BP916064 |
Clone id |
YMU001_000082_F06 |
Library |
YMU01 |
Length |
379 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000082_F06. |
Accession |
BP916064 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGACGAGGGTAGAGAGTTACTTTCATAAATTGCAGATTAACCCAAGAATGCATCCTCACA TGCTCATAAAATCCTTCCTCATTATTTTCTGCTTTGTAATTTCTTATTACACGACCTTCT TTGGGAGTCAAAGATTTGGACTTTCAGTATTCTTTGCAATAGTTGCTGGTCTAATGGCTG CCGAGATTGGCATGTCCATTCAACATGATGCCAACCATGGTTCCTATACAAGATGGCGGA GGTTGGGTTACTTGATGAGTGTAACTATAGATTTGGTAGGAGTTAGCAGCTTTATGTGGA GGCAACAACATGTAGTTGGCCATCATTCTTTTACAAATGTCAATGGCTATGATCCAGACA TAAGGGTGCTTAAACCCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O74212 |
Definition |
sp|O74212|FAD5_MORAP Delta(5) fatty acid desaturase OS=Mortierella alpina |
Align length |
129 |
Score (bit) |
88.2 |
E-value |
1.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916064|Adiantum capillus-veneris mRNA, clone: YMU001_000082_F06. (379 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O74212|FAD5_MORAP Delta(5) fatty acid desaturase OS=Mortierel... 88 1e-17 sp|Q08871|LLCD_SYNY3 Linoleoyl-CoA desaturase OS=Synechocystis s... 80 4e-15 sp|O96099|FAD5B_DICDI Delta(5) fatty acid desaturase B OS=Dictyo... 79 9e-15 sp|Q9Y1W0|FAD5A_DICDI Delta(5) fatty acid desaturase A OS=Dictyo... 74 3e-13 sp|Q1ZXQ5|FAD5C_DICDI Probable Delta(5) fatty acid desaturase C ... 70 2e-12 sp|Q5REA7|FADS2_PONAB Fatty acid desaturase 2 OS=Pongo abelii GN... 39 0.008 sp|Q4R749|FADS2_MACFA Fatty acid desaturase 2 OS=Macaca fascicul... 39 0.010 sp|O95864|FADS2_HUMAN Fatty acid desaturase 2 OS=Homo sapiens GN... 39 0.010 sp|A4FV48|FADS2_BOVIN Fatty acid desaturase 2 OS=Bos taurus GN=F... 35 0.088 sp|Q9Z122|FADS2_RAT Fatty acid desaturase 2 OS=Rattus norvegicus... 34 0.20 sp|Q8TJA9|HPPA1_METAC Pyrophosphate-energized proton pump 1 OS=M... 34 0.26 sp|Q50783|MVHA_METTH F420-non-reducing hydrogenase subunit A OS=... 33 0.57 sp|Q9D871|CEA18_MOUSE Carcinoembryonic antigen-related cell adhe... 33 0.57 sp|Q9DEX7|FADS2_DANRE Fatty acid desaturase 2 OS=Danio rerio GN=... 32 0.75 sp|A4UVI1|FADS1_PAPAN Fatty acid desaturase 1 OS=Papio anubis GN... 32 0.75 sp|A8Y9G2|RPOC2_LOLPR DNA-directed RNA polymerase subunit beta''... 32 1.3 sp|Q9Z0R9|FADS2_MOUSE Fatty acid desaturase 2 OS=Mus musculus GN... 32 1.3 sp|Q6DDK2|FADS2_XENLA Fatty acid desaturase 2 OS=Xenopus laevis ... 