BP916048 |
Clone id |
YMU001_000082_D09 |
Library |
YMU01 |
Length |
563 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000082_D09. |
Accession |
BP916048 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4132Contig1 |
Sequence |
CATATGATAATGACAAACGTGGTCGACAGCTCTACAACATTAGACAATGTGACCTGCTAT AGATCGATGGACCTAGGCTCGTGATATTTTGATCCTTGGCATGGACTTCTTCATCTGCCG CAAACGCTCCTTCTCTTCTCGCTTGCGTATAGCTTCTACAGAAAGCTTAGAATCAACACT TTCGAATGCTTTACGCCTCTCTTGTTTCCTTTTCTGTGAAGCTTCCTGGCGAGCAGTCTG GGCTTCTTTAAAAGCCTCCTGAGCCACTTTAGCCCTTGCAGCGTCAGCTTTTGCACGCAG CTGCGTACTGAGCTTATAGCGGCCCAGAAGATCAATATAATATGGTACAAGGGCAATCAA CCTTGACATATCCCCCATACTATTGATCGAGGGAAGTGTAAATTTGAACTGAAGTATCCT TTTATGCGCTCCTGTCGGAAACTCATCAGTGAAATGCATAGAGACAAAGTGCTTTCCAAA CCTCTCAAAAGCTTTCTCCCCAAAAACCTGATCTAAAGCAGTCTCTGTGACAACATCATA GGCCAGATCTCGGAACTCGGCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q94CC0 |
Definition |
sp|Q94CC0|Y5994_ARATH Uncharacterized protein At5g49945 OS=Arabidopsis thaliana |
Align length |
162 |
Score (bit) |
167.0 |
E-value |
3.0e-41 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916048|Adiantum capillus-veneris mRNA, clone: YMU001_000082_D09. (563 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q94CC0|Y5994_ARATH Uncharacterized protein At5g49945 OS=Arabi... 167 3e-41 sp|Q6AZI2|CCD47_XENLA Coiled-coil domain-containing protein 47 O... 40 0.010 sp|Q66I12|CCD47_DANRE Coiled-coil domain-containing protein 47 O... 39 0.018 sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain... 39 0.023 sp|Q9D024|CC47_MOUSE Coiled-coil domain-containing protein 47 OS... 37 0.067 sp|Q5U2X6|CCD47_RAT Coiled-coil domain-containing protein 47 OS=... 37 0.088 sp|Q96A33|CCD47_HUMAN Coiled-coil domain-containing protein 47 O... 37 0.088 sp|Q3ZC50|CCD47_BOVIN Coiled-coil domain-containing protein 47 O... 37 0.088 sp|P0C204|CCD47_MACFA Coiled-coil domain-containing protein 47 O... 36 0.15 sp|A5DLJ8|NST1_PICGU Stress response protein NST1 OS=Pichia guil... 35 0.20 sp|Q54Y06|Y8487_DICDI Probable cyclin-dependent serine/threonine... 34 0.43 sp|Q7TNY6|GCP60_RAT Golgi resident protein GCP60 OS=Rattus norve... 34 0.43 sp|Q9H3P7|GCP60_HUMAN Golgi resident protein GCP60 OS=Homo sapie... 34 0.43 sp|Q13111|CAF1A_HUMAN Chromatin assembly factor 1 subunit A OS=H... 34 0.43 sp|Q5B3C8|NST1_EMENI Stress response protein nst1 OS=Emericella ... 34 0.57 sp|Q5ZIA2|MAP7_CHICK Ensconsin OS=Gallus gallus GN=MAP7 PE=2 SV=1 34 0.57 sp|Q92376|KLP1_SCHPO Kinesin-like protein 1 OS=Schizosaccharomyc... 