BP916024 |
Clone id |
YMU001_000082_B02 |
Library |
YMU01 |
Length |
410 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000082_B02. |
Accession |
BP916024 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTGTTTGCAGCAAGCTAAGATCTACCAATGGCATTAGGCATTAAAAACATTAAAGTTAGA CAGTCTCTCTCAAATGTACAAGGTTGAAGCCTAGGGCATTAATGCATAAAAGGGATATGG AGGTGCAAGGTCAGAGTCTGCTTTCAACGATGGGTAGCAGGCTGGGAAACTGGCTGTTGA GGCACTGCATATACCATAGGAACTCCACTTACTGCAGGACTAGGTAGTAGCCCCGGTCCA GGTAAAGGCGCTCTAGTCACATAAGGCCCAGCGATTGGAGAAGGCTGGAGTGGTACAGGC GTACCAATAGTCGACCCCCCTGGTCCAACCATGGGAGGGCAAACTGGAGCACCAAAAACA GTAGTCCCTGCGAGATTTGATGGTCCTGGATGTGTAAGAACTGATGCCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8K1S3 |
Definition |
sp|Q8K1S3|UNC5B_MOUSE Netrin receptor UNC5B OS=Mus musculus |
Align length |
65 |
Score (bit) |
33.5 |
E-value |
0.34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916024|Adiantum capillus-veneris mRNA, clone: YMU001_000082_B02. (410 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q8K1S3|UNC5B_MOUSE Netrin receptor UNC5B OS=Mus musculus GN=U... 33 0.34 sp|Q8IZJ1|UNC5B_HUMAN Netrin receptor UNC5B OS=Homo sapiens GN=U... 33 0.34 sp|P18583|SON_HUMAN SON protein OS=Homo sapiens GN=SON PE=1 SV=3 33 0.45 sp|P19706|MYSB_ACACA Myosin heavy chain IB OS=Acanthamoeba caste... 33 0.45 sp|Q9XSJ7|CO1A1_CANFA Collagen alpha-1(I) chain OS=Canis familia... 33 0.45 sp|A5D7F8|SH3R1_BOVIN Putative E3 ubiquitin-protein ligase SH3RF... 32 0.77 sp|Q07563|COHA1_MOUSE Collagen alpha-1(XVII) chain OS=Mus muscul... 32 0.77 sp|Q9YIB4|CO1A1_CYNPY Collagen alpha-1(I) chain OS=Cynops pyrrho... 32 0.77 sp|P02457|CO1A1_CHICK Collagen alpha-1(I) chain OS=Gallus gallus... 32 0.77 sp|Q99MA0|CITE4_RAT Cbp/p300-interacting transactivator 4 OS=Rat... 32 0.77 sp|A3LN86|PAN1_PICST Actin cytoskeleton-regulatory complex prote... 32 1.00 sp|P02467|CO1A2_CHICK Collagen alpha-2(I) chain (Fragments) OS=G... 32 1.00 sp|P02453|CO1A1_BOVIN Collagen alpha-1(I) chain OS=Bos taurus GN... 32 1.3 sp|Q5RBM8|RBM12_PONAB RNA-binding protein 12 OS=Pongo abelii GN=... 31 1.7 sp|Q8SQ27|RBM12_MACMU RNA-binding protein 12 OS=Macaca mulatta G... 31 1.7 sp|Q9NTZ6|RBM12_HUMAN RNA-binding protein 12 OS=Homo sapiens GN=... 31 1.7 sp|Q3U962|CO5A2_MOUSE Collagen alpha-2(V) chain OS=Mus musculus ... 31 1.7 sp|Q9JI03|CO5A1_RAT Collagen alpha-1(V) chain OS=Rattus norvegic... 31 1.7 sp|P20908|CO5A1_HUMAN Collagen alpha-1(V) chain OS=Homo sapiens ... 31 1.7 sp|Q60467|CO5A1_CRILO Collagen alpha-1(V) chain OS=Cricetulus lo... 31 1.7 sp|P02454|CO1A1_RAT Collagen alpha-1(I) chain OS=Rattus norvegic... 31 1.7 sp|P11087|CO1A1_MOUSE Collagen alpha-1(I) chain OS=Mus musculus ... 31 1.7 sp|P02452|CO1A1_HUMAN Collagen alpha-1(I) chain OS=Homo sapiens ... 