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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916066
Clone id YMU001_000082_F08
Library
Length 484
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000082_F08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCAGGTTGTAGTTGATCCTTCATCTTTAATGCCTCGTAGATAACCCTTGTTATGATCTCA
CCTCCTCCAATGTACAGTGGTGAGGTATTCCTGAGCTTGATAAGAGAAACCAATACATGT
GCAGCATGGTTTATCACTACCAACCCTGGACTCTGCAATGCCCATGTTAAGGTGGTGGCC
ATAGATGCCATGGGGTTGGTATACCTTGGTGGTCTCTTGCTTATGCACAAAACACACTGA
TTATATATTCTGCAAAGAATTTTTGCTGTTTGGTTCTGCATATCTTCAAATACTTGTGTC
GTTTGCTTGTTGCTTGAATACCACCAGCTTATGGTGTCTCTCTCTGACACTGGATCCCTC
CCTAGACAAATGGCAGGCGGCATGGATGATGTCGGTTGTGATTTTAATTTGTACTTTATT
GCCATATCGTCCTGTGACCATGCATGTTCCATCATCTTGGATTGATTCTACTAACTCATG
GACT
■■Homology search results ■■ -
sp_hit_id Q8YTZ6
Definition sp|Q8YTZ6|PHK2_ANASP Probable phosphoketolase 2 OS=Anabaena sp. (strain PCC 7120)
Align length 66
Score (bit) 34.7
E-value 0.23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916066|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_F08.
         (484 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8YTZ6|PHK2_ANASP Probable phosphoketolase 2 OS=Anabaena sp. ...    35   0.23 
sp|Q7NLX2|PHK_GLOVI Probable phosphoketolase OS=Gloeobacter viol...    34   0.30 
sp|Q988V7|PHK_RHILO Probable phosphoketolase OS=Rhizobium loti G...    33   0.68 
sp|Q8KCA0|PHK_CHLTE Probable phosphoketolase OS=Chlorobium tepid...    32   2.0  
sp|Q92T74|PHK1_RHIME Probable phosphoketolase 1 OS=Rhizobium mel...    32   2.0  
sp|Q6MFC0|PHK_PARUW Probable phosphoketolase OS=Protochlamydia a...    31   2.6  
sp|Q6N976|PHK_RHOPA Probable phosphoketolase OS=Rhodopseudomonas...    31   3.4  
sp|Q01172|PLYA_ASPNG Pectin lyase A OS=Aspergillus niger GN=pelA...    31   3.4  
sp|P55284|CADH5_MOUSE Cadherin-5 OS=Mus musculus GN=Cdh5 PE=2 SV=2     30   4.4  
sp|Q00374|PLYA_COLGL Pectin lyase OS=Colletotrichum gloeosporioi...    30   4.4  
sp|P31833|COX1_BRAJA Cytochrome c oxidase subunit 1 OS=Bradyrhiz...    30   5.7  
sp|Q82T07|PHK_NITEU Probable phosphoketolase OS=Nitrosomonas eur...    30   7.5  
sp|A7TZF0|SKIT3_MOUSE Selection and upkeep of intraepithelial T-...    29   9.8  
sp|Q6AYH0|IIP45_RAT Invasion-inhibitory protein 45 OS=Rattus nor...    29   9.8  
sp|Q5AXH3|TOF1_EMENI Topoisomerase 1-associated factor 1 OS=Emer...    29   9.8  
sp|Q00205|PLYB_ASPNG Pectin lyase B OS=Aspergillus niger GN=pelB...    29   9.8  
sp|P61907|DUT_CORDI Deoxyuridine 5'-triphosphate nucleotidohydro...    29   9.8  

>sp|Q8YTZ6|PHK2_ANASP Probable phosphoketolase 2 OS=Anabaena sp.
           (strain PCC 7120) GN=all2567 PE=3 SV=1
          Length = 793

