scaffold_56, whole genom... 46 8e-04 tr|B4FM45|B4FM45_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.002 tr|Q7XXR4|Q7XXR4_ORYSJ Os08g0243600 protein OS=Oryza sativa subs... 44 0.004 tr|B8BC92|B8BC92_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.004 tr|A3BR24|A3BR24_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.004 tr|Q9FKM6|Q9FKM6_ARATH GS1-like protein OS=Arabidopsis thaliana ... 42 0.020 tr|Q8VZP1|Q8VZP1_ARATH Putative GS1 protein OS=Arabidopsis thali... 42 0.020 tr|B5VY39|B5VY39_SPIMA HAD-superfamily hydrolase, subfamily IA, ... 40 0.057 tr|B6NND2|B6NND2_BRAFL Putative uncharacterized protein (Fragmen... 40 0.057 tr|Q118F7|Q118F7_TRIEI HAD-superfamily hydrolase, subfamily IA, ... 40 0.075 tr|B6P1Y8|B6P1Y8_BRAFL Putative uncharacterized protein OS=Branc... 40 0.075 tr|B6NND4|B6NND4_BRAFL Putative uncharacterized protein (Fragmen... 40 0.075 tr|B6NND1|B6NND1_BRAFL Putative uncharacterized protein OS=Branc... 40 0.075 tr|A7SM45|A7SM45_NEMVE Predicted protein OS=Nematostella vectens... 39 0.13 tr|B4QA79|B4QA79_DROSI GD22707 OS=Drosophila simulans GN=GD22707... 36 1.1 tr|B4NYL0|B4NYL0_DROYA GE14717 OS=Drosophila yakuba GN=GE14717 P... 36 1.1 tr|B4I397|B4I397_DROSE GM18089 OS=Drosophila sechellia GN=GM1808... 36 1.1 tr|B3N3S9|B3N3S9_DROER GG24373 OS=Drosophila erecta GN=GG24373 P... 36 1.1 tr|Q4P3M7|Q4P3M7_USTMA Putative uncharacterized protein OS=Ustil... 36 1.1 tr|Q29LK4|Q29LK4_DROPS GA13732 OS=Drosophila pseudoobscura pseud... 35 1.4 tr|B4GPT8|B4GPT8_DROPE GL15404 OS=Drosophila persimilis GN=GL154... 35 1.4
>tr|Q8L8P9|Q8L8P9_ARATH GS1-like protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 298
Score = 52.0 bits (123), Expect = 1e-05 Identities = 21/33 (63%), Positives = 25/33 (75%) Frame = -3
Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364 DP LD+S C ADQ+L S+LDF+P WGLP FQ Sbjct: 262 DPRLDKSYCNVADQVLASLLDFKPEEWGLPSFQ 294
>tr|Q49SB5|Q49SB5_BRAJU Putative hydrolase (Fragment) OS=Brassica juncea GN=Hdlase1 PE=2 SV=1 Length = 139
Score = 51.2 bits (121), Expect = 2e-05 Identities = 20/33 (60%), Positives = 26/33 (78%) Frame = -3
Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364 DP LD+S C+ ADQ+L S+LDF+P WGLP F+ Sbjct: 103 DPRLDKSYCDVADQVLASLLDFKPEEWGLPPFE 135
>tr|Q9SW01|Q9SW01_ARATH Putative uncharacterized protein AT4g25840 OS=Arabidopsis thaliana GN=AT4g25840 PE=2 SV=1 Length = 221
Score = 48.9 bits (115), Expect = 1e-04 Identities = 20/33 (60%), Positives = 24/33 (72%) Frame = -3
Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364 D LD+S C ADQ+L S+LDF+P WGLP FQ Sbjct: 185 DSRLDKSYCNVADQVLASLLDFKPEEWGLPSFQ 217
>tr|Q8GW23|Q8GW23_ARATH Putative uncharacterized protein At4g25840/F14M19_120 (At4g25840) OS=Arabidopsis thaliana GN=At4g25840/F14M19_120 PE=2 SV=1 Length = 249
Score = 48.9 bits (115), Expect = 1e-04 Identities = 20/33 (60%), Positives = 24/33 (72%) Frame = -3
Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364 D LD+S C ADQ+L S+LDF+P WGLP FQ Sbjct: 213 DSRLDKSYCNVADQVLASLLDFKPEEWGLPSFQ 245
>tr|A9TYI8|A9TYI8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172694 PE=4 SV=1 Length = 239
Score = 48.1 bits (113), Expect = 2e-04 Identities = 19/34 (55%), Positives = 27/34 (79%) Frame = -3
Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQS 361 DPNLD++LC+ ADQ+LGS+ +F+ + WGLP S Sbjct: 204 DPNLDKALCQEADQVLGSLDEFDYAQWGLPSIPS 237
>tr|B6THA2|B6THA2_MAIZE Haloacid dehalogenase-like hydrolase domain-containing protein 1A OS=Zea mays PE=2 SV=1 Length = 241
Score = 47.8 bits (112), Expect = 3e-04 Identities = 20/33 (60%), Positives = 26/33 (78%) Frame = -3
Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364 DP LD S +GADQ+L S+LDF+P+ WGLP F+ Sbjct: 208 DPRLDVSYHKGADQVLSSLLDFKPAEWGLPAFK 240
>tr|B4FTM3|B4FTM3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 277
Score = 47.8 bits (112), Expect = 3e-04 Identities = 20/33 (60%), Positives = 26/33 (78%) Frame = -3
Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364 DP LD S +GADQ+L S+LDF+P+ WGLP F+ Sbjct: 244 DPRLDVSYHKGADQVLSSLLDFKPAEWGLPAFK 276
>tr|B7FHV4|B7FHV4_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 241
Score = 47.0 bits (110), Expect = 5e-04 Identities = 19/33 (57%), Positives = 24/33 (72%) Frame = -3
Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364 DP LD+S + ADQ+L S+LDF PS W LP F+ Sbjct: 205 DPRLDKSFQDAADQVLNSLLDFNPSEWSLPPFE 237
>tr|B6E208|B6E208_ELAGV Putative HAD superfamily hydrolase OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 244
Score = 46.2 bits (108), Expect = 8e-04 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = -3
Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364 DP LD S + ADQ+L S+LDF+PS WGLP F+ Sbjct: 208 DPRLDVSYHKEADQVLSSLLDFKPSEWGLPPFE 240
>tr|A7Q6E1|A7Q6E1_VITVI Chromosome chr11 scaffold_56, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00031358001 PE=4 SV=1 Length = 234
Score = 46.2 bits (108), Expect = 8e-04 Identities = 20/32 (62%), Positives = 23/32 (71%) Frame = -3
Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEF 367 DP LD S E ADQ+L S+LDF P+ WGLP F Sbjct: 198 DPRLDISFHEAADQVLSSLLDFNPNDWGLPPF 229
|