34 0.57 sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain... 34 0.57 sp|Q6CBW0|NST1_YARLI Stress response protein NST1 OS=Yarrowia li... 33 0.74 sp|Q6BUT3|NST1_DEBHA Stress response protein NST1 OS=Debaryomyce... 33 0.74 sp|Q07283|TRHY_HUMAN Trichohyalin OS=Homo sapiens GN=TCHH PE=1 SV=2 33 0.97 sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain... 33 0.97 sp|Q02040|SF17A_HUMAN Splicing factor, arginine/serine-rich 17A ... 33 1.3 sp|Q6FM98|NST1_CANGA Stress response protein NST1 OS=Candida gla... 33 1.3 sp|Q8BMP6|GCP60_MOUSE Golgi resident protein GCP60 OS=Mus muscul... 33 1.3 sp|Q9QWF0|CAF1A_MOUSE Chromatin assembly factor 1 subunit A OS=M... 33 1.3 sp|P34623|YO87_CAEEL Uncharacterized protein ZK1236.7 OS=Caenorh... 32 1.7 sp|Q2GZN9|NST1_CHAGB Stress response protein NST1 OS=Chaetomium ... 32 1.7 sp|P13816|GARP_PLAFF Glutamic acid-rich protein OS=Plasmodium fa... 32 1.7 sp|O04096|FB3_ARATH F-box protein At1g10890 OS=Arabidopsis thali... 32 1.7
>sp|Q94CC0|Y5994_ARATH Uncharacterized protein At5g49945 OS=Arabidopsis thaliana GN=At5g49945 PE=1 SV=1 Length = 480
Score = 167 bits (423), Expect = 3e-41 Identities = 79/162 (48%), Positives = 119/162 (73%) Frame = -3
Query: 561 AEFRDLAYDVVTETALDQVFGEKAFERFGKHFVSMHFTDEFPTGAHKRILQFKFTLPSIN 382 +E +++A D++T+T LDQVFG+KA +++GK+F+SMH +D+ P G HK+++ FKF+LP Sbjct: 319 SESKEVAADLITDTVLDQVFGDKAVDKYGKNFMSMHISDQHP-GKHKKMMLFKFSLPDAK 377
Query: 381 SMGDMSRLIALVPYYIDLLGRYKLSTQLXXXXXXXXXXXXXXAFKEAQTARQEASQKRKQ 202 M D+ RL+AL+PYYIDL+GRY+LS+Q A+KE ARQEA QK+K Sbjct: 378 HMDDIVRLVALIPYYIDLVGRYRLSSQARNKTESGRQKAAEEAYKELHNARQEALQKKKA 437
Query: 201 ERRKAFESVDSKLSVEAIRKREEKERLRQMKKSMPRIKISRA 76 E++K E ++K+S E IRK+E KER RQ+KK++P++K+SR+ Sbjct: 438 EKKKMMEEAEAKMSAEVIRKKEAKERARQVKKAVPKMKMSRS 479
>sp|Q6AZI2|CCD47_XENLA Coiled-coil domain-containing protein 47 OS=Xenopus laevis GN=ccdc47 PE=2 SV=1 Length = 489
Score = 39.7 bits (91), Expect = 0.010 Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 27/152 (17%) Frame = -3
Query: 462 SMHFTDEFP-------------TGAHKRILQFKFTLP-----SINSMGDMSRLIALVPYY 337 S+HF+D+F K+ L F F +P S+ M + L+ +V Y Sbjct: 336 SIHFSDQFSGPKIMQEEGQPLKLPETKKTLLFTFNVPGSGNASVKDMEALLPLMNMVIYS 395
Query: 336 IDLLGRYKLSTQLXXXXXXXXXXXXXXAFKEAQTARQEASQKRKQERRKAFES------- 178 ID + +++L+ + K RQEA+Q R++E+++A + Sbjct: 396 IDKVKKFRLNREGKQKADKNRARVEENFLKITHVQRQEAAQTRREEKKRAEKERIMNEED 455
Query: 177 -VDSKLSVEAIRKREEKE-RLRQMKKSMPRIK 88 + EA ++RE+K+ +QMK ++K Sbjct: 456 PEKQRRLEEAAQRREQKKIEKKQMKMKQIKVK 487
>sp|Q66I12|CCD47_DANRE Coiled-coil domain-containing protein 47 OS=Danio rerio GN=ccdc47 PE=2 SV=1 Length = 486