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = -2

Query: 198 QPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLT-TVHWRR*DHNKGYLRGIKD 22
           QP   + H LN    E+   +DKP    I F++    +L   + +R+ +HN  ++RG K+
Sbjct: 667 QPKTEHPHGLNPKDFETIFTTDKP----IIFAFHGYPWLIHRLTYRQPNHNNLHVRGYKE 722

Query: 21  EGSTTT 4
           EG+TTT
Sbjct: 723 EGTTTT 728


>sp|Q7NLX2|PHK_GLOVI Probable phosphoketolase OS=Gloeobacter
           violaceus GN=glr0997 PE=3 SV=1
          Length = 793

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = -2

Query: 198 QPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLT-TVHWRR*DHNKGYLRGIKD 22
           QP   + H L+    +S    DKP    + F++    +L   + +RR +HN  ++RG K+
Sbjct: 667 QPESEHPHGLSDKDFDSIFTPDKP----VVFAFHGYPWLIHRLTYRRNNHNNIHVRGYKE 722

Query: 21  EGSTTT 4
           EG+TTT
Sbjct: 723 EGTTTT 728


>sp|Q988V7|PHK_RHILO Probable phosphoketolase OS=Rhizobium loti
           GN=mlr6575 PE=3 SV=1
          Length = 807

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = -2

Query: 207 KVYQPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLTTVH---WRR*DHNKGYL 37
           K Y PHG+          ++    DKP    + F+Y    Y  T+H   +RR +H+  ++
Sbjct: 673 KEYHPHGLSDREF-----DALFTPDKP----VIFAYHG--YPWTIHRLTYRRTNHDNIHV 721

Query: 36  RGIKDEGSTTT 4
           RG  +EG+TTT
Sbjct: 722 RGYNEEGTTTT 732


>sp|Q8KCA0|PHK_CHLTE Probable phosphoketolase OS=Chlorobium tepidum
           GN=CT1524 PE=3 SV=2
          Length = 791

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = -2

Query: 198 QPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLT-TVHWRR*DHNKGYLRGIKD 22
           QP   + H L     +    +DKP    I F+Y    +L   + +RR +H+  ++RG K+
Sbjct: 665 QPKEEHPHGLADRDFDDMFTTDKP----IIFAYHGYPWLIHRLTYRRTNHHNLHVRGYKE 720

Query: 21  EGSTTT 4
           EG+TTT
Sbjct: 721 EGTTTT 726


>sp|Q92T74|PHK1_RHIME Probable phosphoketolase 1 OS=Rhizobium
           meliloti GN=R00106 PE=3 SV=1
          Length = 789

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = -2

Query: 198 QPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLT-TVHWRR*DHNKGYLRGIKD 22
           QP G + H L     ++    DKP    I F++    +L   + +RR +H   ++RG K+
Sbjct: 647 QPSGEHPHGLPDRDFDALFTKDKP----IIFAFHGYPWLIHRLTYRRTNHANLHVRGYKE 702

Query: 21  EGSTTT 4
           EG+TTT
Sbjct: 703 EGTTTT 708


>sp|Q6MFC0|PHK_PARUW Probable phosphoketolase OS=Protochlamydia
           amoebophila (strain UWE25) GN=pc0005 PE=3 SV=1
          Length = 798

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = -2

Query: 198 QPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLT-TVHWRR*DHNKGYLRGIKD 22
           QP   + H L+    +    ++KP    I F+Y    +L   + +RR +H+  ++RG K+
Sbjct: 669 QPKEEHPHGLSNTDFDEMFTTNKP----IIFAYHGYPWLIHRLTYRRSNHSNIHVRGYKE 724

Query: 21  EGSTTT 4
           EG+TTT
Sbjct: 725 EGTTTT 730


>sp|Q6N976|PHK_RHOPA Probable phosphoketolase OS=Rhodopseudomonas
           palustris GN=RPA1673 PE=3 SV=1
          Length = 783

