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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916029
Clone id YMU001_000082_B08
Library
Length 455
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000082_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCCTCCTTTCTTCCTACTCACAAATGAGCAGTAAGCAAGAACCTTGGCCAGTCCAAAGAG
CCCCAAGAGTTCCCTCCTGCTCACAACCCTTCGTTCGATGGCCTAACACTTCTCCACCTT
CTCAAGGTACTTCTGTAGTTCTTCTCTCTTTGGTCATTTAAAAACATGCAGAGGGCTATG
CATCAAGAGCCGTCATTGAATATTGTTTTGGTCCGCGTCCCCCCCTCCAAGCCTTGTAAG
CATGGCAAAGATCCCATTGGGCTCCCAAAGGGTTGGAAGTGTGTACCACAGAGGCTTTAC
CCAACAACTTCTACATGTTTTTGCTCAAAGATGACAGCATGTCCATGAAGCTCCTTGGGG
TAGGTCAATGATGTTGCACCACTTTTTGGACTACCCAGCCTAGGTGGTCGCTCGACTTCT
CCCCCGACATCAAACACTCCCTCTTTCCGGTATCG
■■Homology search results ■■ -
sp_hit_id Q37979
Definition sp|Q37979|AEPE_BPA50 L-alanyl-D-glutamate peptidase OS=Listeria phage A500
Align length 47
Score (bit) 32.0
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916029|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_B08.
         (455 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q37979|AEPE_BPA50 L-alanyl-D-glutamate peptidase OS=Listeria ...    32   1.3  
sp|Q8R2K4|TAF6L_MOUSE TAF6-like RNA polymerase II p300/CBP-assoc...    31   2.2  
sp|Q7TT49|MRCKB_RAT Serine/threonine-protein kinase MRCK beta OS...    31   2.2  
sp|Q7TT50|MRCKB_MOUSE Serine/threonine-protein kinase MRCK beta ...    31   2.2  
sp|Q9Y6J9|TAF6L_HUMAN TAF6-like RNA polymerase II p300/CBP-assoc...    31   2.9  
sp|A7MCY6|TBKB1_HUMAN TANK-binding kinase 1-binding protein OS=H...    30   3.8  
sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated re...    30   6.4  
sp|Q5TA50|GLTD1_HUMAN Glycolipid transfer protein domain-contain...    29   8.4  

>sp|Q37979|AEPE_BPA50 L-alanyl-D-glutamate peptidase OS=Listeria
           phage A500 GN=ply PE=1 SV=1
          Length = 289

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -1

Query: 179 IALCMFLNDQREKNYRSTLRRWRSVRPSNEGL*AGGNSWGSLDWPRF 39
           + LC++ ND ++  + ST  RW+ V  + +   A G  WG  DW  F
Sbjct: 86  VDLCLYTNDGKDVIWESTTSRWKKVVAAMK---AEGFKWGG-DWKSF 128


>sp|Q8R2K4|TAF6L_MOUSE TAF6-like RNA polymerase II
           p300/CBP-associated factor-associated factor 65 kDa
           subunit 6L OS=Mus musculus GN=Taf6l PE=2 SV=1
          Length = 616

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +1

Query: 151 WSFKNMQRAMHQEPSLNIVLVRVPPSKP-CKHGKDPIGLPK-GWKCVPQRLYPTTST 315
           W+  ++   ++Q+  L++  V   P +P C H    +GL   GWK V + LYP   T
Sbjct: 276 WTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPT 332


>sp|Q7TT49|MRCKB_RAT Serine/threonine-protein kinase MRCK beta
            OS=Rattus norvegicus GN=Cdc42bpb PE=1 SV=1
          Length = 1713

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 3    LLSSYSQMSSKQEPWPVQRAPRVPSCSQPFVRWPNTSPPSQGTSVVLLSL 152
            L ++ +    KQ P P     ++PS ++P+V WP++     G  V L S+
Sbjct: 1611 LSAAPTAQEEKQGPAPTGLPRQLPSRNKPYVSWPSSGGSEPGVPVPLRSM 1660


>sp|Q7TT50|MRCKB_MOUSE Serine/threonine-protein kinase MRCK beta
            OS=Mus musculus GN=Cdc42bpb PE=1 SV=1
          Length = 1713

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 33   KQEPWPVQRAPRVPSCSQPFVRWPNTSPPSQGTSVVLLSL 152
            KQ P P     + PS S+P+V WP++     G  V L S+
Sbjct: 1621 KQGPTPAGLPRQPPSRSKPYVSWPSSGGSEPGVPVPLRSM 1660


>sp|Q9Y6J9|TAF6L_HUMAN TAF6-like RNA polymerase II
           p300/CBP-associated factor-associated factor 65 kDa
           subunit 6L OS=Homo sapiens GN=TAF6L PE=1 SV=1
          Length = 622

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +1

Query: 151 WSFKNMQRAMHQEPSLNIVLVRVPPSKP-CKHGKDPIGLPK-GWKCVPQRLYPTTST 315
           W+  ++   ++Q   L++  +   P +P C H    +GL   GWK V + LYP  ST
Sbjct: 276 WTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLST 332


>sp|A7MCY6|TBKB1_HUMAN TANK-binding kinase 1-binding protein OS=Homo
           sapiens GN=TBKBP1 PE=2 SV=1
          Length = 615

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 30  SKQEPWPVQRAPRVPSCSQPFVRWPNTSPPSQGT 131
           S Q P P +R+P  PSC  P  R P   PP + T
Sbjct: 405 SCQSPSPQRRSPVPPSCPAPQPRPPPPPPPGERT 438



