BP916001
Clone id YMU001_000081_G03
Library
Length 478
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000081_G03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAGTACCTGCGAGAGAGAGAGAGAAAAAGAGCATGCTGGGCTAAGGAACTTTCCTTGAAT
TTCTAGTGTGTGTGTGCCCAAAATGTGTGCTCTTAGGCATCTTATGCCTGATTTGCAGCT
TATCCTATAAGCATACAAGAATCTTTCTGTATGACGCTCTCATCAAGAGAGGCAACATAA
AACACAATTCAAATCTTGACCATCTACCGTGTATGGGTCGTGATTGTAGGAGGATGACTT
GAATAGGACACTTTGTCGGTGAATCTAGTCAAAATTTTAGGTTCTTTTTAGTGTTGTTGT
GTGTTGATAGCAACCAACAATCATATTAACAATCCATTCTTAGTCTGTCCTTGACAGAGC
TGCGAGTGTGATAGCGGAAGCGTAATGCATGAAGCGGTAGAATCAAATCCATCGCCCTAG
CATGCTTTGCATGCAGAATTGTAAGCCCGTGCGAAGAGTGATGGCCTCAACGTGAGAA
■■Homology search results ■■ -
sp_hit_id Q55CY9
Definition sp|Q55CY9|GDT8_DICDI Probable serine/threonine-protein kinase gdt8 OS=Dictyostelium discoideum
Align length 65
Score (bit) 29.3
E-value 9.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916001|Adiantum capillus-veneris mRNA, clone:
YMU001_000081_G03.
(478 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q55CY9|GDT8_DICDI Probable serine/threonine-protein kinase gd... 29 9.6

>sp|Q55CY9|GDT8_DICDI Probable serine/threonine-protein kinase gdt8
OS=Dictyostelium discoideum GN=gdt8 PE=3 SV=1
Length = 1326

Score = 29.3 bits (64), Expect = 9.6
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = -1

Query: 265 DSPTKCPIQVILLQSRPIH----GRWSRFELCFMLPLLMRASYR---KILVCL*DKLQIR 107
D+PT+ P Q +L S+PI R EL LP+ + + I++C+ K+Q
Sbjct: 751 DTPTQTPTQTPILTSKPITQISVDRNENLELKIALPICLSLALLIGIIIMICIFKKVQSN 810

Query: 106 HKMPK 92
K+ K
Sbjct: 811 SKLKK 815


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916001|Adiantum capillus-veneris mRNA, clone:
YMU001_000081_G03.
(478 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******