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = -2

Query: 204 VYQPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLT-TVHWRR*DHNKGYLRGI 28
           V QP   + H L+    +    +DKP    + F++    +L   + +RR +H   ++RG 
Sbjct: 655 VLQPSSEHPHGLDDRRFDELFTTDKP----VIFAFHGYPWLIHRLTYRRRNHVNIHVRGY 710

Query: 27  KDEGSTTT 4
           K+EG+TTT
Sbjct: 711 KEEGTTTT 718


>sp|Q01172|PLYA_ASPNG Pectin lyase A OS=Aspergillus niger GN=pelA
           PE=1 SV=1
          Length = 379

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 18/80 (22%), Positives = 40/80 (50%)
 Frame = -3

Query: 287 EDMQNQTAKILCRIYNQCVLCISKRPPRYTNPMASMATTLTWALQSPGLVVINHAAHVLV 108
           E+ +     +    YN  VL I+      T+  + +    + A++  GL +++ A ++++
Sbjct: 103 ENYEPDAPSVSVEYYNAGVLGIT-----VTSNKSLIGEGSSGAIKGKGLRIVSGAENIII 157

Query: 107 SLIKLRNTSPLYIGGGEIIT 48
             I + + +P Y+ GG+ IT
Sbjct: 158 QNIAVTDINPKYVWGGDAIT 177


>sp|P55284|CADH5_MOUSE Cadherin-5 OS=Mus musculus GN=Cdh5 PE=2 SV=2
          Length = 784

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
 Frame = +2

Query: 194 GWYTLVVS-CLCTKHTDYIFCKEFLLFGSAYLQILVSFACCLNTTSLWCLSLTLDPSLDK 370
           G  TL V  C C +  ++ FC+E        +Q LV+   C+ T ++  L + L   + K
Sbjct: 567 GTSTLTVGVCKCNEQGEFTFCEEMAAQAGVSIQALVAIFLCILTITVITLLIILRRRIRK 626

Query: 371 WQAAWMMSVVILICTLLPY 427
              A   S + +   L+ Y
Sbjct: 627 QAHAHSKSALEIHEQLVTY 645


>sp|Q00374|PLYA_COLGL Pectin lyase OS=Colletotrichum gloeosporioides
           GN=PNLA PE=3 SV=1
          Length = 380

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -3

Query: 158 LQSPGLVVINHAAHVLVSLIKLRNTSPLYIGGGEIIT 48
           ++  GL + N A +V++  I + N +P Y+ GG+ I+
Sbjct: 142 IKGKGLRITNSAKNVIIQNIHITNLNPKYVWGGDAIS 178
tr_hit_id O62413
Definition tr|O62413|O62413_CAEEL Protein Y22F5A.2, partially confirmed by transcript evidence OS=Caenorhabditis elegans
Align length 40
Score (bit) 38.1
E-value 0.22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916066|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_F08.
         (484 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O62413|O62413_CAEEL Protein Y22F5A.2, partially confirmed by ...    38   0.22 
tr|Q3MFW6|Q3MFW6_ANAVT D-xylulose 5-phosphate/D-fructose 6-phosp...    35   2.4  
tr|Q75CV3|Q75CV3_ASHGO ACL187Wp OS=Ashbya gossypii GN=ACL187W PE...    35   2.4  
tr|Q0URG1|Q0URG1_PHANO Putative uncharacterized protein OS=Phaeo...    35   2.4  
tr|B8BQP7|B8BQP7_THAPS Predicted protein OS=Thalassiosira pseudo...    34   3.1  
tr|B4S9G8|B4S9G8_PROA2 Phosphoketolase OS=Prosthecochloris aestu...    34   4.1  
tr|Q2QXF4|Q2QXF4_ORYSJ Putative uncharacterized protein OS=Oryza...    34   4.1  
tr|B7PP52|B7PP52_IXOSC Triacylglycerol lipase, putative OS=Ixode...    33   5.4  
tr|A6SIR2|A6SIR2_BOTFB Putative uncharacterized protein OS=Botry...    33   5.4  
tr|A3ZX45|A3ZX45_9PLAN Putative phosphoketolase OS=Blastopirellu...    33   7.0  
tr|Q5KK67|Q5KK67_CRYNE Galactinol synthase, putative (Putative u...    33   7.0  
tr|Q6F1T9|Q6F1T9_MESFL Threonyl-tRNA synthetase OS=Mesoplasma fl...    33   9.2  
tr|B2VYQ2|B2VYQ2_PYRTR Transcription elongation factor spt6 OS=P...    33   9.2  
tr|A7EXK6|A7EXK6_SCLS1 Putative uncharacterized protein OS=Scler...    33   9.2  