31 1.7 sp|Q8BVM2|ANTRL_MOUSE Anthrax toxin receptor-like OS=Mus musculu... 31 1.7 sp|Q7T6X1|YR610_MIMIV Uncharacterized protein R610 OS=Acanthamoe... 31 2.2 sp|Q6P6Q2|K2C5_RAT Keratin, type II cytoskeletal 5 OS=Rattus nor... 31 2.2 sp|Q0P5D2|CPSF6_BOVIN Cleavage and polyadenylation specificity f... 31 2.2 sp|Q02388|CO7A1_HUMAN Collagen alpha-1(VII) chain OS=Homo sapien... 31 2.2 sp|O08722|UNC5B_RAT Netrin receptor UNC5B OS=Rattus norvegicus G... 30 2.9 sp|P51532|SMCA4_HUMAN Probable global transcription activator SN... 30 2.9
>sp|Q8K1S3|UNC5B_MOUSE Netrin receptor UNC5B OS=Mus musculus GN=Unc5b PE=1 SV=1 Length = 945
Score = 33.5 bits (75), Expect = 0.34 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Frame = -3
Query: 351 CSSLPSHGWTRGVDYWYACTTPAFSNRWALCD*SAFTWTGATT-----*SCSKWSSYGIC 187 CS+ GW + CT PA N A C+ AF T TT + ++WS + C Sbjct: 258 CSNRCGRGWQKRTR---TCTNPAPLNGGAFCEGQAFQKTACTTVCPVDGAWTEWSKWSAC 314
Query: 186 SASTA 172 S A Sbjct: 315 STECA 319
>sp|Q8IZJ1|UNC5B_HUMAN Netrin receptor UNC5B OS=Homo sapiens GN=UNC5B PE=1 SV=2 Length = 945
Score = 33.5 bits (75), Expect = 0.34 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Frame = -3
Query: 351 CSSLPSHGWTRGVDYWYACTTPAFSNRWALCD*SAFTWTGATT-----*SCSKWSSYGIC 187 CS+ GW + CT PA N A C+ AF T TT + ++WS + C Sbjct: 258 CSNRCGRGWQKRTR---TCTNPAPLNGGAFCEGQAFQKTACTTICPVDGAWTEWSKWSAC 314
Query: 186 SASTA 172 S A Sbjct: 315 STECA 319
>sp|P18583|SON_HUMAN SON protein OS=Homo sapiens GN=SON PE=1 SV=3 Length = 2426
Score = 33.1 bits (74), Expect = 0.45 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = -1
Query: 407 ASVLTHPGPSNLAGTTVFGAPVCPPMVGPGGSTIGTPVPLQPSPIAGP 264 AS + PGP + + G PV P + PG S TPVP P P++ P Sbjct: 378 ASAMELPGPPATSMPELQGPPVTPVLELPGPS--ATPVPELPGPLSTP 423
>sp|P19706|MYSB_ACACA Myosin heavy chain IB OS=Acanthamoeba castellanii GN=MIB PE=1 SV=2 Length = 1147
Score = 33.1 bits (74), Expect = 0.45 Identities = 25/61 (40%), Positives = 28/61 (45%) Frame = +1
Query: 217 GLGSSPGPGKGALVT*GPAIGEGWSGTGVPIVDPPGPTMGGQTGAPKTVVPARFDGPGCV 396 G+G PG G+G GP +G G G G P GP MGG G P P GPG Sbjct: 980 GMGG-PGAGRG-----GPGMGRGGPGMGGPGAGRGGPGMGG-PGGPGRGGPG---GPGAG 1029
Query: 397 R 399 R Sbjct: 1030 R 1030
Score = 31.6 bits (70), Expect = 1.3 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = +1
Query: 217 GLGSSPGPGKGALVT*GPAIGEGWSGTGVPIVDPPGPTMG-GQTGAPKTVVPAR 375 G+G G G+G GP G G G G P GP G G AP PA+ Sbjct: 1044 GMGGPGGAGRG-----GPGAGRGGPGMGGPGAGRGGPGAGRGAAPAPAPAAPAK 1092
Score = 30.4 bits (67), Expect = 2.9 Identities = 23/65 (35%), Positives = 25/65 (38%) Frame = +1
Query: 196 IGTPLTAGLGSSPGPGKGALVT*GPAIGEGWSGTGVPIVDPPGPTMGGQTGAPKTVVPAR 375 +G P G G GPG G GP G G GP MGG GA + A Sbjct: 1012 MGGPGGPGRGGPGGPGAGRGGPGGPGAGRG------------GPGMGGPGGAGRGGPGAG 1059
