BP916050
Clone id YMU001_000082_D12
Library
Length 453
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000082_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TCCTCTCTCCCCACGTTGTCCGTATTGCACACCATATCCTACATTTGTCGAGCTACTGCG
CCTCCATCAACTTCTTGAGCTTCGGTGCTCTATACTCTGTAGGTCTGGCCCTTCAAATCT
CTCCGTTTCGCTCCAAGACTTGGGCTGCAAATCCTCTATGTTCTCACCCTCAGCTATGCT
CGTGTAGAATTAGAAGAGTTGAAAAGGTTAGAAGGCCTCCCTTTTGATAGCCGAACAGTG
TGGGATGGTGGGCAGATTCCTGAGAGCTAGCGCCACCCATCATGATGAGTTACACCTCTT
CTCACCGTCCCTTTCTCCACTCCCTCGATGCTGAAAATGAGCTGGTAGCTATACTGTCCT
CAACCTATCAAAGGCCTGCAGGCTAGACATGAACTTCTCCAAATTTATCTCCTCCTCCTC
CTCCAATTGTACTCGCTATTCAAATCTTTTAGC
■■Homology search results ■■ -
sp_hit_id Q96N68
Definition sp|Q96N68|CR015_HUMAN Uncharacterized protein C18orf15 OS=Homo sapiens
Align length 72
Score (bit) 30.8
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916050|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_D12.
(453 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q96N68|CR015_HUMAN Uncharacterized protein C18orf15 OS=Homo s... 31 2.8
sp|Q9SKP6|TPIC_ARATH Triosephosphate isomerase, chloroplastic OS... 30 4.8

>sp|Q96N68|CR015_HUMAN Uncharacterized protein C18orf15 OS=Homo
sapiens GN=C18orf15 PE=2 SV=1
Length = 181

Score = 30.8 bits (68), Expect = 2.8
Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 17/72 (23%)
Frame = +3

Query: 21 RIAHHILHLSSY----------CASINFLSFGALYSVGLALQISPFRSKTWAANPLCS-H 167
R++H + H+ S S F G S L L++ TWA P C H
Sbjct: 61 RLSHRLPHICSQPPLGPFLPLTWPSCGFFGLGGAASASLGLEVLQDSVSTWARGPCCPVH 120

Query: 168 PQ------LCSC 185
PQ +C+C
Sbjct: 121 PQSLTVVCMCAC 132


>sp|Q9SKP6|TPIC_ARATH Triosephosphate isomerase, chloroplastic
OS=Arabidopsis thaliana GN=TIM PE=1 SV=1
Length = 315

Score = 30.0 bits (66), Expect = 4.8
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3

Query: 267 LAPPIMMSYTSSHRPFLHSLDAENELVAILSSTYQRPAG 383
++P + + SSH+ F H +++ LV+ SS+++ P G
Sbjct: 18 ISPKLDAAAVSSHQSFFHRVNSSTRLVSSSSSSHRSPRG 56


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916050|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_D12.
(453 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******