BP916075
Clone id YMU001_000082_G05
Library
Length 383
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000082_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCATTTCCTCTAGCTCCCGAGTAAAGACATTATATGAACTGGATTAAAAGGGTCAGTCAT
CCTAAAATTAGGATTCATTTCTTGTCGCAAATATTCACTTGTAGCATACCATATTTCAAT
GGATTGACGTAATTTTTCTACCGCGTGTACATTCCCATAATGATGGTGTTTTTCCAAAAT
CAAACTTTGTTGTTCAGCATCTTGAACTAGCCATCCCTTAGAAGGTATTGTTAAAAGATC
ATCAATTCCTAATGAAATGGATGTAGCAGTAGCTTGTTGGAACCCCAGAGTTTTTACTTG
ATCCAGGATATGTGATGTATATGCCATTCCGAAGTGATCTATTAATCTACTAATAAGTCG
TTTCATGGCAGTTCCGTTTATCG
■■Homology search results ■■ -
sp_hit_id P38550
Definition sp|P38550|RPOC2_TOBAC DNA-directed RNA polymerase subunit beta'' OS=Nicotiana tabacum
Align length 118
Score (bit) 236.0
E-value 3.0e-62
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916075|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_G05.
(368 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P38550|RPOC2_TOBAC DNA-directed RNA polymerase subunit beta''... 236 3e-62
sp|Q33C48|RPOC2_NICTO DNA-directed RNA polymerase subunit beta''... 236 3e-62
sp|Q3C1G9|RPOC2_NICSY DNA-directed RNA polymerase subunit beta''... 236 3e-62
sp|Q2VEI6|RPOC2_SOLTU DNA-directed RNA polymerase subunit beta''... 234 1e-61
sp|Q2MIJ7|RPOC2_SOLBU DNA-directed RNA polymerase subunit beta''... 234 1e-61
sp|A0A325|RPOC2_COFAR DNA-directed RNA polymerase subunit beta''... 234 1e-61
sp|Q8S8Y1|RPOC2_ATRBE DNA-directed RNA polymerase subunit beta''... 234 1e-61
sp|Q49L08|RPOC2_EUCGG DNA-directed RNA polymerase subunit beta''... 234 1e-61
sp|Q9THV5|RPOC2_SINAL DNA-directed RNA polymerase subunit beta''... 233 2e-61
sp|A4QLS3|RPOC2_NASOF DNA-directed RNA polymerase subunit beta''... 233 2e-61
sp|A4QL96|RPOC2_LEPVR DNA-directed RNA polymerase subunit beta''... 233 2e-61
sp|A4QL09|RPOC2_DRANE DNA-directed RNA polymerase subunit beta''... 233 2e-61
sp|Q4VZP3|RPOC2_CUCSA DNA-directed RNA polymerase subunit beta''... 233 2e-61
sp|A4QK08|RPOC2_ARAHI DNA-directed RNA polymerase subunit beta''... 233 2e-61
sp|A4QJI9|RPOC2_AETGR DNA-directed RNA polymerase subunit beta''... 233 2e-61
sp|A4QJA5|RPOC2_AETCO DNA-directed RNA polymerase subunit beta''... 233 2e-61
sp|Q0ZJ30|RPOC2_VITVI DNA-directed RNA polymerase subunit beta''... 233 3e-61
sp|P11704|RPOC2_SPIOL DNA-directed RNA polymerase subunit beta''... 232 4e-61
sp|Q589B8|RPOC2_SILLA DNA-directed RNA polymerase subunit beta''... 232 4e-61
sp|Q09FX1|RPOC2_NANDO DNA-directed RNA polymerase subunit beta''... 232 4e-61
sp|A9L986|RPOC2_LEMMI DNA-directed RNA polymerase subunit beta''... 232 5e-61
sp|A7Y3B4|RPOC2_IPOPU DNA-directed RNA polymerase subunit beta''... 231 6e-61
sp|Q2MIB0|RPOC2_SOLLC DNA-directed RNA polymerase subunit beta''... 231 8e-61
sp|Q09G56|RPOC2_PLAOC DNA-directed RNA polymerase subunit beta''... 231 1e-60
sp|A4QJS3|RPOC2_OLIPU DNA-directed RNA polymerase subunit beta''... 231 1e-60
sp|Q0G9M9|RPOC2_LIRTU DNA-directed RNA polymerase subunit beta''... 231 1e-60
sp|Q2L8Z5|RPOC2_GOSHI DNA-directed RNA polymerase subunit beta''... 231 1e-60
sp|A0ZZ25|RPOC2_GOSBA DNA-directed RNA polymerase subunit beta''... 231 1e-60
sp|A4QKS1|RPOC2_CRUWA DNA-directed RNA polymerase subunit beta''... 231 1e-60
sp|A4QKI2|RPOC2_CAPBU DNA-directed RNA polymerase subunit beta''... 231 1e-60