Query: 376 FDGPG 390 GPG Sbjct: 1060 RGGPG 1064
>sp|Q9XSJ7|CO1A1_CANFA Collagen alpha-1(I) chain OS=Canis familiaris GN=COL1A1 PE=1 SV=1 Length = 1460
Score = 33.1 bits (74), Expect = 0.45 Identities = 31/83 (37%), Positives = 35/83 (42%), Gaps = 9/83 (10%) Frame = +1
Query: 169 TGC*GTAYTIGTPLTAGLGSSPGP--------GKGALVT*GPAIGEGWSGTGVPIVDPPG 324 TG G A +G P +G PGP GKGA GPA G G PPG Sbjct: 870 TGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGARGETGPAGRPGEVGP----PGPPG 925
Query: 325 PTMGGQTGAPKTVVPARFDG-PG 390 P G+ G+P PA G PG Sbjct: 926 P--AGEKGSPGADGPAGAPGTPG 946
>sp|A5D7F8|SH3R1_BOVIN Putative E3 ubiquitin-protein ligase SH3RF1 OS=Bos taurus GN=SH3RF1 PE=2 SV=1 Length = 840
Score = 32.3 bits (72), Expect = 0.77 Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 11/88 (12%) Frame = +1
Query: 142 FQRWVAGWETGC*GTAYTIGT-------PLTAGLGSSPGPGKGALVT*GPAIGEGW---- 288 F+R GW G IG P+T + +S GK ++T GPA G Sbjct: 469 FERCQDGWFKGTSMHTSKIGVFPGNYVAPVTRAV-TSASQGKVPMLTTGPASRGGVLANP 527
Query: 289 SGTGVPIVDPPGPTMGGQTGAPKTVVPA 372 TG P PPG + G G P VV A Sbjct: 528 PSTGGPAQKPPGNGVAGGPGVPTAVVSA 555
>sp|Q07563|COHA1_MOUSE Collagen alpha-1(XVII) chain OS=Mus musculus GN=Col17a1 PE=2 SV=3 Length = 1470
Score = 32.3 bits (72), Expect = 0.77 Identities = 22/66 (33%), Positives = 28/66 (42%) Frame = +1
Query: 172 GC*GTAYTIGTPLTAGLGSSPGPGKGALVT*GPAIGEGWSGTGVPIVDPPGPTMGGQTGA 351 G G A G P G PG + ++ G +I E S GV + PPGP G G Sbjct: 843 GTPGPAGPAGLPGQQGPRGEPGLAGDSFLSSGSSISEVLSAQGVDLRGPPGPP--GPRGP 900
Query: 352 PKTVVP 369 P +P Sbjct: 901 PGPSIP 906
>sp|Q9YIB4|CO1A1_CYNPY Collagen alpha-1(I) chain OS=Cynops pyrrhogaster GN=COL1A1 PE=2 SV=1 Length = 1450
Score = 32.3 bits (72), Expect = 0.77 Identities = 31/83 (37%), Positives = 38/83 (45%), Gaps = 9/83 (10%) Frame = +1
Query: 169 TGC*GTAYTIGTPLTAGLGSSPGP--------GKGALVT*GPAIGEGWSGTGVPIVDPPG 324 TG G A +G P +G PGP KG+ GPA G SG P PPG Sbjct: 860 TGFPGAAGRLGPPGPSGNAGPPGPPGPGGKEGAKGSRGETGPA---GRSGEPGP-AGPPG 915
Query: 325 PTMGGQTGAPKTVVPARFDG-PG 390 P+ G+ G+P + PA G PG Sbjct: 916 PS--GEKGSPGSDGPAGAPGIPG 936
Score = 31.2 bits (69), Expect = 1.7 Identities = 25/73 (34%), Positives = 31/73 (42%) Frame = +1
Query: 166 ETGC*GTAYTIGTPLTAGLGSSPGPGKGALVT*GPAIGEGWSGTGVPIVDPPGPTMGGQT 345 + G G A G P AG +PGP KG GP G+ G + PPGP+ G Sbjct: 823 DAGAPGPAGPTGAPGPAGNVGAPGP-KGTRGAAGPPGATGFPGAAGRL-GPPGPS--GNA 878
Query: 346 GAPKTVVPARFDG 384 G P P +G Sbjct: 879 GPPGPPGPGGKEG 891
>sp|P02457|CO1A1_CHICK Collagen alpha-1(I) chain OS=Gallus gallus GN=COL1A1 PE=1 SV=3 Length = 1453
Score = 32.3 bits (72), Expect = 0.77 Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 8/81 (9%) Frame = +1
