BP916017
Clone id YMU001_000082_A06
Library
Length 474
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000082_A06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTTCACATGCAAACTCTTGCTCACCACTTATCATGTCATACAATGTGGAGGACGGCTTCT
TTGCATGTGAAGCCGATGCAGCTTGACTATAGAACGCTTCTGAATGTCGTAAACTGCCAT
TTGCAGAGCTTTGAGGTGACACAGATGCATCGACAACAGGAGAAATGCGGCCCGTGGGCG
TAACTAGAAAGCTTCTGAAAGGGGAGCTATTACCCACCTTATCAGTATTATTTGCATTGA
TGAATCCCTGTTTGATGAGAGCAGCAATCTCTCCACTCTTAAGAGCCTCCCCAACGCCGC
TCTCAAGCGCTACATACTTCTTAGACTTCTCTGATAATTTGCCCCTCTTTTCTGGTTTCT
GAGCTTGCTTGTGATGCTTGATAACCTGTGATGATGAGGCTTAGCTAGAAGGCACAATCG
GTGAAGACGGGAAAGGCCTGCCAATGCAGCACCAAGCTCCATGCGTCTTCACGA
■■Homology search results ■■ -
sp_hit_id Q5LRC0
Definition sp|Q5LRC0|CAAL_SILPO Carboxylate-amine ligase SPO2209 OS=Silicibacter pomeroyi
Align length 57
Score (bit) 31.6
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916017|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_A06.
(474 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5LRC0|CAAL_SILPO Carboxylate-amine ligase SPO2209 OS=Silicib... 32 1.9
sp|Q5F4A9|AR6P4_CHICK ADP-ribosylation factor-like protein 6-int... 30 5.4
sp|P31629|ZEP2_HUMAN Transcription factor HIVEP2 OS=Homo sapiens... 30 7.1
sp|Q9NAE2|HUTU_CAEEL Probable urocanate hydratase OS=Caenorhabdi... 30 7.1

>sp|Q5LRC0|CAAL_SILPO Carboxylate-amine ligase SPO2209
OS=Silicibacter pomeroyi GN=SPO2209 PE=3 SV=1
Length = 384

Score = 31.6 bits (70), Expect = 1.9
Identities = 23/57 (40%), Positives = 28/57 (49%)
Frame = +3

Query: 174 VGVTRKLLKGELLPTLSVLFALMNPCLMRAAISPLLRASPTPLSSATYFLDFSDNLP 344
+GV K L+ +L+P LS M L +A SP T LSS Y L DNLP
Sbjct: 144 IGVEDKALRADLMPQLSYFLPHM---LALSASSPFWNGEDTGLSS--YRLTIFDNLP 195


>sp|Q5F4A9|AR6P4_CHICK ADP-ribosylation factor-like protein
6-interacting protein 4 OS=Gallus gallus GN=ARL6IP4 PE=2
SV=1
Length = 231

Score = 30.0 bits (66), Expect = 5.4
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -3

Query: 379 KHHKQAQKPEKRGKLSEKSKKYVALESGVGEAL 281
KH + +K + + KL +KSK+ V E GV EAL
Sbjct: 100 KHKDKKKKKKMKKKLKKKSKERVKEERGVSEAL 132


>sp|P31629|ZEP2_HUMAN Transcription factor HIVEP2 OS=Homo sapiens
GN=HIVEP2 PE=1 SV=2
Length = 2446

Score = 29.6 bits (65), Expect = 7.1
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Frame = +3

Query: 135 GDTDASTTGEMRPVGVTRKLLKGELLPT--------LSVLFALMNPCLMRAAI--SPLLR 284
GD D S T ++ + + +++P+ F NP L+ A + SPL+R
Sbjct: 483 GDVDPSQTSMLKSTKFNSESRQPQIIPSSIRNEGKLYPANFQGSNPVLLEAPVDSSPLIR 542

Query: 285 ASPTPLSSAT 314
++ P SSAT
Sbjct: 543 SNSVPTSSAT 552


>sp|Q9NAE2|HUTU_CAEEL Probable urocanate hydratase OS=Caenorhabditis
elegans GN=Y51H4A.7 PE=3 SV=2
Length = 670

