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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916045
Clone id YMU001_000082_D06
Library
Length 428
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000082_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GACAAATGTGTTGAAATTATGAGAAAGAATTTGTCAGAGTCAGCAATGACTGGCTATAAA
AGAATGTACCATTTGCCTTTATTATCCAGAGTTTTATAATTAGCTGCAGGGGTCAATACA
CAAATCGTCGTGATTACTATCCTGCAAAGAATAGAGTTCTGTGCAATTTGATAATAGATC
AAGGGATCCATCCATCTGCATGGGAATTCTCCGACTTGCAATCTTCTATGCTTTGCCTTC
TCCAGATGAATATTGTGAAGAACTAAAGAGCTTTAGTTTCTCTGCGATGACCATCTTCAT
TGCTTCTTCAGCAAATGACAGTGTGTCCAGAAGATCCTTCTTGGGTTCCTTCAGTGCAGT
GACATAAGCTGACCGTACCTCAGTATTGACATTGAACTTGCGAACGCCGTTCTTGATACA
TTCCTTTA
■■Homology search results ■■ -
sp_hit_id Q9XDP3
Definition sp|Q9XDP3|ALF_NOSCO Fructose-bisphosphate aldolase OS=Nostoc commune
Align length 64
Score (bit) 31.2
E-value 1.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916045|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_D06.
         (428 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9XDP3|ALF_NOSCO Fructose-bisphosphate aldolase OS=Nostoc com...    31   1.8  
sp|P30235|YEIC_ECOLI Uncharacterized sugar kinase yeiC OS=Escher...    31   2.4  
sp|Q04746|KAR5_YEAST Nuclear fusion protein KAR5 OS=Saccharomyce...    30   3.1  
sp|A6ZMC4|KAR5_YEAS7 Nuclear fusion protein KAR5 OS=Saccharomyce...    30   3.1  
sp|Q5DRQ8|FCRLB_MOUSE Fc receptor-like B OS=Mus musculus GN=Fcrl...    30   5.3  
sp|Q9UT96|YL43_SCHPO Uncharacterized protein C323.03c OS=Schizos...    29   7.0  
sp|P22579|SIN3_YEAST Transcriptional regulatory protein SIN3 OS=...    29   7.0  
sp|Q6BAA4|FCRLB_HUMAN Fc receptor-like B OS=Homo sapiens GN=FCRL...    29   7.0  
sp|Q55664|ALF2_SYNY3 Fructose-bisphosphate aldolase class 2 OS=S...    29   7.0  
sp|P06014|VSI6_TRYBB Variant surface glycoprotein ILTAT 1.3 OS=T...    29   9.1  

>sp|Q9XDP3|ALF_NOSCO Fructose-bisphosphate aldolase OS=Nostoc
           commune GN=fba PE=3 SV=1
          Length = 359

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
 Frame = -3

Query: 417 IKNGVRKFNVNTEVRSAYVTALKE---PKKDLLDTLSFAEEA---MKMVIAEKLKLFSSS 256
           IK+GVRK N++T+ R A   A++E    K +  D   F + +   M+ V AE+ + F ++
Sbjct: 267 IKSGVRKVNIDTDNRLAITAAVREACAKKPEEFDPRHFLKPSITYMQKVCAERYQQFGTA 326

Query: 255 QYSS 244
             +S
Sbjct: 327 GNAS 330


>sp|P30235|YEIC_ECOLI Uncharacterized sugar kinase yeiC
           OS=Escherichia coli (strain K12) GN=yeiC PE=3 SV=2
          Length = 313

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -2

Query: 94  KLWIIKANGTFFYSQSLLTLTN 29
           K W++ A G+ FY QSLLT TN
Sbjct: 56  KAWLLSAVGSDFYGQSLLTQTN 77


>sp|Q04746|KAR5_YEAST Nuclear fusion protein KAR5 OS=Saccharomyces
           cerevisiae GN=KAR5 PE=1 SV=1
          Length = 504