31 2.2 sp|A5GQH5|NU4C_SYNR3 NAD(P)H-quinone oxidoreductase chain 4 OS=S... 30 2.8 sp|P34446|PAT2_CAEEL Integrin alpha pat-2 OS=Caenorhabditis eleg... 30 4.8 sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9... 29 6.3 sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9... 29 6.3 sp|Q21454|RM35_CAEEL Probable 39S ribosomal protein L35, mitocho... 29 6.3 sp|Q9BMN8|LAR_CAEEL Tyrosine-protein phosphatase Lar-like OS=Cae... 29 6.3 sp|Q8Y564|DCUP_LISMO Uroporphyrinogen decarboxylase OS=Listeria ... 29 6.3 sp|Q71XF3|DCUP_LISMF Uroporphyrinogen decarboxylase OS=Listeria ... 29 6.3 sp|Q929G1|DCUP_LISIN Uroporphyrinogen decarboxylase OS=Listeria ... 29 6.3 sp|Q8PYZ8|HPPA1_METMA Pyrophosphate-energized proton pump 1 OS=M... 29 8.3 sp|Q73R54|CNPD_TREDE 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 29 8.3 sp|Q6MNQ3|CNPD1_BDEBA 2',3'-cyclic-nucleotide 2'-phosphodiestera... 29 8.3
>sp|O74212|FAD5_MORAP Delta(5) fatty acid desaturase OS=Mortierella alpina GN=DES1 PE=2 SV=1 Length = 446
Score = 88.2 bits (217), Expect = 1e-17 Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 4/129 (3%) Frame = +3
Query: 3 TRVESYFHKLQINPRMHPHMLIKSFLIIFCFVISYYTTFFGS---QRFGLSVFFAIVAGL 173 TRVE YF I+P+ P + + LI + SYY F +R L V FAI+ G Sbjct: 101 TRVEGYFTDRDIDPKNRPEIWGRYALIFGSLIASYYAQLFVPFVVERTWLQVVFAIIMGF 160
Query: 174 MAAEIGMSIQHDANHGSYTRWRRLGYLMSVTIDLV-GVSSFMWRQQHVVGHHSFTNVNGY 350 A++G++ HDA+H S T + ++ T D G S +W QH++GHH +TN+ G Sbjct: 161 ACAQVGLNPLHDASHFSVTHNPTVWKILGATHDFFNGASYLVWMYQHMLGHHPYTNIAGA 220
Query: 351 DPDIRVLKP 377 DPD+ +P Sbjct: 221 DPDVSTFEP 229
>sp|Q08871|LLCD_SYNY3 Linoleoyl-CoA desaturase OS=Synechocystis sp. (strain PCC 6803) GN=des6 PE=4 SV=1 Length = 359
Score = 79.7 bits (195), Expect = 4e-15 Identities = 36/119 (30%), Positives = 67/119 (56%) Frame = +3
Query: 6 RVESYFHKLQINPRMHPHMLIKSFLIIFCFVISYYTTFFGSQRFGLSVFFAIVAGLMAAE 185 RV++YF + + R +P M +K+ +I+ ++ F F + + +V + A Sbjct: 22 RVDAYFAEHGLTQRDNPSMYLKTLIIVLWLFSAWAFVLFAPVIFPVRLLGCMVLAIALAA 81
Query: 186 IGMSIQHDANHGSYTRWRRLGYLMSVTIDLVGVSSFMWRQQHVVGHHSFTNVNGYDPDI 362 ++ HDANH +Y+ + ++ +T D VG+SSF+WR +H HH++TN+ G+D +I Sbjct: 82 FSFNVGHDANHNAYSSNPHINRVLGMTYDFVGLSSFLWRYRHNYLHHTYTNILGHDVEI 140
>sp|O96099|FAD5B_DICDI Delta(5) fatty acid desaturase B OS=Dictyostelium discoideum GN=fadB PE=1 SV=1 Length = 467
Score = 78.6 bits (192), Expect = 9e-15 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 1/120 (0%) Frame = +3
