BP916076
Clone id YMU001_000082_G06
Library
Length 226
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000082_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TATTCCTACAAGCCCTAAGTCTACACGAGTCCCCCTTCCTTTGCTTTTACCGTACGGGCA
TGCTGCACAGTCGATGGTCTGTAGCTTGTCGACGCACCCTATTTGAACCTTGTGGTGAGA
GCTGCTTTGTGTAAACCTGACAGCATGCAAACCTGCTCCCAAGCGGGTTGCGAACCACCA
TCCTTCCATCTCTGCTTTCCGACTCCATCTCCCTTTCCACTTGTGT
■■Homology search results ■■ -
sp_hit_id Q96AY2
Definition sp|Q96AY2|EME1_HUMAN Crossover junction endonuclease EME1 OS=Homo sapiens
Align length 52
Score (bit) 32.0
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916076|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_G06.
(226 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q96AY2|EME1_HUMAN Crossover junction endonuclease EME1 OS=Hom... 32 1.0
sp|Q96KR4|LMLN_HUMAN Leishmanolysin-like peptidase OS=Homo sapie... 29 8.2
sp|P19304|YORT_TTV1K Uncharacterized 38.7 kDa protein OS=Thermop... 29 8.5
sp|Q5NVA9|EME1_PONAB Crossover junction endonuclease EME1 OS=Pon... 29 8.5

>sp|Q96AY2|EME1_HUMAN Crossover junction endonuclease EME1 OS=Homo
sapiens GN=EME1 PE=1 SV=2
Length = 570

Score = 32.0 bits (71), Expect = 1.0
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -1

Query: 226 TQVEREMESESRDGRMVVRNPLGSRFACCQVYTKQLSPQGSNRVRRQATDHR 71
TQ R + SES D + PL R C + KQLSP+ S+ + DH+
Sbjct: 77 TQPVRLLSSESEDEEEFI--PLAQRLTCKFLTHKQLSPEDSSSPVKSVLDHQ 126


>sp|Q96KR4|LMLN_HUMAN Leishmanolysin-like peptidase OS=Homo sapiens
GN=LMLN PE=2 SV=1
Length = 655

Score = 28.9 bits (63), Expect = 8.2
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = -3

Query: 212 GDGVGKQRWKDGGSQPAWEQVCMLSGLHKAALTTRFK*GASTSYR---PSTVQHARTVKA 42
G G G+ RW+ GS + +L GL +A +T G+S R PS + V
Sbjct: 21 GSGPGRSRWRWSGSVWVRSVLLLLGGLRASATSTPVSLGSSPPCRHHVPSDTEVINKVHL 80

Query: 41 KEGGLV 24
K +V
Sbjct: 81 KANHVV 86


>sp|P19304|YORT_TTV1K Uncharacterized 38.7 kDa protein
OS=Thermoproteus tenax virus 1 (strain KRA1) PE=4 SV=1
Length = 338

Score = 28.9 bits (63), Expect = 8.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2

Query: 219 WKGRWSRKAEMEGWWFATRLGAGLHAVR 136
WK RW+ K EGW+ A LH R
Sbjct: 232 WKSRWTIKDYSEGWYQANACFLALHIPR 259


>sp|Q5NVA9|EME1_PONAB Crossover junction endonuclease EME1 OS=Pongo
abelii GN=EME1 PE=3 SV=1
Length = 575

Score = 28.9 bits (63), Expect = 8.5
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1

Query: 226 TQVEREMESESRDGRMVVRNPLGSRFACCQVYTKQLSPQGSNRVRRQATDHR 71
TQ R + S S D + PL R C + KQLSP+ S+ + DH+
Sbjct: 77 TQPVRLLSSGSEDEEEFI--PLAQRLKCKFLTHKQLSPEDSSSPIKSVLDHQ 126


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916076|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_G06.
(226 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******