>sp|P38550|RPOC2_TOBAC DNA-directed RNA polymerase subunit beta''
OS=Nicotiana tabacum GN=rpoC2 PE=3 SV=1
Length = 1388

Score = 236 bits (601), Expect = 3e-62
Identities = 115/118 (97%), Positives = 116/118 (98%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 19 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 78

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMS G+
Sbjct: 79 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGA 136


>sp|Q33C48|RPOC2_NICTO DNA-directed RNA polymerase subunit beta''
OS=Nicotiana tomentosiformis GN=rpoC2 PE=3 SV=1
Length = 1392

Score = 236 bits (601), Expect = 3e-62
Identities = 115/118 (97%), Positives = 116/118 (98%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMS G+
Sbjct: 83 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGA 140


>sp|Q3C1G9|RPOC2_NICSY DNA-directed RNA polymerase subunit beta''
OS=Nicotiana sylvestris GN=rpoC2 PE=3 SV=1
Length = 1392

Score = 236 bits (601), Expect = 3e-62
Identities = 115/118 (97%), Positives = 116/118 (98%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMS G+
Sbjct: 83 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGA 140


>sp|Q2VEI6|RPOC2_SOLTU DNA-directed RNA polymerase subunit beta''
OS=Solanum tuberosum GN=rpoC2 PE=3 SV=1
Length = 1392

Score = 234 bits (597), Expect = 1e-61
Identities = 114/118 (96%), Positives = 116/118 (98%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
MKRLISRLI+HFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 MKRLISRLIEHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMS G+
Sbjct: 83 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGA 140


>sp|Q2MIJ7|RPOC2_SOLBU DNA-directed RNA polymerase subunit beta''
OS=Solanum bulbocastanum GN=rpoC2 PE=3 SV=1
Length = 1392

Score = 234 bits (597), Expect = 1e-61
Identities = 114/118 (96%), Positives = 116/118 (98%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
MKRLISRLI+HFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 MKRLISRLIEHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMS G+
Sbjct: 83 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGA 140


>sp|A0A325|RPOC2_COFAR DNA-directed RNA polymerase subunit beta''
OS=Coffea arabica GN=rpoC2 PE=3 SV=1
Length = 1391

Score = 234 bits (597), Expect = 1e-61
Identities = 114/118 (96%), Positives = 116/118 (98%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
MKRLISRLIDHFGMAYTSHILDQVKTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 MKRLISRLIDHFGMAYTSHILDQVKTLGFKQATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMS G+
Sbjct: 83 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGA 140


>sp|Q8S8Y1|RPOC2_ATRBE DNA-directed RNA polymerase subunit beta''
OS=Atropa belladonna GN=rpoC2 PE=3 SV=1
Length = 1389

Score = 234 bits (597), Expect = 1e-61
Identities = 114/118 (96%), Positives = 116/118 (98%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
MKRLISRLI+HFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 MKRLISRLIEHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMS G+
Sbjct: 83 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGA 140


>sp|Q49L08|RPOC2_EUCGG DNA-directed RNA polymerase subunit beta''
OS=Eucalyptus globulus subsp. globulus GN=rpoC2 PE=3
SV=1
Length = 1392

Score = 234 bits (596), Expect = 1e-61
Identities = 113/118 (95%), Positives = 116/118 (98%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
+KRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 IKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLILEKHHHYGNVHAVEKLRQSIE+WYATSEYLRQEMNPNFRMTDPFNPVHIMS G+
Sbjct: 83 SLILEKHHHYGNVHAVEKLRQSIEVWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGA 140


>sp|Q9THV5|RPOC2_SINAL DNA-directed RNA polymerase subunit beta''
OS=Sinapis alba GN=rpoC2 PE=1 SV=1
Length = 1384

Score = 233 bits (594), Expect = 2e-61
Identities = 113/118 (95%), Positives = 116/118 (98%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
+KRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 IKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVH+MS G+
Sbjct: 83 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHMMSFSGA 140


>sp|A4QLS3|RPOC2_NASOF DNA-directed RNA polymerase subunit beta''
OS=Nasturtium officinale GN=rpoC2 PE=3 SV=1
Length = 1379