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
 Frame = -3

Query: 423 ECIKNGVRKFNVNTEVRSAYVTALKE---------PKKDLLDTLSFAEEAMKMVIAEKLK 271
           +CI NG+   +  T V +A   ++ E         P+  ++D L    + M        +
Sbjct: 67  QCIANGLESIDAETRVETAIKLSICEFQASGLGEIPENCMVDDLGSMMDCM-------FE 119

Query: 270 LFSSSQ-YSSGEGKA*KIAS----RRIPMQMDGSLDLLSNCTELYSLQDSNHDDL 121
           L SSSQ +++  G   +++S      +P + +  L L  N TELY   DS  DD+
Sbjct: 120 LESSSQWWTTYSGNYQRLSSICYENLLPFEKEQILKLFLNITELY---DSFGDDV 171


>sp|A6ZMC4|KAR5_YEAS7 Nuclear fusion protein KAR5 OS=Saccharomyces
           cerevisiae (strain YJM789) GN=KAR5 PE=2 SV=1
          Length = 504

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
 Frame = -3

Query: 423 ECIKNGVRKFNVNTEVRSAYVTALKE---------PKKDLLDTLSFAEEAMKMVIAEKLK 271
           +CI NG+   +  T V +A   ++ E         P+  ++D L    + M        +
Sbjct: 67  QCIANGLESIDAETRVETAIKLSICEFQASGLGEIPENCMVDDLGSMMDCM-------FE 119

Query: 270 LFSSSQ-YSSGEGKA*KIAS----RRIPMQMDGSLDLLSNCTELYSLQDSNHDDL 121
           L SSSQ +++  G   +++S      +P + +  L L  N TELY   DS  DD+
Sbjct: 120 LESSSQWWTTYSGNYQRLSSICYENLLPFEKEQILKLFLNITELY---DSFGDDV 171


>sp|Q5DRQ8|FCRLB_MOUSE Fc receptor-like B OS=Mus musculus GN=Fcrlb
           PE=2 SV=1
          Length = 427

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +3

Query: 39  VSNDWL*KNVPFAFIIQS--FIISCRGQY 119
           VSNDWL   VP+A + +    ++ CRG Y
Sbjct: 100 VSNDWLILQVPYAAVFEGEPLVMRCRGWY 128


>sp|Q9UT96|YL43_SCHPO Uncharacterized protein C323.03c
           OS=Schizosaccharomyces pombe GN=SPAC323.03c PE=2 SV=1
          Length = 575

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 197 RWMDPLIYYQIAQNSILCRIVITTICVLTPAANYKTLDN 81
           +W  P+I Y+     I  +  I+ + VL PAA  + L N
Sbjct: 489 KWFQPIIRYEFDNALIFYKASISLVSVLAPAAQKQFLSN 527


>sp|P22579|SIN3_YEAST Transcriptional regulatory protein SIN3
            OS=Saccharomyces cerevisiae GN=SIN3 PE=1 SV=2
          Length = 1536

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
 Frame = -3

Query: 366  YVTALKEPKKDLL-DTLSFAEEAMKMVIAEKLK--LFSSSQY---SSGEGKA*KIASRRI 205
            + TA   P K+ L D L +       +  EK++  L+S  Q    SSG      IASR+ 
Sbjct: 998  HTTAYSNPDKERLKDLLKYFISLFFSISFEKIEESLYSHKQNVSESSGSDDGSSIASRKR 1057

Query: 204  PMQMDGSLDLLSNCTELYSLQDSNHDD 124
            P Q + SL  + + +    L+ SN +D
Sbjct: 1058 PYQQEMSLLDILHRSRYQKLKRSNDED 1084


>sp|Q6BAA4|FCRLB_HUMAN Fc receptor-like B OS=Homo sapiens GN=FCRLB
           PE=1 SV=1
          Length = 426

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +3

Query: 39  VSNDWL*KNVPFAFIIQS--FIISCRGQY 119
           VSNDWL   VP+A + +    ++ CRG Y
Sbjct: 100 VSNDWLILQVPYAPVFEGEPLVLRCRGWY 128


>sp|Q55664|ALF2_SYNY3 Fructose-bisphosphate aldolase class 2
           OS=Synechocystis sp. (strain PCC 6803) GN=fbaA PE=1 SV=3
          Length = 359

