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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916004
Clone id YMU001_000081_G10
Library
Length 308
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000081_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AACGCGCCGTTATCTTGAGATGTTCTACATTCTGAAGTACAGAGATCTGGTGAAGACAGT
ACCAATTGCAATTGAAGAGACACATGCCACGGATGAGCAAGCTAAGGCGAAAATTGCAGA
AAATGCTGTGTAGAAACGTTCTTGTTTATCATATCTTACCAATAAAAGCTGGTGGTACGG
GCAATAAGAGTAGAGTTTGAGATCGCTCTGGCACACGATCTCTTCCAAGCAAATAAGCCA
TCCATTGTAATAAAATTGGATTGTAAGGTCACTCTACAAACGTTTCGCCCTTCTGTGATT
TGTACAAG
■■Homology search results ■■ -
sp_hit_id Q42652
Definition sp|Q42652|SUSY_BETVU Sucrose synthase (Fragment) OS=Beta vulgaris
Align length 32
Score (bit) 46.2
E-value 5.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916004|Adiantum capillus-veneris mRNA, clone:
YMU001_000081_G10.
         (308 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q42652|SUSY_BETVU Sucrose synthase (Fragment) OS=Beta vulgari...    46   5e-05
sp|Q41608|SUS1_TULGE Sucrose synthase 1 OS=Tulipa gesneriana PE=...    44   2e-04
sp|P31926|SUSY_VICFA Sucrose synthase OS=Vicia faba GN=SUCS PE=2...    43   4e-04
sp|O24301|SUS2_PEA Sucrose synthase 2 OS=Pisum sativum GN=SUS2 P...    43   4e-04
sp|Q41607|SUS2_TULGE Sucrose synthase 2 OS=Tulipa gesneriana PE=...    43   6e-04
sp|Q00917|SUS2_ARATH Sucrose synthase 2 OS=Arabidopsis thaliana ...    42   0.001
sp|Q01390|SUSY_PHAAU Sucrose synthase OS=Phaseolus aureus GN=SS1...    41   0.002
sp|O65026|SUSY_MEDSA Sucrose synthase OS=Medicago sativa PE=2 SV=1     41   0.002
sp|Q43009|SUS3_ORYSJ Sucrose synthase 3 OS=Oryza sativa subsp. j...    41   0.002
sp|P31924|SUS2_ORYSJ Sucrose synthase 2 OS=Oryza sativa subsp. j...    41   0.002
sp|P49036|SUS2_MAIZE Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1...    41   0.002
sp|P31922|SUS1_HORVU Sucrose synthase 1 OS=Hordeum vulgare GN=SS...    41   0.002
sp|P49034|SUSY_ALNGL Sucrose synthase OS=Alnus glutinosa GN=SUS1...    40   0.003
sp|P31923|SUS2_HORVU Sucrose synthase 2 OS=Hordeum vulgare GN=SS...    40   0.003
sp|P30298|SUS1_ORYSJ Sucrose synthase 1 OS=Oryza sativa subsp. j...    40   0.003
sp|P13708|SUSY_SOYBN Sucrose synthase OS=Glycine max GN=SS PE=1 ...    40   0.005
sp|P49035|SUS1_DAUCA Sucrose synthase isoform 1 OS=Daucus carota...    39   0.006
sp|P49039|SUS2_SOLTU Sucrose synthase OS=Solanum tuberosum PE=3 ...    39   0.011
sp|P49037|SUSY_SOLLC Sucrose synthase OS=Solanum lycopersicum PE...    38   0.014
sp|P10691|SUS1_SOLTU Sucrose synthase OS=Solanum tuberosum PE=2 ...    38   0.014
sp|P04712|SUS1_MAIZE Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2...    38   0.018
sp|O49845|SUS2_DAUCA Sucrose synthase isoform 2 OS=Daucus carota...    37   0.031
sp|P49040|SUS1_ARATH Sucrose synthase 1 OS=Arabidopsis thaliana ...    32   0.76 
sp|Q9CI75|PYRG_LACLA CTP synthase OS=Lactococcus lactis subsp. l...    30   3.8  
sp|Q9V2G3|RFCL_PYRAB Replication factor C large subunit OS=Pyroc...    30   4.9  
sp|Q09854|MOK11_SCHPO Cell wall alpha-1,3-glucan synthase mok11 ...    30   4.9  