Score = 233 bits (594), Expect = 2e-61
Identities = 113/118 (95%), Positives = 116/118 (98%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
+KRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 19 IKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 78

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVH+MS G+
Sbjct: 79 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHMMSFSGA 136


tr_hit_id A9XW65
Definition tr|A9XW65|A9XW65_CORFO DNA-directed RNA polymerase OS=Cornus florida
Align length 118
Score (bit) 236.0
E-value 6.0e-61
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916075|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_G05.
(368 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9XW65|A9XW65_CORFO DNA-directed RNA polymerase OS=Cornus flo... 236 6e-61
tr|A9XW80|A9XW80_9MAGN DNA-directed RNA polymerase OS=Heuchera s... 234 1e-60
tr|A9XW93|A9XW93_LIQST DNA-directed RNA polymerase OS=Liquidamba... 234 2e-60
tr|A9XW40|A9XW40_9MAGN DNA-directed RNA polymerase OS=Berberidop... 234 2e-60
tr|A7R9B9|A7R9B9_VITVI DNA-directed RNA polymerase (Fragment) OS... 233 5e-60
tr|A9XWB7|A9XWB7_9ROSI DNA-directed RNA polymerase OS=Staphylea ... 231 1e-59
tr|Q4FFY5|Q4FFY5_9ASPA DNA-directed RNA polymerase (Fragment) OS... 230 2e-59
tr|A9XWA9|A9XWA9_9ROSI DNA-directed RNA polymerase OS=Quercus ni... 230 2e-59
tr|A9XWC5|A9XWC5_TROAR DNA-directed RNA polymerase OS=Trochodend... 229 4e-59
tr|A9XW75|A9XW75_9ROSA DNA-directed RNA polymerase OS=Ficus sp. ... 229 4e-59
tr|A9XWA6|A9XWA6_PLUAU DNA-directed RNA polymerase OS=Plumbago a... 229 7e-59
tr|Q4FFY7|Q4FFY7_RANMC DNA-directed RNA polymerase (Fragment) OS... 228 9e-59
tr|B5LMM6|B5LMM6_CICAR RNA polymerase beta' subunit OS=Cicer ari... 228 9e-59
tr|A9XW78|A9XW78_9MAGN DNA-directed RNA polymerase OS=Gunnera ma... 228 9e-59
tr|A9QBC9|A9QBC9_ELAOL DNA-directed RNA polymerase (Fragment) OS... 227 2e-58
tr|A9QBM2|A9QBM2_MUSAC DNA-directed RNA polymerase (Fragment) OS... 227 3e-58
tr|Q4FFZ0|Q4FFZ0_ACOAM DNA-directed RNA polymerase (Fragment) OS... 226 4e-58
tr|A9QAX6|A9QAX6_9APIA DNA-directed RNA polymerase (Fragment) OS... 226 4e-58
tr|A9XWA2|A9XWA2_9ROSI DNA-directed RNA polymerase OS=Oxalis lat... 225 7e-58
tr|B7T382|B7T382_9ROSI RNA polymerase beta subunit OS=Geranium c... 224 1e-57
tr|B5AGZ9|B5AGZ9_9ROSI RNA polymerase beta' subunit OS=Gonystylu... 224 2e-57
tr|B8R492|B8R492_TRISU RNA polymerase beta' subunit OS=Trifolium... 224 2e-57
tr|A9QC90|A9QC90_TRACE DNA-directed RNA polymerase (Fragment) OS... 224 2e-57
tr|Q5QA62|Q5QA62_ACOGR DNA-directed RNA polymerase (Fragment) OS... 223 4e-57
tr|Q4FFY8|Q4FFY8_NUPAD DNA-directed RNA polymerase (Fragment) OS... 223 4e-57
tr|Q4FFY6|Q4FFY6_TYPLA DNA-directed RNA polymerase (Fragment) OS... 223 4e-57
tr|B7T3U5|B7T3U5_9ROSI RNA polymerase beta subunit OS=Monsonia s... 221 1e-56
tr|A9XW74|A9XW74_9ROSI DNA-directed RNA polymerase OS=Euonymus a... 221 1e-56
tr|B7T416|B7T416_9ROSI RNA polymerase beta subunit OS=Monsonia v... 221 2e-56
tr|A9XW98|A9XW98_9MYRT DNA-directed RNA polymerase (Fragment) OS... 221 2e-56

>tr|A9XW65|A9XW65_CORFO DNA-directed RNA polymerase OS=Cornus
florida GN=rpoC2 PE=3 SV=1
Length = 1391