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
 Frame = -3

Query: 417 IKNGVRKFNVNTEVRSAYVTAL-----KEPKK-DLLDTLSFAEEAMKMVIAEKLKLF 265
           IK+GVRK N++T+ R A   A      K+PK  D    L  + + MK V A++ + F
Sbjct: 267 IKSGVRKVNIDTDNRLAITAAFREAAAKDPKNFDPRHFLKPSIKYMKQVCADRYQQF 323


>sp|P06014|VSI6_TRYBB Variant surface glycoprotein ILTAT 1.3
           OS=Trypanosoma brucei brucei PE=2 SV=1
          Length = 503

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
 Frame = -3

Query: 396 FNVNTEVRSAYVTALKE-----PKKD----LLDTLSFAEEAMKMVIAEKLKLFSS 259
           F ++  V SAYVTA+KE     P KD      +    +EE ++  +A +++  SS
Sbjct: 322 FKIDANVNSAYVTAMKEISMDVPTKDGETQKKELFEMSEEDLEAALAVEIRRLSS 376
tr_hit_id Q652S1
Definition tr|Q652S1|Q652S1_ORYSJ Fructose-bisphosphate aldolase OS=Oryza sativa subsp. japonica
Align length 57
Score (bit) 77.8
E-value 3.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916045|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_D06.
         (428 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q652S1|Q652S1_ORYSJ Fructose-bisphosphate aldolase OS=Oryza s...    78   3e-13
tr|A3BAF0|A3BAF0_ORYSJ Fructose-bisphosphate aldolase OS=Oryza s...    78   3e-13
tr|B8B0B8|B8B0B8_ORYSI Putative uncharacterized protein OS=Oryza...    77   3e-13
tr|B8A3Q6|B8A3Q6_MAIZE Putative uncharacterized protein OS=Zea m...    77   4e-13
tr|A7PHA2|A7PHA2_VITVI Fructose-bisphosphate aldolase OS=Vitis v...    73   6e-12
tr|Q9LPP8|Q9LPP8_ARATH Fructose-bisphosphate aldolase OS=Arabido...    73   8e-12
tr|Q9LM23|Q9LM23_ARATH Fructose-bisphosphate aldolase OS=Arabido...    73   8e-12
tr|Q8VYC5|Q8VYC5_ARATH Fructose-bisphosphate aldolase OS=Arabido...    73   8e-12
tr|B3H739|B3H739_ARATH Uncharacterized protein At1g18270.2 OS=Ar...    73   8e-12
tr|A9SYE4|A9SYE4_PHYPA Fructose-bisphosphate aldolase OS=Physcom...    71   3e-11
tr|B8HVN7|B8HVN7_9CHRO Ketose-bisphosphate aldolase OS=Cyanothec...    55   1e-06
tr|A8YNS2|A8YNS2_MICAE Fructose-bisphosphate aldolase OS=Microcy...    50   6e-05
tr|Q7NHK2|Q7NHK2_GLOVI Fructose-bisphosphate aldolase OS=Gloeoba...    50   7e-05
tr|B2A3J6|B2A3J6_NATTJ Fructose-bisphosphate aldolase OS=Natrana...    45   0.002
tr|Q1IR85|Q1IR85_ACIBL Fructose-bisphosphate aldolase OS=Acidoba...    42   0.012
tr|B3W875|B3W875_LACCB Fructose-bisphosphate aldolase OS=Lactoba...    41   0.034
tr|B1XRY0|B1XRY0_POLNS Fructose-bisphosphate aldolase, class II,...    40   0.077
tr|B1BC13|B1BC13_CLOBO Class II aldolase, tagatose bisphosphate ...    39   0.13 
tr|A4SZW4|A4SZW4_POLSQ Fructose-bisphosphate aldolase OS=Polynuc...    39   0.17 
tr|A5LIJ4|A5LIJ4_9BACI Fructose-bisphosphate aldolase (Fragment)...    38   0.29 
tr|B5XKL5|B5XKL5_STRPZ Transcriptional regulator, GntR family OS...    37   0.38 
tr|A6T1Y9|A6T1Y9_JANMA Fructose-bisphosphate aldolase OS=Janthin...    37   0.38 
tr|A5E992|A5E992_BRASB Fructose-bisphosphate aldolase OS=Bradyrh...    37   0.50 
tr|Q3Y0L8|Q3Y0L8_ENTFC Fructose-bisphosphate aldolase OS=Enteroc...    37   0.50 
tr|B8CZ32|B8CZ32_9FIRM Fructose-1,6-bisphosphate aldolase, class...    37   0.50 
tr|Q01ZL2|Q01ZL2_SOLUE Fructose-bisphosphate aldolase OS=Solibac...    37   0.65 
tr|A4G894|A4G894_HERAR Fructose-bisphosphate aldolase OS=Hermini...    37   0.65 
tr|A0Q2D6|A0Q2D6_CLONN Class II aldolase, tagatose bisphosphate ...    37   0.65 
tr|Q9A0L8|Q9A0L8_STRP1 Putative transcriptional regulator (GntR ...    36   0.85 
tr|A5ZM49|A5ZM49_9FIRM Fructose-bisphosphate aldolase OS=Ruminoc...    36   0.85 