Query: 166 ETGC*GTAYTIGTPLTAGLGSSPGPG--------KGALVT*GPAIGEGWSGTGVPIVDPP 321 ETG G G P AG +PGP KGA + GP G+ G V PP Sbjct: 817 ETGDAGAKGDAGPPGPAGPTGAPGPAGZVGAPGPKGARGSAGPPGATGFPG-AAGRVGPP 875
Query: 322 GPTMGGQTGAPKTVVPARFDG 384 GP+ G G P PA +G Sbjct: 876 GPS--GNIGLPGPPGPAGKZG 894
>sp|Q99MA0|CITE4_RAT Cbp/p300-interacting transactivator 4 OS=Rattus norvegicus GN=Cited4 PE=2 SV=1 Length = 179
Score = 32.3 bits (72), Expect = 0.77 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Frame = -1
Query: 392 HPGPSNLAGTTVFGAPVCPPMVGPGGS----TIGTPVPLQPSPIAGP 264 +PGP +G GAP+ PP P G+ + G+PV QP P++ P Sbjct: 26 YPGPGLDSGLRPRGAPLGPPP--PSGTLAYGSFGSPVSFQPFPVSQP 70
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9WAR9 |
Definition |
tr|A9WAR9|A9WAR9_CHLAA LAO/AO transport system ATPase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) |
Align length |
72 |
Score (bit) |
39.3 |
E-value |
0.1 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916024|Adiantum capillus-veneris mRNA, clone: YMU001_000082_B02. (410 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9WAR9|A9WAR9_CHLAA LAO/AO transport system ATPase OS=Chlorof... 39 0.100 tr|B2QKE5|B2QKE5_9CHLR LAO/AO transport system ATPase OS=Chlorof... 39 0.100 tr|Q75LH8|Q75LH8_ORYSJ Putative glucanase (Putative uncharacteri... 39 0.17 tr|Q6NFQ0|Q6NFQ0_CORDI Collagen-like repeat protein OS=Corynebac... 38 0.22 tr|B4RGM0|B4RGM0_PHEZH Long-chain fatty-acid-CoA ligase OS=Pheny... 38 0.29 tr|Q2I8Y0|Q2I8Y0_PETMA Type II collagen alpha 1a (Fragment) OS=P... 37 0.38 tr|B3Y964|B3Y964_LAMJA Fibrillar collagen (Fragment) OS=Lampetra... 37 0.38 tr|B8I5G1|B8I5G1_CLOCE S-layer domain protein OS=Clostridium cel... 37 0.38 tr|Q10B16|Q10B16_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 37 0.49 tr|Q10B15|Q10B15_ORYSJ cDNA clone:002-149-C11, full insert seque... 37 0.49 tr|B8AMS1|B8AMS1_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.49 tr|Q29JL2|Q29JL2_DROPS GA17455 OS=Drosophila pseudoobscura pseud... 37 0.49 tr|B4H368|B4H368_DROPE GL13332 OS=Drosophila persimilis GN=GL133... 37 0.49 tr|A1T191|A1T191_MYCVP Putative uncharacterized protein OS=Mycob... 37 0.65 tr|B6MTA1|B6MTA1_BRAFL Putative uncharacterized protein OS=Branc... 37 0.65 tr|Q5NT95|Q5NT95_PAROL Type 1 collagen alpha 2 OS=Paralichthys o... 36 0.84 tr|Q0RF20|Q0RF20_FRAAA Putative Serine/threonine protein kinase ... 36 0.84 tr|A0Q9U4|A0Q9U4_MYCA1 Putative uncharacterized protein OS=Mycob... 36 0.84 tr|A8E4C5|A8E4C5_PSEVI HrpW OS=Pseudomonas viridiflava GN=hrpW P... 36 0.84 tr|A8E4A5|A8E4A5_PSEVI HrpW OS=Pseudomonas viridiflava GN=hrpW P... 36 0.84 tr|A7PGP3|A7PGP3_VITVI Chromosome chr17 scaffold_16, whole genom... 36 0.84 tr|Q4SAN6|Q4SAN6_TETNG Chromosome undetermined SCAF14681, whole ... 