BP916042 |
Clone id |
YMU001_000082_D03 |
Library |
YMU01 |
Length |
394 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000082_D03. |
Accession |
BP916042 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1997Contig1 |
Sequence |
ATCACCATATTCATACAAAACGCCCAACCTTTTGCTGGCCTATCTGAACCTGTCCAAGAA ATCCTCAAGAGTCCTATATGAAAAGTGTGAGGGTTGATCGTGCAGCGATCGGGCTGACAT ATAGAAAATTAGCCATAAAACCAGAAAATACATCTGAGCTAGACAAATAACAGAAGCCGC AGCAAACTGACCGATTACATGCTGAAGCAGCCACCGAGCTGTCCGCCCACAAACTGCTGC CTCGATAAGCCGAATCACCAAAGCCTGCCATTTCATGCCTTTAACCAGGTTGCCACTTCT GGTCACAGCTCCAAGCCCCCAATAGTTTCTCTCCAAGATGGTTACCCAGCATGCGATCAT GTAGATGCAATATGCAACACTATCGAATAAGTAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q86KH4 |
Definition |
sp|Q86KH4|Y8830_DICDI Putative uncharacterized protein DDB_G0272516 OS=Dictyostelium discoideum |
Align length |
65 |
Score (bit) |
34.3 |
E-value |
0.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S6L5 |
Definition |
tr|A9S6L5|A9S6L5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
117 |
Score (bit) |
127.0 |
E-value |
4.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916042|Adiantum capillus-veneris mRNA, clone: YMU001_000082_D03. (394 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S6L5|A9S6L5_PHYPA Predicted protein OS=Physcomitrella paten... 127 4e-28 tr|A7PT51|A7PT51_VITVI Chromosome chr8 scaffold_29, whole genome... 70 7e-11 tr|A5AUN8|A5AUN8_VITVI Putative uncharacterized protein OS=Vitis... 70 7e-11 tr|B6U027|B6U027_MAIZE Putative uncharacterized protein OS=Zea m... 57 6e-07 tr|A2Z8K2|A2Z8K2_ORYSI Putative uncharacterized protein OS=Oryza... 54 4e-06 tr|Q7XDC6|Q7XDC6_ORYSJ Os10g0478400 protein OS=Oryza sativa subs... 54 5e-06 tr|Q9FWH4|Q9FWH4_ORYSA Putative uncharacterized protein OSJNBa00... 51 3e-05 tr|A9P252|A9P252_PICSI Putative uncharacterized protein OS=Picea... 42 0.012 tr|B8LMV5|B8LMV5_PICSI Putative uncharacterized protein OS=Picea... 35 2.4 tr|A4HSS2|A4HSS2_LEIIN Pteridine transporter, putative OS=Leishm... 35 2.4 tr|O48574|O48574_ARATH T19K24.3 protein (Putative uncharacterize... 34 3.2 tr|Q9SF17|Q9SF17_ARATH F26K24.10 protein OS=Arabidopsis thaliana... 34 4.1 tr|Q4QJ48|Q4QJ48_LEIMA Pteridine transporter, putative OS=Leishm... 34 4.1 tr|B6KP81|B6KP81_TOXGO ATP-dependent DNA helicase, putative OS=T... 34 4.1 tr|A9G3N2|A9G3N2_9RHOB Putative uncharacterized protein OS=Phaeo... 33 5.4 tr|Q3EBL4|Q3EBL4_ARATH Uncharacterized protein At2g37035.1 OS=Ar... 33 5.4 tr|B7QWG3|B7QWG3_9RHOB Integral membrane protein DUF6 OS=Ruegeri... 33 7.1 tr|B2WKH2|B2WKH2_PYRTR Putative uncharacterized protein OS=Pyren... 33 9.2
>tr|A9S6L5|A9S6L5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163120 PE=4 SV=1 Length = 488
Score = 127 bits (318), Expect = 4e-28 Identities = 54/117 (46%), Positives = 78/117 (66%) Frame = -2
Query: 393 YLFDSVAYCIYMIACWVTILERNYWGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTAR 214 Y+ + CIY++ACWVTI+ER YWG A++R LV M+ Q L ++L+E+ +CGR+AR Sbjct: 372 YMLEGAISCIYVMACWVTIMERQYWGFSALSRGWKLVSNMQHQVLAVKLLESILCGRSAR 431