Score = 38.9 bits (89), Expect = 0.018 Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 27/152 (17%) Frame = -3
Query: 462 SMHFTDEFP-------------TGAHKRILQFKFTLPSINSMG--DMSRLIAL---VPYY 337 S+HF+D+F K+ L F F +P + + DM L+ L V Y Sbjct: 333 SIHFSDQFSGPKVMQEEGQPLKLPETKKTLLFTFNVPGMGNTSPKDMDSLLPLMNMVIYS 392
Query: 336 IDLLGRYKLSTQLXXXXXXXXXXXXXXAFKEAQTARQEASQKRKQERRKAFES------- 178 ID + + +L+ + K+ RQEA+Q R++E+++A + Sbjct: 393 IDKVKKLRLNREGKQKADRNRARVEENFLKQTHAQRQEAAQTRREEKKRAEKERIMNEED 452
Query: 177 -VDSKLSVEAIRKREEKE-RLRQMKKSMPRIK 88 + EA ++RE+K+ +QMK ++K Sbjct: 453 PERQRRLEEAAQRREQKKMEKKQMKMKQIKVK 484
>sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens GN=BAZ2B PE=1 SV=2 Length = 1972
Score = 38.5 bits (88), Expect = 0.023 Identities = 21/57 (36%), Positives = 33/57 (57%) Frame = -3
Query: 249 KEAQTARQEASQKRKQERRKAFESVDSKLSVEAIRKREEKERLRQMKKSMPRIKISR 79 KE + RQ+A + QER + + + ++EA +K EEKERL+Q K+ R+ R Sbjct: 792 KEKEMRRQQAVLLKHQERERRRQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKER 848
>sp|Q9D024|CC47_MOUSE Coiled-coil domain-containing protein 47 OS=Mus musculus GN=Ccdc47 PE=2 SV=2 Length = 483
Score = 37.0 bits (84), Expect = 0.067 Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 26/152 (17%) Frame = -3
Query: 462 SMHFTDEFPTGA-------------HKRILQFKFTLPSINS-----MGDMSRLIALVPYY 337 S+HF+D+F KR L F F +P + M + L+ +V Y Sbjct: 330 SVHFSDQFSGPKIMQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMESLLPLMNMVIYS 389
Query: 336 IDLLGRYKLSTQLXXXXXXXXXXXXXXAFKEAQTARQEASQKRKQERRKAFES------- 178 ID +++L+ + K RQEA+Q R++E+++A + Sbjct: 390 IDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEED 449
Query: 177 -VDSKLSVEAIRKREEKERLRQMKKSMPRIKI 85 + EA +RE+K +L + + M +IK+ Sbjct: 450 PEKQRRLEEAALRREQK-KLEKKQMKMKQIKV 480
>sp|Q5U2X6|CCD47_RAT Coiled-coil domain-containing protein 47 OS=Rattus norvegicus GN=Ccdc47 PE=2 SV=1 Length = 483
Score = 36.6 bits (83), Expect = 0.088 Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%) Frame = -3
Query: 462 SMHFTDEFPTGA-------------HKRILQFKFTLPSINSM--GDMSRLIAL---VPYY 337 S+HF+D+F KR L F F +P + DM L+ L V Y Sbjct: 330 SVHFSDQFSGPKIMQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIYS 389
Query: 336 IDLLGRYKLSTQLXXXXXXXXXXXXXXAFKEAQTARQEASQKRKQERRKAFES------- 178 ID +++L+ + K RQEA+Q R++E+++A + Sbjct: 390 IDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEED 449
Query: 177 -VDSKLSVEAIRKREEKERLRQMKKSMPRIKI 85 + EA +RE+K +L + + M +IK+ Sbjct: 450 PEKQRRLEEAALRREQK-KLEKKQMKMKQIKV 480
>sp|Q96A33|CCD47_HUMAN Coiled-coil domain-containing protein 47 OS=Homo sapiens GN=CCDC47 PE=1 SV=1 Length = 483