36 1.1 tr|Q89M75|Q89M75_BRAJA Blr4318 protein OS=Bradyrhizobium japonic... 36 1.1 tr|B2FUC8|B2FUC8_STRMK Putative outer membrane surface heamagglu... 35 1.4 tr|Q2I8X9|Q2I8X9_PETMA Type II collagen alpha 1b (Fragment) OS=P... 35 1.9 tr|Q9RKR9|Q9RKR9_STRCO Putative multi-domain regulatory protein ... 35 1.9 tr|B1M0K1|B1M0K1_METRJ Putative uncharacterized protein OS=Methy... 35 1.9 tr|Q16RP4|Q16RP4_AEDAE Putative uncharacterized protein OS=Aedes... 35 1.9 tr|Q802B5|Q802B5_XENLA Col1a1 protein OS=Xenopus laevis GN=col1a... 35 2.5 tr|Q9JL61|Q9JL61_MOUSE Regulator factor X 5 OS=Mus musculus GN=R... 35 2.5
>tr|A9WAR9|A9WAR9_CHLAA LAO/AO transport system ATPase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=Caur_0043 PE=4 SV=1 Length = 316
Score = 39.3 bits (90), Expect = 0.100 Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Frame = +1
Query: 187 AYTIGTPLTAGLGSSPGPGKGALVT*GPAIGEGWSGTGVPI----VDPPGPTMGGQTGAP 354 AY G+ G+ PG GK LVT A+ + W GVP+ VDP P GG Sbjct: 39 AYPYGSAHRVGITGPPGAGKSTLVT---ALAQEWRKRGVPVGIVAVDPSSPFSGGAVLGD 95
Query: 355 KTVVPARFDGPG 390 + + A PG Sbjct: 96 RIRMQALGGDPG 107
>tr|B2QKE5|B2QKE5_9CHLR LAO/AO transport system ATPase OS=Chloroflexus sp. Y-400-fl GN=Chy400DRAFT_1459 PE=4 SV=1 Length = 316
Score = 39.3 bits (90), Expect = 0.100 Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Frame = +1
Query: 187 AYTIGTPLTAGLGSSPGPGKGALVT*GPAIGEGWSGTGVPI----VDPPGPTMGGQTGAP 354 AY G+ G+ PG GK LVT A+ + W GVP+ VDP P GG Sbjct: 39 AYPYGSAHRVGITGPPGAGKSTLVT---ALAQEWRKRGVPVGIVAVDPSSPFSGGAVLGD 95
Query: 355 KTVVPARFDGPG 390 + + A PG Sbjct: 96 RIRMQALGGDPG 107
>tr|Q75LH8|Q75LH8_ORYSJ Putative glucanase (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0096I06.29 PE=4 SV=1 Length = 594
Score = 38.5 bits (88), Expect = 0.17 Identities = 33/93 (35%), Positives = 44/93 (47%) Frame = +1
Query: 106 IKGIWRCKVRVCFQRWVAGWETGC*GTAYTIGTPLTAGLGSSPGPGKGALVT*GPAIGEG 285 + GI + VC + AG+ G GT P+ G G+ G G G GPA+G Sbjct: 473 VSGIISRDLNVC--SYGAGYSPGVTGTV-----PVGGGAGAGAGVGVGVTPM-GPAVG-- 522
Query: 286 WSGTGVPIVDPPGPTMGGQTGAPKTVVPARFDG 384 GTG V P GP +GG +G+ TV+ A G Sbjct: 523 --GTGGAGVTPMGPAVGGGSGS--TVLNANSPG 551
>tr|Q6NFQ0|Q6NFQ0_CORDI Collagen-like repeat protein OS=Corynebacterium diphtheriae GN=DIP1836 PE=4 SV=1 Length = 262
Score = 38.1 bits (87), Expect = 0.22 Identities = 20/42 (47%), Positives = 22/42 (52%) Frame = -1
Query: 389 PGPSNLAGTTVFGAPVCPPMVGPGGSTIGTPVPLQPSPIAGP 264 PGP+ AG T P PP G GGST+ P P P AGP Sbjct: 63 PGPAGPAGATGPMGPPGPPGGGSGGSTVSVPGPQGPPGPAGP 104
>tr|B4RGM0|B4RGM0_PHEZH Long-chain fatty-acid-CoA ligase OS=Phenylobacterium zucineum (strain HLK1) GN=PHZ_c2517 PE=4 SV=1 Length = 490