>tr|O62413|O62413_CAEEL Protein Y22F5A.2, partially confirmed by
           transcript evidence OS=Caenorhabditis elegans GN=sri-18
           PE=2 SV=2
          Length = 346

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +1

Query: 253 QRIFAVWFCISSNTCVVCLLLEYHQLMVSLSDTGSLPRQM 372
           Q +F +W   ++NTC+   LL+ HQ++ ++     LPRQM
Sbjct: 95  QMVFTLWCIGNTNTCIFISLLKRHQVVAAIEQKNVLPRQM 134


>tr|Q3MFW6|Q3MFW6_ANAVT D-xylulose 5-phosphate/D-fructose
           6-phosphate phosphoketolase OS=Anabaena variabilis
           (strain ATCC 29413 / PCC 7937) GN=Ava_0496 PE=4 SV=1
          Length = 793

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = -2

Query: 198 QPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLT-TVHWRR*DHNKGYLRGIKD 22
           QP   + H LN    E+   +DKP    I F++    +L   + +R+ +HN  ++RG K+
Sbjct: 667 QPKTEHPHGLNPKDFETIFTTDKP----IIFAFHGYPWLIHRLTYRQPNHNNLHVRGYKE 722

Query: 21  EGSTTT 4
           EG+TTT
Sbjct: 723 EGTTTT 728


>tr|Q75CV3|Q75CV3_ASHGO ACL187Wp OS=Ashbya gossypii GN=ACL187W PE=4
           SV=1
          Length = 861

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
 Frame = -3

Query: 416 KYKLKSQPTSSMPPAICLGRDPVSE-RDTISWWYSSNKQTTQVFEDMQNQTAKILCRIYN 240
           K +L S    ++PP + L  DPV + ++T++W             D Q   + ++    N
Sbjct: 402 KVQLVSLVHQALPPILNLINDPVLQVKETVAWCIGRIADLVVGAIDPQRHLSDVI----N 457

Query: 239 QCVLCISKRPPRYTNPMASMATTLTWALQSPGLVVINHAAHVLVSLIKLRN 87
            C+L ++  P   TN   ++   +     +PG  + N+   ++ SL+K  N
Sbjct: 458 ACLLGLNDHPKVATNCAWTIINLVEQLADNPGSPIYNYYPVLVDSLMKTAN 508


>tr|Q0URG1|Q0URG1_PHANO Putative uncharacterized protein
           OS=Phaeosphaeria nodorum GN=SNOG_05653 PE=4 SV=2
          Length = 1412

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -3

Query: 461 SKMMEHAWSQDDMAIKYKLKSQPTSSMPPAICLGRDPVSERDTISWWYSSN 309
           S+  E  +++ D A  YKLK+ P  S+P A+C+        D I W Y  N
Sbjct: 667 SRARESYYNRLDQA-PYKLKAAPLGSVPNALCMSNGQGQRGDAIMWAYVEN 716


>tr|B8BQP7|B8BQP7_THAPS Predicted protein OS=Thalassiosira
           pseudonana CCMP1335 GN=THAPSDRAFT_1356 PE=4 SV=1
          Length = 854

