BP916046
Clone id YMU001_000082_D07
Library
Length 443
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000082_D07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CACACATGATCAGCTGCAAAGTACACATGACGCTGCTTCCCGCTACATAATGAACAGAAA
TAAACAATATCGATGTCCGTAAAAGAATGTCGATGATAATGCCGATGCCGATAGTGATGA
GAATATTGTGCTCAAGTAAAGCCTGCCGTGGCTGATTCATCTCTCGCGAACGGTGGCTGC
ATGTGACTGTACACCTCGAATGATCACCAGCCGTTTGATATTGGGGCAGCATTCAAATTA
ATAGGCAGGTGCGGTGCGCCTTCCTCTTTTTATCCACCGAAATCAAGCAGGCAGAGTAGA
GTCCGTTCGCTGCTGGCTTCATTCCACCGGCCATAACAGCACCAGCCGTTGGCCCGTTGG
CCTCTAATTAGGAGGAGATAAGCATTTCGCAGCGCCGGCCAGCAATCACGAGTCATATCG
GCGTGCGTGTGAAAGGAAGGCCC
■■Homology search results ■■ -
sp_hit_id Q9DGB9
Definition sp|Q9DGB9|VMV1_CROAT Zinc metalloproteinase-disintegrin VAP1 OS=Crotalus atrox
Align length 63
Score (bit) 30.4
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916046|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_D07.
(443 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9DGB9|VMV1_CROAT Zinc metalloproteinase-disintegrin VAP1 OS=... 30 3.4
sp|Q8AWI5|VMHA_AGKHP Zinc metalloprotease-disintegrin halysase O... 30 3.4
sp|Q1PS45|VMAG_AGKAC Zinc metalloprotease-disintegrin agkihagin ... 30 5.9
sp|Q8ZM03|YGIQ_SALTY UPF0313 protein ygiQ OS=Salmonella typhimur... 29 10.0
sp|Q83SW5|YGIQ_SALTI UPF0313 protein ygiQ OS=Salmonella typhi GN... 29 10.0

>sp|Q9DGB9|VMV1_CROAT Zinc metalloproteinase-disintegrin VAP1
OS=Crotalus atrox PE=1 SV=1
Length = 610

Score = 30.4 bits (67), Expect = 3.4
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -2

Query: 358 NGPTAGAVMAGGMKPAANGLYSACLISVDKKRKAHRTCLLI*MLPQYQTAGDHSRCTVTC 179
NGPTAG GG+ N +YSA ++ D + H + + + DH + T TC
Sbjct: 297 NGPTAGLGYLGGI---CNTMYSAGIVQ-DHSKIHHLVAIAMAHEMGHNLGMDHDKDTCTC 352

Query: 178 SHR 170
R
Sbjct: 353 GTR 355


>sp|Q8AWI5|VMHA_AGKHP Zinc metalloprotease-disintegrin halysase
OS=Agkistrodon halys pallas PE=1 SV=1
Length = 610

Score = 30.4 bits (67), Expect = 3.4
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = -2

Query: 358 NGPTAGAVMAGGMKPAANGLYSACLISVDKKRKAHRTCLLI*MLPQYQTAGDHSRCTVTC 179
NGPTAG GG+ N +YSA ++ D + H + + + DH + T TC
Sbjct: 297 NGPTAGLGYLGGI---CNPMYSAGIVQ-DHNKIHHLVAIAMAHEMGHNLGIDHDKDTCTC 352

Query: 178 SHRS 167
+S
Sbjct: 353 GAKS 356


>sp|Q1PS45|VMAG_AGKAC Zinc metalloprotease-disintegrin agkihagin
OS=Agkistrodon acutus PE=2 SV=1
Length = 608

Score = 29.6 bits (65), Expect = 5.9
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = -2

Query: 358 NGPTAGAVMAGGMKPAANGLYSACLISVDKKRKAHRTCLLI*MLPQYQTAGDHSRCTVTC 179
NGPTAG GG+ + +YS ++ D + H + + + DH + T TC
Sbjct: 297 NGPTAGLAYLGGI---CDPMYSTAIVQ-DHNKIHHLVAIAMAHEMGHNLGIDHDKDTCTC 352

Query: 178 SHRS 167
+ +S
Sbjct: 353 AAKS 356


>sp|Q8ZM03|YGIQ_SALTY UPF0313 protein ygiQ OS=Salmonella typhimurium
GN=ygiQ PE=3 SV=1
Length = 723

Score = 28.9 bits (63), Expect = 10.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1

Query: 277 PKSSRQSRVRSLLASFHRP*QHQPLARWPLIRR 375
PK RQ R+ L +H P A WPLIR+
Sbjct: 631 PKGDRQRRLHKALLRYHDP------ANWPLIRQ 657


>sp|Q83SW5|YGIQ_SALTI UPF0313 protein ygiQ OS=Salmonella typhi
GN=ygiQ PE=3 SV=1
Length = 723

Score = 28.9 bits (63), Expect = 10.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1

Query: 277 PKSSRQSRVRSLLASFHRP*QHQPLARWPLIRR 375
PK RQ R+ L +H P A WPLIR+
Sbjct: 631 PKGDRQRRLHKALLRYHDP------ANWPLIRQ 657


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916046|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_D07.
(443 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******