 Score = 25.0 bits (53), Expect(2) = 9.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 42  PWPVQRAPRVPSCSQPFVRWPNTSPPS 122
           P P +R+P  PSC  P  +  +  PPS
Sbjct: 394 PVPQRRSPVPPSCQSPSPQRRSPVPPS 420



 Score = 22.3 bits (46), Expect(2) = 9.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 217 VPPSKPCKHGKDPIGLPKGWKCVPQRLY 300
           VPPS P    + P   P G + + +R Y
Sbjct: 417 VPPSCPAPQPRPPPPPPPGERTLAERAY 444


>sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated
           receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1
           SV=2
          Length = 615

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 20/62 (32%), Positives = 24/62 (38%)
 Frame = +2

Query: 215 ASPPPSLVSMAKIPLGSQRVGSVYHRGFTQQLLHVFAQR*QHVHEAPWGRSMMLHHFLDY 394
           ASPPP +      P GS R+      G       +FA     +  A W R     HF D 
Sbjct: 204 ASPPPPISPTPPSPAGSNRITGAIAGGVAAGAALLFAV--PAIALAWWRRKKPQDHFFDV 261

Query: 395 PA 400
           PA
Sbjct: 262 PA 263


>sp|Q5TA50|GLTD1_HUMAN Glycolipid transfer protein domain-containing
           protein 1 OS=Homo sapiens GN=GLTPD1 PE=1 SV=1
          Length = 214

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +3

Query: 12  SYSQMSSKQEPWPVQRAPRVPSCSQP----FVRWPNTSPPSQGTSVV 140
           SY+   +   PW V+RA  V  C+ P    F+   N  PP Q   ++
Sbjct: 141 SYNASLAAYHPWVVRRAVTVAFCTLPTREVFLEAMNVGPPEQAVQML 187
tr_hit_id A1D5E7
Definition tr|A1D5E7|A1D5E7_NEOFI Putative uncharacterized protein OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)
Align length 70
Score (bit) 37.4
E-value 0.38
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916029|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_B08.
         (455 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A1D5E7|A1D5E7_NEOFI Putative uncharacterized protein OS=Neosa...    37   0.38 
tr|A1L571|A1L571_BOVIN TAF6-like RNA polymerase II (Fragment) OS...    35   1.9  
tr|A6R0T0|A6R0T0_AJECN Predicted protein OS=Ajellomyces capsulat...    34   3.2  
tr|A5ETW5|A5ETW5_BRASB Putative Poly(3-hydroxyalkanoate) polymer...    26   9.1  
tr|A2R1H4|A2R1H4_ASPNC Contig An13c0060, complete genome OS=Aspe...    33   9.3  

>tr|A1D5E7|A1D5E7_NEOFI Putative uncharacterized protein
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=NFIA_023510 PE=4 SV=1
          Length = 884

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 20/70 (28%), Positives = 32/70 (45%)
 Frame = +2

Query: 182 IKSRH*ILFWSASPPPSLVSMAKIPLGSQRVGSVYHRGFTQQLLHVFAQR*QHVHEAPWG 361
           ++  H   +W++      + +  +  G+ RVG+++       LLHV  Q      E PWG
Sbjct: 505 VEEEHRFWYWTSLAWFGYLGLRWLTAGTSRVGAMF-----LPLLHVVGQSLNPAGETPWG 559

Query: 362 RSMMLHHFLD 391
               LH FLD
Sbjct: 560 AGTYLHSFLD 569


>tr|A1L571|A1L571_BOVIN TAF6-like RNA polymerase II (Fragment)
           OS=Bos taurus GN=TAF6L PE=2 SV=1
          Length = 291

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +1

Query: 151 WSFKNMQRAMHQEPSLNIVLVRVPPSKP-CKHGKDPIGLPK-GWKCVPQRLYPTTST 315
           W++ ++   ++Q+  L++  V   P +P C H    +GL   GWK V + LYP  ST
Sbjct: 101 WTYGDLVNGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLST 157


>tr|A6R0T0|A6R0T0_AJECN Predicted protein OS=Ajellomyces capsulata
           (strain NAm1 / WU24) GN=HCAG_03237 PE=4 SV=1
          Length = 1087

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +1

Query: 238 KHGKDPIGLPKGWKC----VPQRLYPTTSTCFCSKMTACP*SSLG*VNDVAPLFGLP 396
           + G+D  G P+ W+C    +P  + P+T +C+C K T           D  PL GLP
Sbjct: 249 QQGQDGHGHPRQWRCPGCNLPHDILPSTYSCWCEKET-----------DPRPLPGLP 294


>tr|A5ETW5|A5ETW5_BRASB Putative Poly(3-hydroxyalkanoate) polymerase
           family protein OS=Bradyrhizobium sp. (strain BTAi1 /
           ATCC BAA-1182) GN=BBta_7778 PE=4 SV=1
          Length = 509

 Score = 25.8 bits (55), Expect(2) = 9.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 183 SRAVIEYCFGPRPPLQAL*AW 245
           SRA+  Y  G RPP+  L AW
Sbjct: 322 SRALRSYLLGVRPPMNDLMAW 342



 Score = 25.8 bits (55), Expect(2) = 9.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 299 TQQLLHVFAQR*QHVHEAPWGRSMMLHHFLD 391
           T  L+ +FA   +  H APW     LHH  D
Sbjct: 382 TDILVPIFAVGTEKDHVAPWRSVFKLHHLTD 412


>tr|A2R1H4|A2R1H4_ASPNC Contig An13c0060, complete genome
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=An13g01240 PE=4 SV=1
          Length = 1158

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 4/26 (15%)
 Frame = +1

Query: 265 PKGWKC----VPQRLYPTTSTCFCSK 330
           P+ W+C    +PQ ++P+T TC+C K
Sbjct: 314 PRAWRCPGCNLPQEVFPSTYTCWCEK 339