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = -3

Query: 407 LKSQPTSSMPPAICLGRDPVSERDTISWWYSSNKQTTQVFEDMQNQ-TAKILCRIYNQCV 231
           + SQP SS P +  +   P + R T+    S+N   + V E  +++ +A +   I  Q V
Sbjct: 144 VSSQPISSQPSSSLVTSPPTANRITMK--SSNNPSASPVLEPSESKVSASVSPTINPQPV 201

Query: 230 LCISKRPPRYTNPMASMAT 174
               K PP  T+P++++ T
Sbjct: 202 ATTPKNPPPSTSPLSTITT 220


>tr|B4S9G8|B4S9G8_PROA2 Phosphoketolase OS=Prosthecochloris
           aestuarii (strain DSM 271 / SK 413) GN=Paes_1620 PE=4
           SV=1
          Length = 798

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = -2

Query: 273 PNSKNSLQNI*SVCFVHKQETTKVYQPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQA 94
           P+ K  + N+  +  +  QE      PHG+   H      +    +DKP    + F+Y  
Sbjct: 656 PDLKIRVVNVIDLMTLQPQEE----HPHGLPDRHF-----DDIFTTDKP----VIFAYHG 702

Query: 93  QEYLT-TVHWRR*DHNKGYLRGIKDEGSTTT 4
             +L   + +RR +H   ++RG K+EG+TTT
Sbjct: 703 YPWLIHRLTYRRTNHRNLHVRGYKEEGTTTT 733


>tr|Q2QXF4|Q2QXF4_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=LOC_Os12g06230 PE=4 SV=2
          Length = 2279

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
 Frame = +2

Query: 269 FGSAYLQILVSFACCLNTTSLWCLSLTLDPSLDKWQAAWM-MSV----VILICTLLPYRP 433
           F SA ++I + F   +++TS+W       PS+ +W+ AW+ +SV      ++   LP  P
Sbjct: 7   FPSARVKIAIGFVDMVHSTSVWWAGKNRSPSM-RWEHAWLGLSVRTGQPTVVRQCLPQFP 65

Query: 434 VTMH 445
           VT H
Sbjct: 66  VTEH 69


>tr|B7PP52|B7PP52_IXOSC Triacylglycerol lipase, putative OS=Ixodes
           scapularis GN=IscW_ISCW018728 PE=4 SV=1
          Length = 634

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = -3

Query: 359 RDPVSERDTISWWYSSNKQTTQVFEDMQNQTAKILCRIYNQCVLCISKRPPRY 201
           R P + R+ + W++++N Q  +VFE + +Q A  L   Y      + K PP Y
Sbjct: 510 RAPKTPRNELPWFHANNPQRLKVFEALVSQAADPLLSPYLAPDELLKKLPPAY 562


>tr|A6SIR2|A6SIR2_BOTFB Putative uncharacterized protein
           OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_12517
           PE=4 SV=1
          Length = 384

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 13/40 (32%), Positives = 26/40 (65%)
 Frame = -3

Query: 167 TWALQSPGLVVINHAAHVLVSLIKLRNTSPLYIGGGEIIT 48
           T  +Q  GL +++ A+++++  IK+   +P Y+ GG+ IT
Sbjct: 140 TGIIQGKGLRMVSGASNIIIQNIKIEEINPKYVWGGDAIT 179


>tr|A3ZX45|A3ZX45_9PLAN Putative phosphoketolase OS=Blastopirellula
           marina DSM 3645 GN=DSM3645_27618 PE=4 SV=1
          Length = 789

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
 Frame = -2

Query: 198 QPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLTTVH---WRR*DHNKGYLRGI 28
           QPH  + H L+    +     DKP    + F++ A  Y T +H   +RR +H   ++RG 
Sbjct: 661 QPHSEHPHGLSDVDFDELFTKDKP----VIFAFHA--YPTLIHQLTYRRTNHANIHVRGY 714

Query: 27  KDEGSTTT 4
           K+EG+ TT
Sbjct: 715 KEEGTITT 722