BP916035
Clone id YMU001_000082_C05
Library
Length 451
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000082_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CATAAGACCCACAACAATAGGCCCTCAGAGACCCACTATGTGACTGAGATAATGTATATC
CCAGTCCTACAATAAATTCCCAATCACATGGTAAAATTTTGAAGATGGCTATACATCTGT
TGCACATATGGAGTACAACCGAAATTTGAAGATGGCGATACATCTGTTGCACATATGCAG
CAAGTATAGATATTCGTGCCTCATGGTAACCATACACATAACCATGTGTTGAATAGGGGC
AATGGTTTCAATCCAGAAACAAAAATCAATAGGAAGCTTCAATAAATGTTTATAGCTCTA
GCAGGCTACTGAACTTGACCAGTGTATACTTCTTGTTGAACACTTAAAACTCTTAACTGA
ACATCACTACGTTGGTGTCGTTGTCGTCGCCGCGGTACTCTCGTACTATACATCCACGGC
TTCTTGGGGACAGGAATAAACTTTACAAAGA
■■Homology search results ■■ -
sp_hit_id Q8TFZ1
Definition sp|Q8TFZ1|XRN2_ASPFU 5'-3' exoribonuclease 2 OS=Aspergillus fumigatus
Align length 52
Score (bit) 29.3
E-value 8.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916035|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_C05.
(451 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8TFZ1|XRN2_ASPFU 5'-3' exoribonuclease 2 OS=Aspergillus fumi... 29 8.2

>sp|Q8TFZ1|XRN2_ASPFU 5'-3' exoribonuclease 2 OS=Aspergillus
fumigatus GN=rat1 PE=3 SV=4
Length = 1058

Score = 29.3 bits (64), Expect = 8.2
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1

Query: 127 YGVQPKFEDGDTSVAHMQQV*IFVPHGNHTHNHVLNRGNGFNPETKINRKLQ 282
YG+ P ED + + + +P NH H +L RG FNP N +Q
Sbjct: 830 YGM-PSLEDDRSLTVNYE-----IPKSNHVHKSMLLRGVKFNPPALDNADIQ 875


tr_hit_id Q9XTF8
Definition tr|Q9XTF8|Q9XTF8_CAEEL Protein VF11C1L.1, partially confirmed by transcript evidence OS=Caenorhabditis elegans
Align length 88
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916035|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_C05.
(451 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9XTF8|Q9XTF8_CAEEL Protein VF11C1L.1, partially confirmed by... 33 9.3

>tr|Q9XTF8|Q9XTF8_CAEEL Protein VF11C1L.1, partially confirmed by
transcript evidence OS=Caenorhabditis elegans GN=ppk-3
PE=4 SV=3
Length = 1497

Score = 32.7 bits (73), Expect = 9.3
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = -2

Query: 342 CSTRSIHWSSSVAC*SYKHLLKLPIDFCFWIETIAPIQHMVMCMVTMRHEYLYLLHMCN- 166
CS++ + + ++ S+ L+ + CF +TI PI + C HE LY M N
Sbjct: 914 CSSQMVKFDKAIWHLSFAKFLEYIGNSCFTTDTIYPITNQNQCSHCFFHEKLYFFAMDNL 973

Query: 165 -RCIAIFKFRLYSICATDV*PSSKFYHV 85
+ R YS+ + + S K V
Sbjct: 974 VTTFKVIAIRPYSVVFSPIICSVKVLKV 1001