Query: 6 RVESYFHKLQINPRMHPHMLIKSFLIIFCFVISYYTTFFGSQRFGLSVFFAIVAGLMAAE 185 RV +F +P++ + + LI ++YY + F + RF L+ FA++ G+ + Sbjct: 109 RVRKHFQTSSQDPKVSVGVFTRMVLIYLFLFVTYYLSQFSTDRFWLNCIFAVLYGVANSL 168
Query: 186 IGMSIQHDANHGSYTRWRRLGYLMSVTIDL-VGVSSFMWRQQHVVGHHSFTNVNGYDPDI 362 G+ HDA H + T ++ T DL G S + W QHV+GHH +TNV DPD+ Sbjct: 169 FGLHTMHDACHTAITHNPMTWKILGATFDLFAGASFYAWCHQHVIGHHLYTNVRNADPDL 228
>sp|Q9Y1W0|FAD5A_DICDI Delta(5) fatty acid desaturase A OS=Dictyostelium discoideum GN=fadA PE=1 SV=1 Length = 464
Score = 73.6 bits (179), Expect = 3e-13 Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 1/120 (0%) Frame = +3
Query: 6 RVESYFHKLQINPRMHPHMLIKSFLIIFCFVISYYTTFFGSQRFGLSVFFAIVAGLMAAE 185 RV +F +P+M + + L+ ++YY + S F L+ F AIV L + Sbjct: 110 RVRKHFKATDQDPQMAVSIFSRLALVYLLVFVTYYLAHYTSNNFYLNCFLAIVYALCNSL 169
Query: 186 IGMSIQHDANHGSYTRWRRLGYLMSVTIDLVGVSSFM-WRQQHVVGHHSFTNVNGYDPDI 362 M + HD+ H + + + + M + D V +SF+ W QHV+GHH +TNV DPD+ Sbjct: 170 FSMHMMHDSCHAAISHYPGVWKWMGASFDFVTGASFLSWCHQHVIGHHIYTNVRNADPDL 229
>sp|Q1ZXQ5|FAD5C_DICDI Probable Delta(5) fatty acid desaturase C OS=Dictyostelium discoideum GN=DDB_G0294553 PE=3 SV=1 Length = 459
Score = 70.5 bits (171), Expect = 2e-12 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 2/121 (1%) Frame = +3
Query: 6 RVESYFHKLQINPRMHPHMLIKSFLIIFCFVISYYTTFFGS-QRFGLSVFFAIVAGLMAA 182 RV +F K +P+ ++ + + + + SYY + + + F L+ AIV L + Sbjct: 107 RVREHFKKSNKDPKFAFGIIARLIFVYWFLITSYYVSHYAFIENFYLNCLLAIVYSLSNS 166
Query: 183 EIGMSIQHDANHGSYTRWRRLGYLMSVTIDL-VGVSSFMWRQQHVVGHHSFTNVNGYDPD 359 + + HDA H + + ++ + T DL +G S F W QHV+GHH +TN+ DPD Sbjct: 167 LFSLHMMHDACHSAISHNPKVWKWLGATYDLFIGASFFYWCNQHVIGHHVYTNIRNADPD 226
Query: 360 I 362 I Sbjct: 227 I 227
>sp|Q5REA7|FADS2_PONAB Fatty acid desaturase 2 OS=Pongo abelii GN=FADS2 PE=2 SV=1 Length = 444
Score = 38.9 bits (89), Expect = 0.008 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%) Frame = +3
Query: 51 HPHMLIKSFLIIFCFVISYYTTFFGSQRFGLSVFFAIVAGLMAAEIGMSIQHDANHGSYT 230 H L+ II I+++T F+ + ++ A V A+ G +QHD H S Sbjct: 130 HVFFLLLLAHIIALESIAWFTVFYFGNGWISTLITAFVLATSQAQAGW-LQHDYGHLSVY 188
Query: 231 RWRRLGYLMSVTI--DLVGVSSFMWRQQHVVGHHSFTNVNGYDPDIRVL 371 R + +L+ + L G S+ W +H HH+ N+ DPD+ +L Sbjct: 189 RKPKWNHLVHKFVIGHLKGASANWWNHRHFQ-HHAKPNIFHKDPDVNML 236