Score = 36.6 bits (83), Expect = 0.088 Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%) Frame = -3
Query: 462 SMHFTDEFPTGA-------------HKRILQFKFTLPSINSM--GDMSRLIAL---VPYY 337 S+HF+D+F KR L F F +P + DM L+ L V Y Sbjct: 330 SVHFSDQFSGPKIMQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIYS 389
Query: 336 IDLLGRYKLSTQLXXXXXXXXXXXXXXAFKEAQTARQEASQKRKQERRKAFES------- 178 ID +++L+ + K RQEA+Q R++E+++A + Sbjct: 390 IDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEED 449
Query: 177 -VDSKLSVEAIRKREEKERLRQMKKSMPRIKI 85 + EA +RE+K +L + + M +IK+ Sbjct: 450 PEKQRRLEEAALRREQK-KLEKKQMKMKQIKV 480
>sp|Q3ZC50|CCD47_BOVIN Coiled-coil domain-containing protein 47 OS=Bos taurus GN=CCDC47 PE=2 SV=1 Length = 483
Score = 36.6 bits (83), Expect = 0.088 Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%) Frame = -3
Query: 462 SMHFTDEFPTGA-------------HKRILQFKFTLPSINSM--GDMSRLIAL---VPYY 337 S+HF+D+F KR L F F +P + DM L+ L V Y Sbjct: 330 SIHFSDQFSGPKIMQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIYS 389
Query: 336 IDLLGRYKLSTQLXXXXXXXXXXXXXXAFKEAQTARQEASQKRKQERRKAFES------- 178 ID +++L+ + K RQEA+Q R++E+++A + Sbjct: 390 IDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEED 449
Query: 177 -VDSKLSVEAIRKREEKERLRQMKKSMPRIKI 85 + EA +RE+K +L + + M +IK+ Sbjct: 450 PEKQRRLEEAALRREQK-KLEKKQMKMKQIKV 480
>sp|P0C204|CCD47_MACFA Coiled-coil domain-containing protein 47 OS=Macaca fascicularis GN=CCDC47 PE=2 SV=1 Length = 483
Score = 35.8 bits (81), Expect = 0.15 Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 13/126 (10%) Frame = -3
Query: 423 KRILQFKFTLPSINSM--GDMSRLIAL---VPYYIDLLGRYKLSTQLXXXXXXXXXXXXX 259 KR L F F +P + DM L+ L V Y ID +++L+ + Sbjct: 356 KRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEE 415
Query: 258 XAFKEAQTARQEASQKRKQERRKAFES--------VDSKLSVEAIRKREEKERLRQMKKS 103 K RQEA+Q R++E+++A + + EA +RE+K +L + + Sbjct: 416 NFLKLTHVQRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEEAALRREQK-KLEKKQMK 474
Query: 102 MPRIKI 85 M +IK+ Sbjct: 475 MKQIKV 480
>sp|A5DLJ8|NST1_PICGU Stress response protein NST1 OS=Pichia guilliermondii GN=NST1 PE=3 SV=2 Length = 1107
Score = 35.4 bits (80), Expect = 0.20 Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Frame = -3
Query: 246 EAQTARQEASQKRKQERRKAFESVDSKLSVEAIRKREEKERL-RQMKKSMPR 94 E + ++EA QK+++E+RK E + K E +K+EEKER R++K+ R Sbjct: 659 EQKRRKEEARQKKEEEKRKRIEELRLKKEAEK-KKQEEKERKERELKEKKER 709
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPZ1 |
Definition |
tr|B8LPZ1|B8LPZ1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
161 |
Score (bit) |
197.0 |
E-value |
3.0e-49 |
Report |
|