Query: 213 WLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSARSLHDQPSHFSYRTLEDFLDRFR 43 W+L +G F + V+ + Q+YF++ WL+ Y+SAR D FS LEDFLDR R Sbjct: 432 WVLSQFMGPFLSMLVVSVGQLYFIICWLVLYLSARCKLDTNPRFSLGVLEDFLDRVR 488
>tr|A7PT51|A7PT51_VITVI Chromosome chr8 scaffold_29, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023214001 PE=4 SV=1 Length = 461
Score = 69.7 bits (169), Expect = 7e-11 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 2/119 (1%) Frame = -2
Query: 393 YLFDSVAYCIYMIACWVTILERNYWGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTAR 214 +L+D++ I+ + WV I++ G V L+ M QA+ I+ +EA CG R Sbjct: 343 FLWDTLVSFIFAVDAWVAIVDTRRSGRDIVREGVYLLSTMLNQAIQIKCLEAIFCGSFVR 402
Query: 213 WLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSARS--LHDQPSHFSYRTLEDFLDRFR 43 W L G+ AA + ++YF+V WLIFY +AR + F R LE F++ R Sbjct: 403 WALARFCGKLFAAVFQSVVEVYFMVAWLIFYFAARCRVASTEGRRFGRRELEGFIEGLR 461
>tr|A5AUN8|A5AUN8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033047 PE=4 SV=1 Length = 471
Score = 69.7 bits (169), Expect = 7e-11 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 2/119 (1%) Frame = -2
Query: 393 YLFDSVAYCIYMIACWVTILERNYWGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTAR 214 +L+D++ I+ + WV I++ G V L+ M QA+ I+ +EA CG R Sbjct: 353 FLWDTLVSFIFAVDAWVAIVDTRRSGRDIVREGVYLLSTMLNQAIQIKCLEAIFCGSFVR 412
Query: 213 WLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSARS--LHDQPSHFSYRTLEDFLDRFR 43 W L G+ AA + ++YF+V WLIFY +AR + F R LE F++ R Sbjct: 413 WALARFCGKLFAAVFQSVVEVYFMVAWLIFYFAARCRVASTEGRRFGRRELEGFIEGLR 471
>tr|B6U027|B6U027_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 173
Score = 56.6 bits (135), Expect = 6e-07 Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 2/96 (2%) Frame = -2
Query: 390 LFDSVAYCIYMIACWVTILERNYW--GLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTA 217 +FD+V ++ + WV +++R+ G AV LV M A +++ E VCG Sbjct: 54 VFDAVVSVLFTVVPWVVVMDRDPRPPGRNAVKEGCYLVSLMATDATMLKCWETVVCGSMG 113
Query: 216 RWLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSAR 109 R ++ G+ + +AQ+YF+V+WL+FY +AR Sbjct: 114 RLIMVTFGGKVFGGFLHSIAQVYFMVVWLLFYFAAR 149
>tr|A2Z8K2|A2Z8K2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34039 PE=4 SV=1 Length = 331
Score = 53.9 bits (128), Expect = 4e-06 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 4/120 (3%) Frame = -2
Query: 390 LFDSVAYCIYMIACWVTILERNYW--GLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTA 217 L D+V ++ + WV +++R+ G AV LV M A +I+ + VCG Sbjct: 211 LLDAVVSVLFTVVPWVVVMDRDPRPPGRNAVKEGCYLVSLMATDATLIKCWQTVVCGSMG 270
Query: 216 RWLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSAR--SLHDQPSHFSYRTLEDFLDRFR 43 + + + G+ + + ++YF+V+WL+FY SAR + HF + LD FR Sbjct: 271 QLAMVTLGGKVLGGFLHSIGEVYFMVVWLMFYFSARCKEVRLGGRHFGLEDVAAALDGFR 330
>tr|Q7XDC6|Q7XDC6_ORYSJ Os10g0478400 protein OS=Oryza sativa subsp. japonica GN=Os10g0478400 PE=4 SV=2 Length = 457