>sp|Q42652|SUSY_BETVU Sucrose synthase (Fragment) OS=Beta vulgaris
           GN=SS1 PE=2 SV=1
          Length = 766

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIEETHATDE 97
           TRRYLEMFYILK+RDL  +VP+A +E  +T +
Sbjct: 727 TRRYLEMFYILKFRDLANSVPLATDEEPSTTD 758


>sp|Q41608|SUS1_TULGE Sucrose synthase 1 OS=Tulipa gesneriana PE=2
           SV=1
          Length = 805

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIE 76
           TRRYLEMFY LKYR+L K+VP+AI+
Sbjct: 780 TRRYLEMFYALKYRNLAKSVPLAID 804


>sp|P31926|SUSY_VICFA Sucrose synthase OS=Vicia faba GN=SUCS PE=2
           SV=1
          Length = 806

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIEE 79
           +RRYLEMFY LKYR L ++VP+A+EE
Sbjct: 781 SRRYLEMFYALKYRKLAESVPLAVEE 806


>sp|O24301|SUS2_PEA Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2
           SV=1
          Length = 809

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIA 70
           TRRYLEMFYILK+RDL  +VPIA
Sbjct: 785 TRRYLEMFYILKFRDLANSVPIA 807


>sp|Q41607|SUS2_TULGE Sucrose synthase 2 OS=Tulipa gesneriana PE=2
           SV=1
          Length = 820

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 17/25 (68%), Positives = 23/25 (92%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIE 76
           T+RYLEMFY LKYR+L K+VP+A++
Sbjct: 782 TKRYLEMFYALKYRNLAKSVPLAVD 806


>sp|Q00917|SUS2_ARATH Sucrose synthase 2 OS=Arabidopsis thaliana
           GN=At5g49190 PE=2 SV=2
          Length = 805

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIEE 79
           TRRYLEMFY LK+RDL  ++P+A +E
Sbjct: 779 TRRYLEMFYSLKFRDLANSIPLATDE 804


>sp|Q01390|SUSY_PHAAU Sucrose synthase OS=Phaseolus aureus GN=SS1
           PE=1 SV=1
          Length = 805

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 17/25 (68%), Positives = 22/25 (88%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIE 76
           +RRYLEMFY LKYR L ++VP+A+E
Sbjct: 781 SRRYLEMFYALKYRKLAESVPLAVE 805


>sp|O65026|SUSY_MEDSA Sucrose synthase OS=Medicago sativa PE=2 SV=1
          Length = 805

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 17/25 (68%), Positives = 22/25 (88%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIE 76
           +RRYLEMFY LKYR L ++VP+A+E
Sbjct: 781 SRRYLEMFYALKYRKLAESVPLAVE 805


>sp|Q43009|SUS3_ORYSJ Sucrose synthase 3 OS=Oryza sativa subsp.
           japonica GN=SS3 PE=3 SV=2
          Length = 816

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIEETHAT 91
           TRRYLEM Y LKYR +  TVP+AIE   +T
Sbjct: 786 TRRYLEMLYALKYRKMATTVPLAIEGEAST 815


>sp|P31924|SUS2_ORYSJ Sucrose synthase 2 OS=Oryza sativa subsp.
           japonica GN=SS2 PE=3 SV=1
          Length = 816

