BP916013
Clone id YMU001_000082_A01
Library
Length 202
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000082_A01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CACCATTAGTCCCTCTCTTAACGGTTAACCTCGCAATTAACTATCCTAAACTGCCCCACT
TCCCCACAGTCCCTGGATAACTAGTGAAGCTCAACAGTTTTCCCTCCCCATATCTGTCTC
ACGAGTACCAAGAGGCTTGAGTGCTGCAACAGCAGGAGAGGGCGTGATGCATAGCCGTTT
TCAATACCTGAACATTGCTCTC
■■Homology search results ■■ -
sp_hit_id Q679P3
Definition sp|Q679P3|PDLI7_CHICK PDZ and LIM domain protein 7 OS=Gallus gallus
Align length 25
Score (bit) 28.9
E-value 8.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916013|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_A01.
(202 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q679P3|PDLI7_CHICK PDZ and LIM domain protein 7 OS=Gallus gal... 29 8.4

>sp|Q679P3|PDLI7_CHICK PDZ and LIM domain protein 7 OS=Gallus gallus
GN=PDLIM7 PE=1 SV=1
Length = 416

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2

Query: 92 QQFSLPISVSRVPRGLSAATAGEGV 166
+ FS+P+S+SR+ G AA AG GV
Sbjct: 22 KDFSMPLSISRLTPGGKAAQAGVGV 46


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916013|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_A01.
(202 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******