>tr|Q652S1|Q652S1_ORYSJ Fructose-bisphosphate aldolase OS=Oryza sativa
            subsp. japonica GN=P0603C10.39-1 PE=2 SV=1
          Length = 1376

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 36/57 (63%), Positives = 48/57 (84%)
 Frame = -3

Query: 426  KECIKNGVRKFNVNTEVRSAYVTALKEPKKDLLDTLSFAEEAMKMVIAEKLKLFSSS 256
            KECI  GVRKFNVNTEVR++Y+ +LK P+KDL+  ++ A+EAMK V+AEK++LF SS
Sbjct: 1317 KECIALGVRKFNVNTEVRNSYLESLKRPEKDLIHVMASAKEAMKAVVAEKMRLFGSS 1373


>tr|A3BAF0|A3BAF0_ORYSJ Fructose-bisphosphate aldolase OS=Oryza sativa
            subsp. japonica GN=OsJ_020022 PE=3 SV=1
          Length = 1385

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 36/57 (63%), Positives = 48/57 (84%)
 Frame = -3

Query: 426  KECIKNGVRKFNVNTEVRSAYVTALKEPKKDLLDTLSFAEEAMKMVIAEKLKLFSSS 256
            KECI  GVRKFNVNTEVR++Y+ +LK P+KDL+  ++ A+EAMK V+AEK++LF SS
Sbjct: 1326 KECIALGVRKFNVNTEVRNSYLESLKRPEKDLIHVMASAKEAMKAVVAEKMRLFGSS 1382


>tr|B8B0B8|B8B0B8_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_22435 PE=4 SV=1
          Length = 1376

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 35/57 (61%), Positives = 48/57 (84%)
 Frame = -3

Query: 426  KECIKNGVRKFNVNTEVRSAYVTALKEPKKDLLDTLSFAEEAMKMVIAEKLKLFSSS 256
            KEC+  GVRKFNVNTEVR++Y+ +LK P+KDL+  ++ A+EAMK V+AEK++LF SS
Sbjct: 1317 KECVALGVRKFNVNTEVRNSYLESLKRPEKDLIHVMASAKEAMKAVVAEKMRLFGSS 1373


>tr|B8A3Q6|B8A3Q6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 181

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 35/56 (62%), Positives = 48/56 (85%)
 Frame = -3

Query: 426 KECIKNGVRKFNVNTEVRSAYVTALKEPKKDLLDTLSFAEEAMKMVIAEKLKLFSS 259
           KECI  GVRKFNVNTEVR++Y+ +L++P+KDL+  ++ A+EAMK V+AEKL+LF S
Sbjct: 122 KECIDLGVRKFNVNTEVRNSYLASLRKPEKDLIQVMASAKEAMKAVVAEKLRLFGS 177


>tr|A7PHA2|A7PHA2_VITVI Fructose-bisphosphate aldolase OS=Vitis
            vinifera GN=GSVIVT00017865001 PE=3 SV=1
          Length = 1356