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIE 76
           TRRYLEM Y LKYR +  TVP+A+E
Sbjct: 786 TRRYLEMLYALKYRTMASTVPLAVE 810
tr_hit_id A9NRB7
Definition tr|A9NRB7|A9NRB7_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 27
Score (bit) 52.4
E-value 1.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916004|Adiantum capillus-veneris mRNA, clone:
YMU001_000081_G10.
         (308 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NRB7|A9NRB7_PICSI Putative uncharacterized protein OS=Picea...    52   1e-05
tr|A6N837|A6N837_PINTA Sucrose synthase OS=Pinus taeda GN=SuSy1 ...    52   2e-05
tr|Q10LP5|Q10LP5_ORYSJ Os03g0340500 protein OS=Oryza sativa subs...    51   3e-05
tr|Q10LP4|Q10LP4_ORYSJ Sucrose synthase 2, putative, expressed O...    51   3e-05
tr|B8APD5|B8APD5_ORYSI Putative uncharacterized protein OS=Oryza...    51   3e-05
tr|Q8LPU9|Q8LPU9_DESAN Sucrose synthase (Fragment) OS=Deschampsi...    51   3e-05
tr|Q84T18|Q84T18_SOLTU Sucrose synthase OS=Solanum tuberosum PE=...    50   6e-05
tr|A9SM56|A9SM56_PHYPA Predicted protein OS=Physcomitrella paten...    50   6e-05
tr|Q9SLY2|Q9SLY2_CITUN Sucrose synthase OS=Citrus unshiu GN=CitS...    50   7e-05
tr|Q9FRX3|Q9FRX3_PYRPY Sucrose synthase 1 OS=Pyrus pyrifolia GN=...    49   2e-04
tr|Q0E7D3|Q0E7D3_COFAR Sucrose synthase OS=Coffea arabica GN=sus...    48   2e-04
tr|A6XJR2|A6XJR2_COFCA Sucrose synthase (Fragment) OS=Coffea can...    48   2e-04
tr|A5C6H7|A5C6H7_VITVI Putative uncharacterized protein (Chromos...    48   2e-04
tr|Q93WS3|Q93WS3_MAIZE Sucrose synthase (Fragment) OS=Zea mays P...    47   4e-04
tr|Q8L5H0|Q8L5H0_MAIZE Sucrose synthase 3 OS=Zea mays PE=2 SV=1        47   4e-04
tr|B4F8R3|B4F8R3_MAIZE Putative uncharacterized protein OS=Zea m...    47   4e-04
tr|Q9SLV8|Q9SLV8_CITUN Sucrose synthase OS=Citrus unshiu GN=CitS...    47   5e-04
tr|Q94G60|Q94G60_BETVU Sucrose synthase OS=Beta vulgaris PE=4 SV=1     46   8e-04
tr|A6ZEA3|A6ZEA3_BETVU Sucrose synthase 1 OS=Beta vulgaris GN=SB...    46   8e-04
tr|Q9M111|Q9M111_ARATH Putative sucrose synthetase OS=Arabidopsi...    45   0.001
tr|Q4LEV1|Q4LEV1_POTDI Sucrose synthase OS=Potamogeton distinctu...    45   0.002
tr|A7PDQ8|A7PDQ8_VITVI Chromosome chr11 scaffold_13, whole genom...    45   0.002
tr|A5B4G2|A5B4G2_VITVI Putative uncharacterized protein OS=Vitis...    45   0.002
tr|Q9ZPC5|Q9ZPC5_CRAPL Sucrose synthase OS=Craterostigma plantag...    43   0.007
tr|Q9T0M9|Q9T0M9_PEA Sucrose synthase OS=Pisum sativum PE=2 SV=1       43   0.007
tr|O81610|O81610_PEA Nodule-enhanced sucrose synthase OS=Pisum s...    43   0.007
tr|Q9ZPC6|Q9ZPC6_CRAPL Sucrose synthase OS=Craterostigma plantag...    43   0.009
tr|A7Q8G2|A7Q8G2_VITVI Chromosome chr5 scaffold_64, whole genome...    43   0.009
tr|Q8W1W3|Q8W1W3_BAMOL Sucrose synthase OS=Bambusa oldhamii PE=2...    42   0.020
tr|Q9XG65|Q9XG65_MEDTR Sucrose synthase OS=Medicago truncatula G...    41   0.026