Score = 53.5 bits (127), Expect = 5e-06 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 4/120 (3%) Frame = -2
Query: 390 LFDSVAYCIYMIACWVTILERNYW--GLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTA 217 L D+V ++ + WV +++R+ G AV LV M A +I+ + VCG Sbjct: 337 LLDAVVSVLFTVVPWVIVMDRDPRPPGRNAVKEGCYLVSLMATDATLIKCWQTVVCGSMG 396
Query: 216 RWLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSAR--SLHDQPSHFSYRTLEDFLDRFR 43 + + + G+ + + ++YF+V+WL+FY SAR + HF + LD FR Sbjct: 397 QLAMVTLGGKVLGGFLHSIGEVYFMVVWLMFYFSARCKEVRLGGRHFGLEDVAAALDGFR 456
>tr|Q9FWH4|Q9FWH4_ORYSA Putative uncharacterized protein OSJNBa0055P24.5 OS=Oryza sativa GN=OSJNBa0055P24.5 PE=4 SV=1 Length = 460
Score = 51.2 bits (121), Expect = 3e-05 Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 2/96 (2%) Frame = -2
Query: 390 LFDSVAYCIYMIACWVTILERNYW--GLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTA 217 L D+V ++ + WV +++R+ G AV LV M A +I+ + VCG Sbjct: 337 LLDAVVSVLFTVVPWVIVMDRDPRPPGRNAVKEGCYLVSLMATDATLIKCWQTVVCGSMG 396
Query: 216 RWLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSAR 109 + + + G+ + + ++YF+V+WL+FY SAR Sbjct: 397 QLAMVTLGGKVLGGFLHSIGEVYFMVVWLMFYFSAR 432
>tr|A9P252|A9P252_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 344
Score = 42.4 bits (98), Expect = 0.012 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 14/105 (13%) Frame = -2
Query: 366 IYMIACWVTILERNYWGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTARWLLQHVI-- 193 ++ +AC +++LE Y GLGA+ +S NL+KG + ALV+ ++ G + +V+ Sbjct: 206 VWHLACVISVLEDKY-GLGAMQKSWNLIKGNRITALVLDILYLVFVGIIGWFFGYYVLHG 264
Query: 192 --------GQFAAASV----ICLAQMYFLVLWLIFYMSARSLHDQ 94 G+ A +V +C A + L+ +FY +S H + Sbjct: 265 NRHGAGSTGRGAYGTVLVGLLCFAHLMGLLTQSVFYFVCKSYHHE 309
>tr|B8LMV5|B8LMV5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 333
Score = 34.7 bits (78), Expect = 2.4 Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 13/103 (12%) Frame = -2
Query: 363 YMIACWVTILERNYWGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTARW--------- 211 +++A + + E + WGL + RS LVKGM+ + + L A A W Sbjct: 200 WVLASVIPVAEGS-WGLEPLRRSSYLVKGMRRMSFSLNLFFAIAGLVLALWANYLQSSAS 258
Query: 210 ----LLQHVIGQFAAASVICLAQMYFLVLWLIFYMSARSLHDQ 94 LL ++ + + + +Y + +FYM ++ HD+ Sbjct: 259 DSLDLLSKIVQSITVLAAMAVLFLYNIATNTVFYMYCKAHHDE 301
>tr|A4HSS2|A4HSS2_LEIIN Pteridine transporter, putative OS=Leishmania infantum GN=LinJ06.0310 PE=4 SV=1 Length = 677
Score = 34.7 bits (78), Expect = 2.4 Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 5/96 (5%) Frame = -2
Query: 348 WVTILERNYWGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTARWLLQHVIGQFAAASV 169 W + + +T + G +WQ L + CG A W L +I + + Sbjct: 380 WRIFVYSSLMACSVITMMCVTILGTRWQLLYSCIAVVLACGACAFWALPFLIAKVS---- 435
Query: 168 ICLAQMYFLVLWL-----IFYMSARSLHDQPSHFSY 76 I FL L L FYM+++ + + HFSY Sbjct: 436 IYFFSYAFLYLQLPGALDSFYMASKECYPEGPHFSY 471
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