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = -3

Query: 426  KECIKNGVRKFNVNTEVRSAYVTALKEPKKDLLDTLSFAEEAMKMVIAEKLKLFSSS 256
            KECI+ GV KFNVNTEVR AY+ +L  P KDL+  +S A+EAMK V+AEK+ LF S+
Sbjct: 1297 KECIERGVTKFNVNTEVRKAYMESLSSPGKDLVHVMSNAKEAMKAVVAEKMHLFGSA 1353


>tr|Q9LPP8|Q9LPP8_ARATH Fructose-bisphosphate aldolase
           OS=Arabidopsis thaliana PE=3 SV=1
          Length = 278

 Score = 72.8 bits (177), Expect = 8e-12
 Identities = 36/58 (62%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
 Frame = -3

Query: 426 KECIKNGVRKFNVNTEVRSAYVTALKEPKK-DLLDTLSFAEEAMKMVIAEKLKLFSSS 256
           KECI+NGVRKFNVNTEVR+AY+ AL   KK D++D +S  + AMK VIA+K++LF S+
Sbjct: 218 KECIENGVRKFNVNTEVRTAYMEALSSGKKTDIVDVMSATKAAMKAVIADKIRLFGSA 275


>tr|Q9LM23|Q9LM23_ARATH Fructose-bisphosphate aldolase OS=Arabidopsis
            thaliana PE=3 SV=1
          Length = 1486

 Score = 72.8 bits (177), Expect = 8e-12
 Identities = 36/58 (62%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
 Frame = -3

Query: 426  KECIKNGVRKFNVNTEVRSAYVTALKEPKK-DLLDTLSFAEEAMKMVIAEKLKLFSSS 256
            KECI+NGVRKFNVNTEVR+AY+ AL   KK D++D +S  + AMK VIA+K++LF S+
Sbjct: 1426 KECIENGVRKFNVNTEVRTAYMEALSSGKKTDIVDVMSATKAAMKAVIADKIRLFGSA 1483


>tr|Q8VYC5|Q8VYC5_ARATH Fructose-bisphosphate aldolase OS=Arabidopsis
            thaliana GN=At1g18270 PE=2 SV=1
          Length = 1373

 Score = 72.8 bits (177), Expect = 8e-12
 Identities = 36/58 (62%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
 Frame = -3

Query: 426  KECIKNGVRKFNVNTEVRSAYVTALKEPKK-DLLDTLSFAEEAMKMVIAEKLKLFSSS 256
            KECI+NGVRKFNVNTEVR+AY+ AL   KK D++D +S  + AMK VIA+K++LF S+
Sbjct: 1313 KECIENGVRKFNVNTEVRTAYMEALSSGKKTDIVDVMSATKAAMKAVIADKIRLFGSA 1370


>tr|B3H739|B3H739_ARATH Uncharacterized protein At1g18270.2
            OS=Arabidopsis thaliana GN=At1g18270 PE=4 SV=1
          Length = 1374

 Score = 72.8 bits (177), Expect = 8e-12
 Identities = 36/58 (62%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
 Frame = -3

Query: 426  KECIKNGVRKFNVNTEVRSAYVTALKEPKK-DLLDTLSFAEEAMKMVIAEKLKLFSSS 256
            KECI+NGVRKFNVNTEVR+AY+ AL   KK D++D +S  + AMK VIA+K++LF S+
Sbjct: 1314 KECIENGVRKFNVNTEVRTAYMEALSSGKKTDIVDVMSATKAAMKAVIADKIRLFGSA 1371


>tr|A9SYE4|A9SYE4_PHYPA Fructose-bisphosphate aldolase
            OS=Physcomitrella patens subsp. patens
            GN=PHYPADRAFT_189760 PE=3 SV=1
          Length = 1193

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 34/57 (59%), Positives = 43/57 (75%)
 Frame = -3

Query: 426  KECIKNGVRKFNVNTEVRSAYVTALKEPKKDLLDTLSFAEEAMKMVIAEKLKLFSSS 256
            K CI+ GVRKFNVNTEVR AY+ AL  PKKDL+D +  +  AM+ V AEK+++F SS
Sbjct: 1133 KACIERGVRKFNVNTEVRGAYMQALGAPKKDLVDVMKSSVAAMQAVAAEKMQIFGSS 1189