>sp|Q4R749|FADS2_MACFA Fatty acid desaturase 2 OS=Macaca fascicularis GN=FADS2 PE=2 SV=1 Length = 444
Score = 38.5 bits (88), Expect = 0.010 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%) Frame = +3
Query: 51 HPHMLIKSFLIIFCFVISYYTTFFGSQRFGLSVFFAIVAGLMAAEIGMSIQHDANHGSYT 230 H L+ II I+++T F+ + ++ A V A+ G +QHD H S Sbjct: 130 HVFFLLLLAHIIALESIAWFTVFYFGNGWIPTLITAFVLATSQAQAGW-LQHDYGHLSVY 188
Query: 231 RWRRLGYLMSVTI--DLVGVSSFMWRQQHVVGHHSFTNVNGYDPDIRVL 371 R + +L+ + L G S+ W +H HH+ N+ DPD+ +L Sbjct: 189 RKPKWNHLVHKFVIGHLKGASANWWNHRHFQ-HHAKPNIFHKDPDVNML 236
>sp|O95864|FADS2_HUMAN Fatty acid desaturase 2 OS=Homo sapiens GN=FADS2 PE=1 SV=1 Length = 444
Score = 38.5 bits (88), Expect = 0.010 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%) Frame = +3
Query: 51 HPHMLIKSFLIIFCFVISYYTTFFGSQRFGLSVFFAIVAGLMAAEIGMSIQHDANHGSYT 230 H L+ II I+++T F+ + ++ A V A+ G +QHD H S Sbjct: 130 HVFFLLLLAHIIALESIAWFTVFYFGNGWIPTLITAFVLATSQAQAGW-LQHDYGHLSVY 188
Query: 231 RWRRLGYLMSVTI--DLVGVSSFMWRQQHVVGHHSFTNVNGYDPDIRVL 371 R + +L+ + L G S+ W +H HH+ N+ DPD+ +L Sbjct: 189 RKPKWNHLVHKFVIGHLKGASANWWNHRHFQ-HHAKPNIFHKDPDVNML 236
>sp|A4FV48|FADS2_BOVIN Fatty acid desaturase 2 OS=Bos taurus GN=FADS2 PE=2 SV=1 Length = 444
Score = 35.4 bits (80), Expect = 0.088 Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%) Frame = +3
Query: 99 ISYYTTFFGSQRFGLSVFFAIVAGLMAAEIGMSIQHDANHGSYTRWRRLGYLMSVTI--D 272 I+++T F+ + ++ A V A+ G +QHD H S + +++ + Sbjct: 146 IAWFTLFYFGNGWIPTIITAFVLATSQAQAGW-LQHDYGHLSVYKKSMWNHIVHKFVIGH 204
Query: 273 LVGVSSFMWRQQHVVGHHSFTNVNGYDPDIRVL 371 L G S+ W +H HH+ N+ DPD+ +L Sbjct: 205 LKGASANWWNHRHFQ-HHAKPNIFHKDPDVNML 236
>sp|Q9Z122|FADS2_RAT Fatty acid desaturase 2 OS=Rattus norvegicus GN=Fads2 PE=2 SV=1 Length = 444
Score = 34.3 bits (77), Expect = 0.20 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 3/106 (2%) Frame = +3
Query: 63 LIKSFLIIFCFVISYYTTFFGSQRFGLSVFFAIVAGLMAAEIGMSIQHDANHGSYTR--- 233 L+ S +I+ + + ++FG+ +V A V A+ G +QHD H S + Sbjct: 135 LLLSHIIVMESIAWFILSYFGNGWIP-TVITAFVLATSQAQAGW-LQHDYGHLSVYKKSI 192
Query: 234 WRRLGYLMSVTIDLVGVSSFMWRQQHVVGHHSFTNVNGYDPDIRVL 371 W + + + L G S+ W +H HH+ N+ DPDI+ L Sbjct: 193 WNHIVHKFVIG-HLKGASANWWNHRHFQ-HHAKPNIFHKDPDIKSL 236
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SIZ6 |
Definition |
tr|A9SIZ6|A9SIZ6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
124 |
Score (bit) |
172.0 |
E-value |
6.0e-42 |
Report |
|