Score = 29.6 bits (65), Expect = 7.1
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -3

Query: 313 VALESGVGEALKSGEIAALIKQGFINANNTDKVGNSSPFR 194
VAL S E +KSG+++A I I+ ++ D G SPFR
Sbjct: 516 VALASAFNELVKSGKVSAAI---VISRDHHDVSGTDSPFR 552


tr_hit_id B8NED3
Definition tr|B8NED3|B8NED3_ASPFL Glycosyl transferase family 8 family, putative OS=Aspergillus flavus NRRL3357
Align length 62
Score (bit) 36.6
E-value 0.64
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916017|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_A06.
(474 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8NED3|B8NED3_ASPFL Glycosyl transferase family 8 family, put... 37 0.64
tr|Q07I46|Q07I46_RHOP5 Response regulator receiver modulated dig... 33 5.4
tr|B7G1I2|B7G1I2_PHATR Predicted protein OS=Phaeodactylum tricor... 33 7.1
tr|Q54T90|Q54T90_DICDI Putative uncharacterized protein OS=Dicty... 33 9.3

>tr|B8NED3|B8NED3_ASPFL Glycosyl transferase family 8 family,
putative OS=Aspergillus flavus NRRL3357 GN=AFLA_060420
PE=4 SV=1
Length = 371

Score = 36.6 bits (83), Expect = 0.64
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = -3

Query: 319 KYVALESGVGEALKSGEIAALIKQGFINANNTDKVGNSSPFRSFLVTPTGRISPVVDASV 140
K V L +G A + AL+ Q NT + +SP F VTP G SP+V S
Sbjct: 15 KCVVLVAGTALAFALIQGIALVSQPISVRVNTPSINQNSPQSPFSVTPAGTTSPIVTEST 74

Query: 139 SP 134
P
Sbjct: 75 KP 76


>tr|Q07I46|Q07I46_RHOP5 Response regulator receiver modulated
diguanylate phosphodiesterase OS=Rhodopseudomonas
palustris (strain BisA53) GN=RPE_4465 PE=4 SV=1
Length = 405

Score = 33.5 bits (75), Expect = 5.4
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +3

Query: 144 DASTTGEMRPVGVTRKLLKGELLPTLSVLFALMNPCLMRAAISPLLRASPTP 299
D+ +G +R +G R LL LLPTLS F+ ++R ++PLL A P P
Sbjct: 105 DSIMSGAIRQLGFERGLL---LLPTLSTPFSSR---MLRECVAPLLPAEPAP 150


>tr|B7G1I2|B7G1I2_PHATR Predicted protein OS=Phaeodactylum
tricornutum CCAP 1055/1 GN=PHATRDRAFT_46522 PE=4 SV=1
Length = 526

Score = 33.1 bits (74), Expect = 7.1
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = -3

Query: 364 AQKPEKRGKLSEKS-----KKYVALESGVGEALKSGEIAALIKQGFINANNTDKVGNSSP 200
+QKP K +EK K A+ S G + KSGE L+ + NAN + S+
Sbjct: 327 SQKPSTAAKAAEKPLNAELKGSSAMSSSTGASAKSGEGTTLVDKNNANANTNNLASKSTR 386

Query: 199 FRSFLVTPTGRISP---VVDASVSPQSS 125
R PT + P +V ++SP+++
Sbjct: 387 PR----LPTSKRDPDMTLVIKNISPETT 410


>tr|Q54T90|Q54T90_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0204288 PE=4 SV=1
Length = 465

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = -3

Query: 379 KHHKQAQKPEKRGKLSEKSKKYVALESGVGEALKSGEIAALIKQGFINANNTDKV 215
+++++ ++ KR K E+SK Y +L +G S ++ IKQ +IN N+T V
Sbjct: 110 QYYEEQEREYKRNKKEEESKLYQSLYTGA----TSFKVPRNIKQNYINPNSTSLV 160