Score = 236 bits (601), Expect = 6e-61
Identities = 115/118 (97%), Positives = 116/118 (98%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMS G+
Sbjct: 83 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGA 140


>tr|A9XW80|A9XW80_9MAGN DNA-directed RNA polymerase OS=Heuchera
sanguinea GN=rpoC2 PE=3 SV=1
Length = 1376

Score = 234 bits (598), Expect = 1e-60
Identities = 114/118 (96%), Positives = 116/118 (98%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVH+MS G+
Sbjct: 83 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHMMSFSGA 140


>tr|A9XW93|A9XW93_LIQST DNA-directed RNA polymerase OS=Liquidambar
styraciflua GN=rpoC2 PE=3 SV=1
Length = 1390

Score = 234 bits (597), Expect = 2e-60
Identities = 114/118 (96%), Positives = 115/118 (97%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
S ILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMS G+
Sbjct: 83 SFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGA 140


>tr|A9XW40|A9XW40_9MAGN DNA-directed RNA polymerase OS=Berberidopsis
corallina GN=rpoC2 PE=3 SV=1
Length = 1389

Score = 234 bits (597), Expect = 2e-60
Identities = 114/118 (96%), Positives = 115/118 (97%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWL QDAEQQ
Sbjct: 23 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLAQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMS G+
Sbjct: 83 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGA 140


>tr|A7R9B9|A7R9B9_VITVI DNA-directed RNA polymerase (Fragment)
OS=Vitis vinifera GN=GSVIVT00013212001 PE=3 SV=1
Length = 362

Score = 233 bits (593), Expect = 5e-60
Identities = 114/118 (96%), Positives = 115/118 (97%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 19 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 78

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMS G+
Sbjct: 79 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNTNFRMTDPFNPVHIMSFSGA 136


>tr|A9XWB7|A9XWB7_9ROSI DNA-directed RNA polymerase OS=Staphylea
colchica GN=rpoC2 PE=3 SV=1
Length = 1390

Score = 231 bits (589), Expect = 1e-59
Identities = 112/118 (94%), Positives = 115/118 (97%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
+KRLISRLIDHFGMAYTSHILDQVKTLGFQ+ATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 IKRLISRLIDHFGMAYTSHILDQVKTLGFQRATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SLI EKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMS G+
Sbjct: 83 SLIFEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGA 140


>tr|Q4FFY5|Q4FFY5_9ASPA DNA-directed RNA polymerase (Fragment)
OS=Yucca schidigera GN=rpoC2 PE=3 SV=1
Length = 1384

Score = 230 bits (587), Expect = 2e-59
Identities = 112/118 (94%), Positives = 114/118 (96%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
S ILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDP NPVH+MS G+
Sbjct: 83 SFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPSNPVHLMSFSGA 140


>tr|A9XWA9|A9XWA9_9ROSI DNA-directed RNA polymerase OS=Quercus nigra
GN=rpoC2 PE=3 SV=1
Length = 1396

Score = 230 bits (587), Expect = 2e-59
Identities = 111/118 (94%), Positives = 116/118 (98%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
+KRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 IKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
SL+LEKHH+YGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVH+MS G+
Sbjct: 83 SLVLEKHHYYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHMMSFSGA 140


>tr|A9XWC5|A9XWC5_TROAR DNA-directed RNA polymerase OS=Trochodendron
aralioides GN=rpoC2 PE=3 SV=1
Length = 1381

Score = 229 bits (585), Expect = 4e-59
Identities = 112/118 (94%), Positives = 114/118 (96%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATS+SLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSLSLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
S ILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDP NPVHIMS G+
Sbjct: 83 SSILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPSNPVHIMSFSGA 140


>tr|A9XW75|A9XW75_9ROSA DNA-directed RNA polymerase OS=Ficus sp.
Moore 315 GN=rpoC2 PE=3 SV=1
Length = 1391

Score = 229 bits (585), Expect = 4e-59
Identities = 111/118 (94%), Positives = 115/118 (97%)
Frame = -3

Query: 366 MKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQ 187
+KRLISRLIDHFGMAYTSHILDQVKTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQ
Sbjct: 23 IKRLISRLIDHFGMAYTSHILDQVKTLGFRQATATSISLGIDDLLTIPSKGWLVQDAEQQ 82

Query: 186 SLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSLLGS 13
LILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVH+MS G+
Sbjct: 83 RLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHMMSFSGA 140