Score = 37.7 bits (86), Expect = 0.29 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 6/60 (10%) Frame = +1
Query: 220 LGSSPGPGKGALVT*GPAIGEGWSGTGVPIVDPP---GPTMGGQTGAPKTVV---PARFD 381 +G PGPG AL P + EG+S +P P T GG TG PK +V PAR+D Sbjct: 108 VGEPPGPGTPALPANLPGL-EGYSADPLPAAVSPHWKAMTSGGSTGRPKVIVDATPARWD 166
>tr|Q2I8Y0|Q2I8Y0_PETMA Type II collagen alpha 1a (Fragment) OS=Petromyzon marinus GN=Col2a1a PE=2 SV=2 Length = 740
Score = 37.4 bits (85), Expect = 0.38 Identities = 29/81 (35%), Positives = 35/81 (43%) Frame = +1
Query: 166 ETGC*GTAYTIGTPLTAGLGSSPGPGKGALVT*GPAIGEGWSGTGVPIVDPPGPTMGGQT 345 + G G G+P G PGP KGA GP+ G+ G V PPGP G Sbjct: 116 DAGAPGPQGPAGSPGPQGPNGVPGP-KGARGAQGPSGATGFPGAAGR-VGPPGPN--GNP 171
Query: 346 GAPKTVVPARFDGPGCVRTDA 408 G P P DGP +R D+ Sbjct: 172 GPPGPPGPGGKDGPKGIRGDS 192
>tr|B3Y964|B3Y964_LAMJA Fibrillar collagen (Fragment) OS=Lampetra japonica GN=LjColA PE=2 SV=1 Length = 681
Score = 37.4 bits (85), Expect = 0.38 Identities = 29/81 (35%), Positives = 35/81 (43%) Frame = +1
Query: 166 ETGC*GTAYTIGTPLTAGLGSSPGPGKGALVT*GPAIGEGWSGTGVPIVDPPGPTMGGQT 345 + G G G+P G PGP KGA GP+ G+ G V PPGP G Sbjct: 53 DAGAPGPQGPAGSPGPQGPNGVPGP-KGARGAQGPSGATGFPGAAGR-VGPPGPN--GNP 108
Query: 346 GAPKTVVPARFDGPGCVRTDA 408 G P P DGP +R D+ Sbjct: 109 GPPGPPGPGGKDGPKGIRGDS 129
>tr|B8I5G1|B8I5G1_CLOCE S-layer domain protein OS=Clostridium cellulolyticum H10 GN=Ccel_2364 PE=3 SV=1 Length = 1421
Score = 37.4 bits (85), Expect = 0.38 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +1
Query: 193 TIGTPLTAGLGSSPGPGKGALVT*GPAIGEGWSGTGVPIVDP-PGPTMGGQTGAPKTVVP 369 T T +TA G + G VT G ++ +G G P+V P P P GG +G T P Sbjct: 412 TPNTHITAAAGVTGATAGGVPVTGGTSVVNNSTGNGTPVVTPTPNPGNGGNSGGDNTTPP 471
>tr|Q10B16|Q10B16_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g61780 PE=4 SV=1 Length = 575
Score = 37.0 bits (84), Expect = 0.49 Identities = 29/76 (38%), Positives = 37/76 (48%) Frame = +1
Query: 157 AGWETGC*GTAYTIGTPLTAGLGSSPGPGKGALVT*GPAIGEGWSGTGVPIVDPPGPTMG 336 AG+ G GT P+ G G+ G G G GPA+G GTG V P GP +G Sbjct: 469 AGYSPGVTGTV-----PVGGGAGAGAGVGVGVTPM-GPAVG----GTGGAGVTPMGPAVG 518
Query: 337 GQTGAPKTVVPARFDG 384 G +G+ TV+ A G Sbjct: 519 GGSGS--TVLNANSPG 532
>tr|Q10B15|Q10B15_ORYSJ cDNA clone:002-149-C11, full insert sequence OS=Oryza sativa subsp. japonica GN=LOC_Os03g61780 PE=2 SV=1 Length = 574
Score = 37.0 bits (84), Expect = 0.49 Identities = 29/76 (38%), Positives = 37/76 (48%) Frame = +1
Query: 157 AGWETGC*GTAYTIGTPLTAGLGSSPGPGKGALVT*GPAIGEGWSGTGVPIVDPPGPTMG 336 AG+ G GT P+ G G+ G G G GPA+G GTG V P GP +G Sbjct: 468 AGYSPGVTGTV-----PVGGGAGAGAGVGVGVTPM-GPAVG----GTGGAGVTPMGPAVG 517
Query: 337 GQTGAPKTVVPARFDG 384 G +G+ TV+ A G Sbjct: 518 GGSGS--TVLNANSPG 531
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