BP916023
Clone id YMU001_000082_B01
Library
Length 270
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000082_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GATTTTGCAGAGAACTACTCATTTGAGGAGTAAAATGAGATACAATCAATGCATTGGCAC
ACAGATCAATGTACAATTTTGGTTCACATCACTTACCATTGAAGTAGCAAGGATGAGAGT
ATAAGCAAAGAGATGCATTTTTACTATTCGAATGATAAGCAACATGATACCCTCATTGTC
TAGCAATTGTTTTCTTCTACATAAGTGGCTGAAAGATTGAGGTTTAAAATTAAAAAGAAT
CGGGTATGGGATGGAGCAACTTCACAATTC
■■Homology search results ■■ -
sp_hit_id Q1EHT7
Definition sp|Q1EHT7|C3H4_ORYSJ Zinc finger CCCH domain-containing protein 4 OS=Oryza sativa subsp. japonica
Align length 54
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916023|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_B01.
(270 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q1EHT7|C3H4_ORYSJ Zinc finger CCCH domain-containing protein ... 31 2.2
sp|Q68DX3|FRPD2_HUMAN FERM and PDZ domain-containing protein 2 O... 29 6.4
sp|Q6IN97|FRP2L_HUMAN Putative protein FRMPD2-like OS=Homo sapie... 29 6.4

>sp|Q1EHT7|C3H4_ORYSJ Zinc finger CCCH domain-containing protein 4
OS=Oryza sativa subsp. japonica GN=Os01g0256800 PE=2
SV=1
Length = 1007

Score = 30.8 bits (68), Expect = 2.2
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -1

Query: 225 KPQSFSHLCRRKQLLDNEGIMLLIIRIVKMHLFAYTLILATSMVSDVNQNCTLI 64
+P F H+C R ++L+ E + L + HL ++ AT VS + T +
Sbjct: 637 QPSEFHHMCLRHEVLELENVNSLPLEAENSHLDSHRRCAATPYVSPADFGTTTV 690


>sp|Q68DX3|FRPD2_HUMAN FERM and PDZ domain-containing protein 2
OS=Homo sapiens GN=FRMPD2 PE=2 SV=1
Length = 1309

Score = 29.3 bits (64), Expect = 6.4
Identities = 18/63 (28%), Positives = 23/63 (36%)
Frame = -1

Query: 249 PYPILFNFKPQSFSHLCRRKQLLDNEGIMLLIIRIVKMHLFAYTLILATSMVSDVNQNCT 70
P+ P+S HLC+ Q D LATS+ DV QNC
Sbjct: 1244 PWASSLTHSPESHPHLCKLHQERDES-------------------TLATSLEKDVRQNCY 1284

Query: 69 LIC 61
+C
Sbjct: 1285 SVC 1287


>sp|Q6IN97|FRP2L_HUMAN Putative protein FRMPD2-like OS=Homo sapiens
GN=FRMPD2L1 PE=5 SV=1
Length = 320

Score = 29.3 bits (64), Expect = 6.4
Identities = 18/63 (28%), Positives = 23/63 (36%)
Frame = -1

Query: 249 PYPILFNFKPQSFSHLCRRKQLLDNEGIMLLIIRIVKMHLFAYTLILATSMVSDVNQNCT 70
P+ P+S HLC+ Q D LATS+ DV QNC
Sbjct: 255 PWASSLTHSPESHPHLCKLHQERDES-------------------TLATSLEKDVRQNCY 295

Query: 69 LIC 61
+C
Sbjct: 296 SVC 298


tr_hit_id A7T377
Definition tr|A7T377|A7T377_NEMVE Predicted protein OS=Nematostella vectensis
Align length 56
Score (bit) 39.3
E-value 0.098
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916023|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_B01.
(270 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7T377|A7T377_NEMVE Predicted protein OS=Nematostella vectens... 39 0.098
tr|B6M9L1|B6M9L1_BRAFL Putative uncharacterized protein OS=Branc... 39 0.13
tr|B6PI51|B6PI51_BRAFL Putative uncharacterized protein OS=Branc... 36 1.1
tr|Q30QY9|Q30QY9_SULDN Putative uncharacterized protein OS=Sulfu... 34 4.1

>tr|A7T377|A7T377_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g221694 PE=4 SV=1
Length = 455

Score = 39.3 bits (90), Expect = 0.098
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1

Query: 1 DFAENYSFEE*NEIQSMHWHTDQCTILVHITYH*SSKDESISKEMHFYYSNDKQHD 168
DF+ENY+ + +EIQS HW +Q T+ + S + + H ++D HD
Sbjct: 55 DFSENYACQHQDEIQSAHWCQEQVTLFTVAIWAKDSANTDTTCNSHVIVTDDHNHD 110


>tr|B6M9L1|B6M9L1_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_79791 PE=4 SV=1
Length = 675

Score = 38.9 bits (89), Expect = 0.13
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +1

Query: 1 DFAENYSFEE*NEIQSMHWHTDQCTILVHITYH*SSKDESISKEMHFYYSNDKQHDTLIV 180
DFAENY + +EIQS +W+ + T+ + Y+ + D + E S++ H++ V
Sbjct: 432 DFAENYKVKTTDEIQSAYWNCEMVTLHPVVLYYRAQGDSELQHESICVVSDELGHNSSTV 491

Query: 181 *QLFSST*VAERLRFKIKKN 240
+ +RL KIK+N
Sbjct: 492 YA------ILKRLLPKIKQN 505


>tr|B6PI51|B6PI51_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_107227 PE=4 SV=1
Length = 485

Score = 35.8 bits (81), Expect = 1.1
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1

Query: 1 DFAENYSFEE*NEIQSMHWHTDQCTILVHITYH*SSKDE 117
DFAENY + +EIQS +W+ D T+ + Y+ S E
Sbjct: 115 DFAENYKVKSNDEIQSAYWNCDMVTLHPTVIYYKSENGE 153


>tr|Q30QY9|Q30QY9_SULDN Putative uncharacterized protein
OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM
1251) GN=Suden_1314 PE=4 SV=1
Length = 315

Score = 33.9 bits (76), Expect = 4.1
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = -1

Query: 171 GIMLLIIRIVKMHLFAYTLILATSMVSDVNQNCT 70
G+ L++++I+ ++LFAY L + T+ +SD NQ T
Sbjct: 99 GMYLIVLKIINLYLFAYWLRIHTTDISDKNQPYT 132