>tr|A9NRB7|A9NRB7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 135

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIEET 82
           TRRYLEMFY LKYRDLVKTVP+A+EE+
Sbjct: 99  TRRYLEMFYTLKYRDLVKTVPLAVEES 125


>tr|A6N837|A6N837_PINTA Sucrose synthase OS=Pinus taeda GN=SuSy1
           PE=2 SV=1
          Length = 833

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 25/42 (59%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIEET-HATDEQAKAKIAEN 124
           TRRYLEMFY LKYR+LVKTVP+A+EE+ +  +E++   +A N
Sbjct: 785 TRRYLEMFYSLKYRNLVKTVPLAVEESVNGIEEKSTELLATN 826


>tr|Q10LP5|Q10LP5_ORYSJ Os03g0340500 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0340500 PE=2 SV=1
          Length = 809

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 21/28 (75%), Positives = 26/28 (92%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIEETH 85
           TRRYLEMFYILK+R+L KTVP+A++E H
Sbjct: 782 TRRYLEMFYILKFRELAKTVPLAVDEAH 809


>tr|Q10LP4|Q10LP4_ORYSJ Sucrose synthase 2, putative, expressed
           OS=Oryza sativa subsp. japonica GN=LOC_Os03g22120 PE=4
           SV=1
          Length = 642

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 21/28 (75%), Positives = 26/28 (92%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIEETH 85
           TRRYLEMFYILK+R+L KTVP+A++E H
Sbjct: 615 TRRYLEMFYILKFRELAKTVPLAVDEAH 642


>tr|B8APD5|B8APD5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_11498 PE=4 SV=1
          Length = 809

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 21/28 (75%), Positives = 26/28 (92%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIEETH 85
           TRRYLEMFYILK+R+L KTVP+A++E H
Sbjct: 782 TRRYLEMFYILKFRELAKTVPLAVDEAH 809


>tr|Q8LPU9|Q8LPU9_DESAN Sucrose synthase (Fragment) OS=Deschampsia
           antarctica PE=2 SV=1
          Length = 159

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 21/28 (75%), Positives = 27/28 (96%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIEETH 85
           TRRYLEMFYILK+R+LVK+VP+A++E H
Sbjct: 132 TRRYLEMFYILKFRELVKSVPLALDEAH 159


>tr|Q84T18|Q84T18_SOLTU Sucrose synthase OS=Solanum tuberosum PE=2
           SV=1
          Length = 811

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 21/28 (75%), Positives = 27/28 (96%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIEETH 85
           TRRYLEMFYILK+R+LVK+VP+AI++ H
Sbjct: 784 TRRYLEMFYILKFRELVKSVPLAIDDKH 811


>tr|A9SM56|A9SM56_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_186437 PE=4 SV=1
          Length = 825

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIEETHATDEQAK 106
           TRRYLEMFYILK+R+LVKTVP+A ++     EQ K
Sbjct: 789 TRRYLEMFYILKFRELVKTVPVASDDKSYLKEQEK 823


>tr|Q9SLY2|Q9SLY2_CITUN Sucrose synthase OS=Citrus unshiu GN=CitSUSA
           PE=2 SV=1
          Length = 811

 Score = 49.7 bits (117), Expect = 7e-05
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIEETH 85
           TRRYLEMFYILK+RDLVK+VP+A E  H
Sbjct: 784 TRRYLEMFYILKFRDLVKSVPLASENQH 811


>tr|Q9FRX3|Q9FRX3_PYRPY Sucrose synthase 1 OS=Pyrus pyrifolia
           GN=PypSUS1 PE=2 SV=1
          Length = 812

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = +2

Query: 2   TRRYLEMFYILKYRDLVKTVPIAIEETH 85
           TRRYLEMFYILK+RDL K+VP AI++ H
Sbjct: 785 TRRYLEMFYILKFRDLAKSVPEAIDDAH 812